LOC120575037


Basic Information

Item Value
gene id LOC120575037
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14330945 ~ 14337074 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641944.1
TATATTTTCACACTGCATATGAAAGAGAAGGGAAAGCCCGTCTGCCTTCACAATAAGGGTCGTTGGCCTATTTGTAGTGGACGTGGCCTTGGGTGCAGCCAGCCAGTGGCAGTCTGAGGCCTCTTTGTAGGCCGCCGAACATGCACCAAACCACAAATTATCATTGGAGCAAGACAGGCCTCCTGCACCACAACCAGGCCCACCTCTACCTCCCCGAAAGCTTTGGATTTATGGCATGTGTCCAAATAAACATGTCTGAACGTTGTGGCAGAGAGGAGCCGTGGTTGACCATGCATCTGAGAGAATCAGATCTCACACCTGTATTAGTGATGCAGCTTGCCTTGAGGAGGGAAAAGATTTCCATTCATAACCAGAGTGATGAATATGGATGCTACTGTGAtggacagaaacacatgagGTAGATCAAGGTAAAAACATGTCTCTTTGATATCAAGAGCCTTTTAATTTCTGTAATTACCAAAACTGGCACAGAGGGACTTTGAGCACTGATGGACAACCAGCTTACCAGGCAATGGGCAGTTTTTGTATATTTGCCCAGTGAGTGATTTGCAGAAAGACATCCTTGTAAAGGCCACCGTCATCCCTCTCTGAGGGCCCTCTGGGTGCTGACACCTCGTGTCTATCAACTCTAACATGGCTGTCAGCGCAGATCACACCATCCCTGCCAGCCAGTTCTCTCCTACCGCTTGCTGGTATTATACAGTATCAGCGGAGACGACCAAGAGACAAAGAACTATAGAGCAGACAAAGATGTCTTTCAGCTAATATTGACACACACTCAGTTTCATTGCATTTGAGTGCTGAAGTATAATCACCATCAGggatataatatcaataaatGCTGTGCATTGGTACACGTGGATCCTGCTGGAGGATGTTTATGTGTAGACACTGATTATTTATGTTTCAGCATGTTACCATGTTGAGGTAAggattagaggatggatacccgaaccgagctCGTCGGGACCCGGTGGTACCCGACGCGCC

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641944.1 True 1011 lncRNA 0.47 4 14330945 14337074

Neighbor

gene id symbol gene type direction distance location
LOC120575134 NA coding downstream 42126 14285174 ~ 14288819 (-)
LOC120574465 sstr2,LOC104918336,LOC102291375,LOC103373483 coding downstream 224122 14099455 ~ 14106823 (-)
LOC120575451 rab26,LOC102798624,LOC101484267,LOC100707100 coding downstream 380189 13884337 ~ 13950756 (-)
LOC120575446 LOC104960164 coding downstream 467411 13860150 ~ 13863534 (-)
hmox2b LOC103358700,LOC108247647,LOC100705244,LOC101479559 coding downstream 566409 13757750 ~ 13764536 (-)
rnf213a rnf213 coding upstream 47028 14384102 ~ 14417141 (-)
LOC120575368 NA coding upstream 82288 14419362 ~ 14427318 (-)
LOC120575370 LOC104945235 coding upstream 92947 14430021 ~ 14439111 (-)
LOC120575491 pcyt2,LOC103373415,LOC101487187 coding upstream 104729 14441803 ~ 14451655 (-)
pycr1a LOC103373386,LOC104918329,LOC106533854 coding upstream 135021 14472095 ~ 14475790 (-)
G154825 NA non-coding downstream 4009 14325973 ~ 14326936 (-)
G154788 NA non-coding downstream 231664 14078514 ~ 14099281 (-)
G154791 LOC100698953,LOC106518679,LOC103373486 non-coding downstream 243179 14085742 ~ 14087766 (-)
LOC120575453 NA non-coding downstream 384548 13936768 ~ 13946397 (-)
G154717 NA non-coding downstream 503154 13755664 ~ 13827791 (-)
G154948 LOC104962285,LOC104925065 non-coding upstream 290676 14627750 ~ 14664671 (-)
G154952 cyth1,LOC103140955,LOC102194078 non-coding upstream 296104 14633178 ~ 14636802 (-)
G154953 cyth1,LOC103392816,LOC101076412 non-coding upstream 303028 14640102 ~ 14647069 (-)
G155025 NA non-coding upstream 558305 14895379 ~ 14895624 (-)
G155039 NA non-coding upstream 626159 14963233 ~ 14963846 (-)
med9 med9 other downstream 273591 14050738 ~ 14057354 (-)
tfap4 tfap4 other downstream 699109 13589483 ~ 13631836 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other downstream 908994 13335449 ~ 13421951 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other downstream 1318164 12973260 ~ 13012781 (-)
iqck NA other downstream 1358116 12954974 ~ 12972829 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other upstream 117763 14454837 ~ 14471430 (-)
cenpx cenpx other upstream 189052 14526126 ~ 14529153 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other upstream 196608 14533682 ~ 14543994 (-)
LOC120574213 NA other upstream 428660 14765734 ~ 14790778 (-)
LOC120574214 bahcc1,LOC106528540,LOC108241329,LOC107083174 other upstream 458572 14795646 ~ 14828239 (-)

Expression


Co-expression Network