LOC120574709


Basic Information

Item Value
gene id LOC120574709
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12991903 ~ 12995560 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641888.1
TCACAAGGGAGGGAGAAAACAGGACAAAAGAATAGGCAGTGTGTTTCCGAATGTcaaattagaagaaaaaaaattgccaTATAAACATCCCAACATATGGAAGTAGgctgaagaaagaaagaaagaaagaaagaaaaaaaaaagattctactCCACTCACTGCAATCCAAAGCCAACCattacaCACAGAGAGCCAATTATGTGCTTTCGTCCTCGCTCTGCCTCCTGCTCCAACTGGCTTTTCTCTGAACACATGACCAGGGCAGCCCCTCTCCCTCTGTATCCCGTTGGTCTGAAATTGACcagagctagtgtctcctgttaAGCATTAAGTCGAGGGGAATTACTgcGGCTCCCACGGCCCACGTCAGTGATAAAAATAGAGACGGACACTGTACTTTCAGAACAGAGGGAAGAAGACGCAGATGAAGAGACAGATGAGAGCTGCCAGAGAGCTGCCATCCATGGGGGACCTCTACACCCAGCGGTGCAGGAAGAAAGCCAAAAGCAAACCACCACAAACTGCTCTGCCTGCTGCCATCCGTGATTAACACACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641888.1 True 560 lncRNA 0.47 3 12991903 12995560

Neighbor

gene id symbol gene type direction distance location
gprc5ba gprc5b,LOC103360712 coding upstream 39665 12938684 ~ 12952238 (+)
proza NA coding upstream 60583 12923370 ~ 12931320 (+)
LOC120574877 LOC103393031,LOC103469206,LOC105930142,LOC107092540,LOC104925717,LOC108239269,LOC106518725 coding upstream 118988 12864935 ~ 12872915 (+)
mfsd13al LOC104947686,LOC100692111,LOC102297699,LOC101482249 coding upstream 132745 12854029 ~ 12859158 (+)
sdr42e2 LOC103360721,LOC100712049 coding upstream 150558 12817115 ~ 12841345 (+)
LOC120575071 dnaaf5,LOC102780779 coding downstream 427985 13423545 ~ 13448411 (+)
LOC120574400 gde1 coding downstream 453067 13448627 ~ 13454217 (+)
LOC120574401 NA coding downstream 458932 13454492 ~ 13460827 (+)
glis2b glis2,LOC102778126 coding downstream 607268 13602828 ~ 13631755 (+)
dnaja3a dnaja3,LOC102777832 coding downstream 753360 13748920 ~ 13754367 (+)
G154494 LOC100710707 non-coding upstream 10268 12980253 ~ 12981635 (+)
LOC120574706 NA non-coding upstream 87085 12889419 ~ 12904818 (+)
G154447 NA non-coding upstream 164326 12782774 ~ 12827577 (+)
G154410 NA non-coding upstream 256991 12734683 ~ 12734912 (+)
G154385 NA non-coding upstream 423051 12566974 ~ 12568852 (+)
G154535 NA non-coding downstream 32572 13028132 ~ 13034382 (+)
G154555 NA non-coding downstream 121834 13117394 ~ 13117721 (+)
G154586 NA non-coding downstream 238553 13234113 ~ 13234321 (+)
G154602 NA non-coding downstream 273359 13268919 ~ 13269290 (+)
G154603 NA non-coding downstream 360663 13356223 ~ 13405694 (+)
G154461 NA other upstream 145306 12843423 ~ 12846597 (+)
G154254 NA other upstream 876711 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 898345 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 1766654 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 1918077 11063859 ~ 11073826 (+)
LOC120574968 LOC102294452 other downstream 21399 13016959 ~ 13026416 (+)
vasnb vasn other downstream 660455 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 773459 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 774143 13769703 ~ 13769776 (+)
G154743 LOC102293104 other downstream 851579 13847139 ~ 13854286 (+)

Expression


Co-expression Network