LOC120574414



Basic Information


Item Value
gene id LOC120574414
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9935671 ~ 9936281 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_844
ACATTTATGACAGAACAACTGGGACACTTTAGAAAACTTAGAAATATTCAGATCAGAAAACACTGGATTACAGTTTTTATTACAGAATGGAAAATATGATTTCATTGAGTTTATTCTTTATAGTTACTTTTCATGGAGTTTGGAGTGAGATCAAACTGGACCAGTCTCCCTCTGAGGTGAAAAGACCTGGAGAGACAGTGAAGATGTCATGTATCATATCTGGTTATAGCATGACAAGCAATGATATTCACTGGATACGACAGAGACCAGGAGAAGCTCTGGAGTGGATTGGGTGGATGAGCACAGGTTCAAACTCTGCTAGCTATGGCAGCTCCTTTCAAAGCCGTTTCATCATGACTGAAGATGTTCCCAGCAGCACTCAGTACCTCGAGGTCCAGagcctgacagcagcagattctgctgtttacttCTGTGCTCGAGAAGACACAGTGACTGAAGACAGTGGAGCAGCTGCACAAAAACCTCCACAGACAACAAACAGCAATTTGATCTTACTGTAA

Function


GO:

id name namespace
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_844 True 521 V_gene_segment 0.42 2 9935671 9936281

Neighbor


gene id symbol gene type direction distance location
LOC120574613 NA coding upstream 39822 9895289 ~ 9895849 (+)
LOC120574608 NA coding upstream 42087 9893146 ~ 9893584 (+)
LOC120574409 NA coding upstream 47704 9879302 ~ 9887967 (+)
LOC120574335 NA coding upstream 813542 9121513 ~ 9122129 (+)
LOC120574334 NA coding upstream 817455 9117670 ~ 9118216 (+)
LOC120574415 NA coding downstream 2682 9938963 ~ 9939633 (+)
LOC120574577 NA coding downstream 4242 9940523 ~ 10027725 (+)
LOC120574578 nacc1,LOC103392937,LOC103373299,LOC104936741 coding downstream 98281 10034562 ~ 10049463 (+)
ier2a NA coding downstream 119127 10055408 ~ 10056536 (+)
alkbh7 alkbh7,LOC102776873 coding downstream 220159 10156440 ~ 10159160 (+)
G153423 NA non-coding upstream 633 9921552 ~ 9935038 (+)
G153424 NA non-coding upstream 9186 9926138 ~ 9926485 (+)
G153415 NA non-coding upstream 56808 9872321 ~ 9878863 (+)
LOC120574665 NA non-coding upstream 70781 9862985 ~ 9864890 (+)
G153340 LOC108239224 non-coding upstream 220609 9658348 ~ 9715062 (+)
LOC120574664 NA non-coding downstream 11290 9947571 ~ 9953355 (+)
LOC120574581 NA non-coding downstream 36923 9973204 ~ 9974573 (+)
G153640 NA non-coding downstream 233661 10169942 ~ 10235939 (+)
G153684 NA non-coding downstream 462844 10399125 ~ 10399353 (+)
G153740 NA non-coding downstream 666136 10602417 ~ 10602964 (+)
LOC120574413 NA other upstream 1476 9931152 ~ 9934195 (+)
LOC120574623 NA other upstream 14859 9920331 ~ 9920812 (+)
LOC120574412 NA other upstream 15520 9908580 ~ 9920151 (+)
G153398 NA other upstream 15667 9919535 ~ 9920004 (+)
LOC120574588 NA other upstream 24405 9905994 ~ 9911266 (+)
LOC120574658 NA other downstream 1738 9938019 ~ 9938604 (+)
G153433 NA other downstream 129179 10065460 ~ 10066742 (+)
G153646 NA other downstream 314096 10250377 ~ 10341623 (+)
G153808 spag9 other downstream 815879 10752160 ~ 10752898 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other downstream 1127578 11063859 ~ 11073826 (+)

Expression



Co-expression Network