LOC120575447 (LOC107083151)


Basic Information

Item Value
gene id LOC120575447
gene name LOC107083151
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13832571 ~ 13838091 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826243.1
TTTGTTTGACTACTGCACTGTGTTTTAACTGCAAGATCATCAACAGAAGAACAAATGTCTCTTTTGGAggattttgttttcttccttttctctaGTCCCACCACTTTACTGGGGGTTGTTGCTCTCTTTCTCGTCCTCTATCTTGTTGCAAGTAGTTTCACCTCCCAGGAAATGGGGAAGGAGCCCCCAGGGCCGAGGCCTCTTCCCCTGCTTGGCAACCTTTTGCAGCTTGATCTCAAGAGACCCTACAAAAGCCTCTGTGAGCTTTCAAAGAAACATGGCTCTGTATTTACGGTGTACTTTGGAACCAGTAAAGTGGTTGTTCTGTCTGGATACAAAGCAGTCAAAGAGGCTCTGGTCAGCTATGCAGATGAGTTTGGAGACAGATATGTCTCCCCTATTTTTTATGATACGAATCAAGGTCACGgaATTCTTTTTGCAAATGGAGAATCATGGAAAGAGCTGAGACGTTTTGCCCTCACCACCCTGAGGGACTTTGGGATGGGCAAAAGAGTCGCTGAGCAAAAAATCTTGGAGGAATGCCACCATCTGATCCAAATGTTTGCAAAGCATGAAGGAAAACCATTTGATACAGCATGCCCGGTGAATTATGCAACATCCAATATCATCTCCTCTATCGTGTATGGAAGCAGGTTTGACTACAGTGACCCCCGATTCAAAAACATGGTGAGAAGAGCCAACGAGACCATACGTGTTACCGGCTCTCCACAAATCCAGCTTTACAACATGTTTCCCAGGCTGGTTGGTTGGATaaaaaaccggcagctgatattaaaaaatgttgaaatgtccATCAGAGATGTCAAAGATTTAATCAGGCATCTGAAAGAGACACTAAACCCTCAGATCTGCAGGGGCCTTGTGGACTGTTTTCTTAATCGGAAGCAGAAGGAAGAGGAATCTTCAGTTATGGACACTCACTACAATGAGAAGAACTTGATATTTACAGTAACAAACCTGTTTGCTGCTGGTACTGATACCACAGCGACTACACTGAGATGGAGTTTGCTGCTTATGGCTAAATATCCACGTATACAAGATCAGGTCCAGGAGGAGCTGAGCAGGGTGGTCGGTAGCCGACAGGTCCGGGTAGAGGACAGGATGAGCCTGCCATACACTGATGCTGTAATCCATGAGACACAGAGACTGGCCAACATTGTCCCCATGTCCATTCCTCACAAAACCAGCCGAGACGTCACCTTCCAGGGCTACTTTATCAAAGAGGGGACTACTGTGTTTCCTCTTCTTACTTCTGTCCTGCATGATGAGAACGAGTGGGAGAGCCCACACACCTTCAACCCTTCCCACTTCCTGGATAAGGAGGGTAAATTCATCAGGAGAGATGCCTTCATGCCCTTTTCTGCAGGTCGCAGGGTGTGTCTTGGGGAAAGTCTGGCTAAGATGGagctcttcctcttcttcaccGCCCTCCTCCAGCGCTTTCGTTTCACTCCTCCACCTGGAGTTACAGAGGATGAACTGGATCTGACACCAGCTGTGGGCTTTATCCTCGCCCCTTCACCTCATGAGCTGTGTGCTGTCAGTCGCAATGAGGAAGAGAGCTGGAGCATGGCATTATAACTGCCTGTGCCAATGGCATGAATATTGTTTTATTCACCCTCACTAAGGCCACAACATACTGAGCAACCTGCAGATGTCCCATCCTCAAGAATACCGTCAGGGGACAGTTTATTTCAGTCACTTAGCATGAAATTACTTGAAATTGTAATgagataaataaatgtagtcACACACAGTTGGAGActatagatgttttttttgggaaattGTACACATTAGTTTAAACAAGTTGTAGGAATTTATATGGACTTTTCCAACTAGGCCACTGTTGATTGTTTTCACAAATAGATGTATTTGGTTTTGTAGGTCGTAATTTGTCAAGGGTTTAATTTCTTACTTTGCAGAAAATGGCAGAAATCATGCCATATTACATtctaaaattaattaaatttagACCTGCTTCTTGATGGCTGATACCTCATGTACATCTAAAACTACaataaactacatttatatatcaA

Function

NR:

description
PREDICTED: cytochrome P450 2K1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826243.1 True 2063 mRNA 0.44 9 13832571 13838091

Neighbor

gene id symbol gene type direction distance location
abca3b NA coding upstream 4780 13796728 ~ 13827791 (+)
ccnf ccnf coding upstream 36887 13784836 ~ 13795684 (+)
dnaja3a dnaja3,LOC102777832 coding upstream 78204 13748920 ~ 13754367 (+)
glis2b glis2,LOC102778126 coding upstream 200816 13602828 ~ 13631755 (+)
LOC120574401 NA coding upstream 371744 13454492 ~ 13460827 (+)
LOC120575448 NA coding downstream 2058 13840149 ~ 13846908 (+)
LOC120575450 rnps1,LOC104933647,LOC103363435 coding downstream 25420 13863511 ~ 13866556 (+)
LOC120575449 adap1,LOC103363436,LOC106518683,LOC108241370 coding downstream 29193 13867284 ~ 13884326 (+)
LOC120575215 sox8 coding downstream 158811 13996902 ~ 14000676 (+)
LOC120574849 rasd1,LOC101484812,LOC104918344,LOC106942351,LOC103468867,LOC103373502,LOC103140985,LOC103393006 coding downstream 209995 14048086 ~ 14049437 (+)
G154682 NA non-coding upstream 239937 13589517 ~ 13592634 (+)
G154661 LOC106942609 non-coding upstream 338710 13492585 ~ 13493861 (+)
G154639 NA non-coding upstream 347853 13484039 ~ 13484718 (+)
G154634 crebbp,LOC108247643,LOC106518707 non-coding upstream 357123 13474159 ~ 13475448 (+)
G154603 NA non-coding upstream 426877 13356223 ~ 13405694 (+)
LOC120575454 NA non-coding downstream 108515 13946606 ~ 13954723 (+)
G154777 NA non-coding downstream 211740 14049831 ~ 14056966 (+)
LOC120575155 NA non-coding downstream 269690 14107781 ~ 14241105 (+)
G154811 NA non-coding downstream 447083 14285174 ~ 14287984 (+)
G154824 NA non-coding downstream 488191 14326282 ~ 14326489 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 50886 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 62795 13769703 ~ 13769776 (+)
vasnb vasn other upstream 140268 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 806155 13016959 ~ 13026416 (+)
G154461 NA other upstream 985974 12843423 ~ 12846597 (+)
G154743 LOC102293104 other downstream 9048 13847139 ~ 13854286 (+)
si:dkey-282h22.5 NA other downstream 1143145 14981236 ~ 14984745 (+)
LOC120574428 NA other downstream 1147609 14985700 ~ 14986913 (+)
LOC120575440 LOC102304323 other downstream 1153922 14992013 ~ 14992508 (+)
G155088 NA other downstream 1297700 15135791 ~ 15139706 (+)

Expression


Co-expression Network