LOC120574428


Basic Information

Item Value
gene id LOC120574428
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14985700 ~ 14986913 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_850
CTCAGCACACACTGTCAACATGCTGGGGACCCTCTGCACTCTCATCACTGCTCTAACATGTGTGAGTGGTGTGACCGTGGTGACACAGAAGCCTCCTGTTGTCACGGTGAGGAAAGGAGAGACAGCCACCATGGACTGTGACGTTTTCACAGATGATGGATCTCGCTGGTACAAACAGAGTCCTGGAGGAGCTTTTCAGTTTGTGCTGAGGAATCATTACAGCTACTCCTCTCCACATTATGGCTCTGGTTTCTCCTCTCCCAAATTCACTTCTAGTCATCTGTCAGGGACACAGTATCGATTgaccatcagtaatgtggagGAGGGAGACTCAGCAGTCTATCACTGTGAAACATGGGATGACTCTGCTAGACTGCACGTATCACATGTCTTTATAAGCTTCACTGGACAGTAA

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_850 True 415 V_gene_segment 0.49 4 14985700 14986913

Neighbor

gene id symbol gene type direction distance location
LOC120574573 LOC104944233,LOC103373117 coding upstream 24595 14957489 ~ 14961105 (+)
LOC120575419 LOC103373137,LOC102304397,LOC102213496 coding upstream 65018 14917820 ~ 14920682 (+)
LOC120575420 LOC104944239,LOC104925055 coding upstream 70899 14908491 ~ 14914801 (+)
zgc:112148 LOC104944227,LOC103373156 coding upstream 85908 14896424 ~ 14899792 (+)
LOC120573965 NA coding upstream 90068 14891067 ~ 14895632 (+)
LOC120575438 LOC102783976,LOC102302891,LOC106674513,LOC106675063 coding downstream 6170 14993083 ~ 14998261 (+)
aatka LOC103361234 coding downstream 25880 15012793 ~ 15043696 (+)
sdk2a LOC103361238 coding downstream 204945 15191858 ~ 15276960 (+)
cdc42ep4a LOC104940296,LOC100697350,LOC103361240,LOC102780692 coding downstream 293728 15280641 ~ 15293971 (+)
LOC120575445 LOC104940295,LOC103361241,LOC104959451 coding downstream 323932 15310845 ~ 15313571 (+)
G155041 NA non-coding upstream 13910 14971522 ~ 14971790 (+)
G155040 NA non-coding upstream 14232 14971252 ~ 14971468 (+)
G155036 ccdc137 non-coding upstream 16164 14967943 ~ 14969536 (+)
G155032 LOC104944234,LOC102212559,LOC101473443,LOC102786862,LOC102303581 non-coding upstream 31399 14952333 ~ 14954301 (+)
G154982 NA non-coding upstream 155536 14829502 ~ 14830164 (+)
G155050 NA non-coding downstream 14095 15001008 ~ 15003646 (+)
G155077 NA non-coding downstream 68438 15055351 ~ 15115448 (+)
G155104 NA non-coding downstream 186179 15173092 ~ 15173363 (+)
G155180 metrnl non-coding downstream 459971 15446884 ~ 15449558 (+)
G155197 LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576 non-coding downstream 520140 15507053 ~ 15508319 (+)
si:dkey-282h22.5 NA other upstream 955 14981236 ~ 14984745 (+)
G154743 LOC102293104 other upstream 1131414 13847139 ~ 13854286 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 1204015 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 1215924 13769703 ~ 13769776 (+)
vasnb vasn other upstream 1293397 13656015 ~ 13692303 (+)
LOC120575440 LOC102304323 other downstream 5100 14992013 ~ 14992508 (+)
G155088 NA other downstream 148878 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 380007 15366920 ~ 15404605 (+)
arl16 arl16 other downstream 523180 15510093 ~ 15512810 (+)
rasd2 NA other downstream 539941 15526854 ~ 15528470 (+)

Expression


Co-expression Network