LOC120574706


Basic Information

Item Value
gene id LOC120574706
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12889419 ~ 12904818 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641886.1
caacaacctgggATTAGCTATGGACGAAGTtcacacagcgatacactgGTGTGTTCACATTTTCGAGCCTCAAAGAGTCCCATGCGGGCAAAGCTGGTCACCAAGGAGACAATGCCTGACAATGTTCCCCAACAACTGAGGGTGGGGGAGGTTGCTGGTAGCTGAGGACTCAAGAGGAAATACAGATGGGCTTCCCATTTTTGTCATACTGGTACACCAACATCTTGATGCAGTGGGAGTTGGCAGGATAGCTGAATAGCCCAGGAgggctttcattttttttactaaaaaaaCCATGGAAACGGCCTGGATCTGATTTATCCCACTGCTGCTTCTACCAATGCATGACCTCTGCGCGCCTGCATCAGACAGGAGGAGCACAGCTTTCGACCTCTCACGTGATACTGCACTTTGGTATGGTGTAATAAACAGGCTCATTACACgtcttctttctttgttgtcCTGTTCTGTTCCCTGCTTCCCACTGTCACCATGTGTGCACATGATTCCCAGGTGACTGTGTGAGCTTGCTTAAATGTTTCCCAAACCTGGAAGAGACTATACACAAGACAATGGCTTTGCTTACACTGTAGTGTTGCTGGGATGTAAAAGGAATAAAATCTGTTGAATGAATCATTGTAAATATCGGTACAGAGAATTCTaaatattagtattagtatagtattgtacgtcaactgttttttttaaaacaggttTAGTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641886.1 True 723 lncRNA 0.44 3 12889419 12904818

Neighbor

gene id symbol gene type direction distance location
LOC120574877 LOC103393031,LOC103469206,LOC105930142,LOC107092540,LOC104925717,LOC108239269,LOC106518725 coding upstream 16504 12864935 ~ 12872915 (+)
mfsd13al LOC104947686,LOC100692111,LOC102297699,LOC101482249 coding upstream 30261 12854029 ~ 12859158 (+)
sdr42e2 LOC103360721,LOC100712049 coding upstream 48074 12817115 ~ 12841345 (+)
mosmoa c17h16orf52,c16orf52.L,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 coding upstream 81523 12782750 ~ 12807896 (+)
LOC120574126 LOC101483500,LOC100695608,LOC102213391,LOC102786175 coding upstream 107974 12774893 ~ 12781445 (+)
proza NA coding downstream 18552 12923370 ~ 12931320 (+)
gprc5ba gprc5b,LOC103360712 coding downstream 33866 12938684 ~ 12952238 (+)
LOC120575071 dnaaf5,LOC102780779 coding downstream 518727 13423545 ~ 13448411 (+)
LOC120574400 gde1 coding downstream 543809 13448627 ~ 13454217 (+)
LOC120574401 NA coding downstream 549674 13454492 ~ 13460827 (+)
G154447 NA non-coding upstream 61842 12782774 ~ 12827577 (+)
G154410 NA non-coding upstream 154507 12734683 ~ 12734912 (+)
G154385 NA non-coding upstream 320567 12566974 ~ 12568852 (+)
G154379 NA non-coding upstream 365747 12475767 ~ 12523672 (+)
G154367 NA non-coding upstream 487436 12401730 ~ 12401983 (+)
G154494 LOC100710707 non-coding downstream 75435 12980253 ~ 12981635 (+)
LOC120574709 NA non-coding downstream 87085 12991903 ~ 12995560 (+)
G154535 NA non-coding downstream 123314 13028132 ~ 13034382 (+)
G154555 NA non-coding downstream 212576 13117394 ~ 13117721 (+)
G154586 NA non-coding downstream 329295 13234113 ~ 13234321 (+)
G154461 NA other upstream 42822 12843423 ~ 12846597 (+)
G154254 NA other upstream 774227 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 795861 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 1664170 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 1815593 11063859 ~ 11073826 (+)
LOC120574968 LOC102294452 other downstream 112141 13016959 ~ 13026416 (+)
vasnb vasn other downstream 751197 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 864201 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 864885 13769703 ~ 13769776 (+)
G154743 LOC102293104 other downstream 942321 13847139 ~ 13854286 (+)

Expression


Co-expression Network