G169447


Basic Information

Item Value
gene id G169447
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28396980 ~ 28399180 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229804
TTGAATGAATTTAAATTAGGTTATTCGAAGTTtcgaataataataatttgaataATGAAGGATTGTGCAATGTTAAACTAACTAGTTTGCCTTCCGGCCGTTTTAAAGGTCCAACTAGTAATACATGTTTGTAGAGTAGTGTGCTAGGTGAGCTAGTTAGTTAGCATTCTAACCCTGTGAGGTCACAAATGTCGGTgatgaatgaaaaagaaaaactgtgttCATCGGTGATTTGAGCTCTTTGTTTGCCATTCAAAGTGGTTAGCTAGCTCTGTGACGCCGACTCAAATCATTGAGAGCACGTGTGGCTCCGCAGCAGCTCAGCCTCAGGTGAATGTTTATAGAACTccattttgatttcattttgtACCTCCTCTTTCGCTGGCCTGGGTCGTCACCCTGCGATAGAAAGCGTGTTTGGCTGAAACAGTGCTCTGATCACTTGAACGGCAGTGAAAAGGAGAATCTCAGCGTCATGATTAGGCCCAGGCTGCCACCGTCAAGACTTGGGCACTGTccccaacagaccccgttgctctggacggagaccagtgaagtctattagaagcacttttccggtgatggccagctttaccgcgccgcctccaactgagagagacaacgtaaatgtgacgtgaacaacctgtctgaaagttggaagtcttctggtagctgtgccaagagaaatctcaatcattcccaatcttacagagacggagagcgtaggtatatgtaaggagatagcATGGGCACAAGCTAATTATTGctcactaaaatgctagttaacattagtaattaaacctaaacagctcatgtgagttgaaactgcctgcaagcttctcctgtactatacggtaattcctctactatgtgacacaatcgttagcctatttttacaaaagcttttgctacggagccataacgtgaggtacagggtaatggagccttttatacattgtcgtgtttctttacaactaaacaatggacaaatagagtctttaaacgcttcagatgtaaagttattcgctgtcaagtgacaccaaaatgaatgctagtcagtggaatgctaacgggaggtgatggccaggtagcaacaaaatggcgccataggaggttcgagttctgaagcttacccccttgcttaGAAACGGGGAGTGCAGCGCTTTGCAGTTCCTCTGTTAATCTTGGCCTCAGTATCCTTCAGTGAATCCGAATGGGAAAGCATTTCACCTACCGTGTTTAGGGATTGATGTTCACACAGGCAGGGACGTTTATGCATAAAACCCAGAGATTATCGTGGGTGCTGGGGATTGTAAAGCTTTATACTGCATCTTTATTTAATTGTTCAGTAAAAGAGTTGGTAATGTTGTACAGGATAAATGAATATCTTAATGTGAAGTTGTCTAAAATGTTGTATACGCAGTTTGAAATCTAGCAAAATTCATTtaataatgtttttcttttgcgTTTGTTCCTTCTCCCTGCTGAGGATGATGTGAAGTGAAAGGCTGTTTGAACCACAAACATTTGTGATGGGATGTTCTAACTTAACAGACCCAAACGGaatctgcagattttttttttatttaggtttttacagttttcagcggTGATACAGGATGAAAATTTAGCGTTTTTTCatttaattttgacatcATTTGAcatctgtaaaaaacaaaaaaatgaaaatctgcagaaaatTCGCCCAAAATTCCCTCTTGTCCTGCTTATTAGCTTAAAATGGTTGACCTCTCATCACATTCTAATGAGAATGTTGCCAGCTTtacaagtgtgtgtttgtacggACATTTGTCAGTCATGTTGTCGTCTTTATCGTTGGTGCATTATTGGCATTCCCCTGCTGTCAGAGGAGGccgctcatttttttttttcatctattattattattattattattattattattattattaaaatactGCTTGTATTTAAATATTTGCACTTTTCCACTTACAGATGCATATTAAAGTTCTTGAGAATACATATAACACTACTGGTACCTGCCAGCCGTTTAACATTGTACAGTTAAtgatcaagaaaaaaaaaaaaacctgtggtCCATCTGTAAACGACCGTGCTtactgtgtatctgtctgttgtGTCAGTCTCCTGTGCTTTTGATGCCAATCTGCATGTCACCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229804 True 2164 lncRNA 0.40 2 28396980 28399180

Neighbor

gene id symbol gene type direction distance location
dhx33 dhx33,LOC103370271 coding downstream 29519 28358777 ~ 28367461 (-)
LOC120544092 c1qbp coding downstream 40425 28348616 ~ 28356555 (-)
hspb1 hspb1 coding downstream 184861 28207663 ~ 28212119 (-)
hsf5 NA coding downstream 363364 28028351 ~ 28033616 (-)
mtmr4 NA coding downstream 476715 27875127 ~ 27920265 (-)
camkk1a camkk1 coding upstream 187 28399367 ~ 28470511 (-)
atp2a3 atp2a3 coding upstream 76733 28475913 ~ 28539128 (-)
zzef1 zzef1 coding upstream 195244 28594424 ~ 28632819 (-)
ankfy1 ankfy1 coding upstream 236533 28635713 ~ 28653484 (-)
ruvbl2 ruvbl2 coding upstream 375633 28774813 ~ 28782861 (-)
G169417 NA non-coding downstream 39603 28357011 ~ 28357377 (-)
G169402 NA non-coding downstream 66009 28330652 ~ 28330971 (-)
G169399 NA non-coding downstream 162031 28234590 ~ 28234949 (-)
G169387 ssc4d non-coding downstream 193227 28163135 ~ 28203753 (-)
G169289 NA non-coding downstream 602192 27790056 ~ 27794788 (-)
G169524 NA non-coding upstream 300641 28699821 ~ 28704621 (-)
G169550 NA non-coding upstream 354095 28753275 ~ 28755551 (-)
G169551 NA non-coding upstream 358363 28757543 ~ 28761645 (-)
G169612 cltc non-coding upstream 445244 28844424 ~ 28849113 (-)
G169620 cltc non-coding upstream 466301 28865481 ~ 28867088 (-)
LOC120575713 mlxipl other downstream 49490 28314169 ~ 28347490 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other downstream 83847 28217243 ~ 28313133 (-)
LOC120544668 tspoap1 other downstream 274362 28047607 ~ 28122618 (-)
LOC120544024 rnf43 other downstream 369203 27930539 ~ 28027777 (-)
gusb gusb other downstream 650522 27718999 ~ 27746458 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other upstream 255697 28654877 ~ 28664051 (-)
atp5l atp5l,LOC102215954 other upstream 405198 28804378 ~ 28808441 (-)
LOC120544028 LOC107730113 other upstream 1363269 29762449 ~ 29796427 (-)
LOC120543707 c2cd2 other upstream 1483626 29882806 ~ 29901937 (-)
map6a map6,LOC102787944,LOC103142112 other upstream 1546488 29945668 ~ 29971080 (-)

Expression


Co-expression Network