ube2g1a (ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369)


Basic Information

Item Value
gene id ube2g1a
gene name ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28654877 ~ 28664051 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229887
GACGAAGAAGAACCTGCAGCAGTAGCAGGAGAAGAGCTGAACAAAAACCCAGTGGAAGGATTCTCAGCAGGCCTTATCGAGGACAACGATCTCTACAGATGGGAAGTCCTCATCATCGGGCCTCCAGACACACTGTATGAAGGTGGTGTGTTTAAAGCTCATCTGACATTTCCCAAAGACTACCCTCTCAGGCCACCTAAAATGAAATTTATCACAGATATTTGGCACCCTAATGtTGACAGGAATGGAGAtgtatgtatttctattttgcaCGAGCCTGGGGAGGACAAGTACGGCTATGAGAAACCTGAAGAGCGCTGGCTGCCTATCCACACAGTGGAAACCATCATGATTAGTGTTATCTCTATGCTGGCAGACCCAAATGGTGACTCACCAGCCAATGTGGATGCTGCAAAAGAGTGGAGGGAGGACAGACACGGCGCATTCAAAAGGAAAGTTGCCCGCTGTGTACGAAAAAGCCAAGAGACTGCGTTTGAGTGATATTTGGCAAGGATCTAGCTTCATGTTTTCAGGGTCTCCAATTGAAAATCAACATGGCACTGTTTCCTGCACTCTTCCACCCTGTCGCCAGGCTAGTCCTCCTTTTGTTTTGGCACGAACAGACTGGCTACTGTAGGCTGCAATAGAACATAACAGTGACTACCAAggctgacagaaaaaaaaaaaaaatgccaagcAAGTGCCAactcaaaaaacaacaacaacaatacccAGAAGAtgataaaacatttttcaagTCTATGAACTGCTTCAACATTCAGGAAGATATTGTAAAGACGTGTATATAGCACAGACTAAACCGGATAATATATAAGCTCCTTCCATCCATCAAGACACTTAGACCAAATGAATAGTGCTGGTTGAGATAGATTCTGTGTCCATTTTTCCTCTCTCAACTCCAGCATGCATTAGTTCTCTTTAGATTGTTTGAACAGGTCTTAAATATAAAGAGAATTGTGATGCTGTTGGAGGAAAGTCACCTGTGAAGAGCTTGATTGGTTCAAGCGAGATGAATGACGTGACTGATGGAGGGAATACCGCCATATTAGAATACGCAGCTGTTCTTTAACACTCTCAAAACTCAACTTCATAAGTGTACCTGTATGATTTTGGTTTTCTTTATCCGTTATAAGTCTTAACCATCCTGCTCACTCCACTGAAGAAAGGCAACATACCCCTTCATATGTGTGCATGCTCAATTTTGTTAATCTTTTTTCGAAAGTGCCTCCTAATAAAATGCTTGGCCACTTCACCCTGCATTGAACAAGtgttcaaaaatgttgaaaaaaaaggagTACCACCTATGTATTTAATAGCCAGTACACAAGGAGTCTGTATAATTAGCGTATTACAACAATTTGGTGTAGCAATAACGCCCCTTGTATGAAGTGTACACATGTTAAGTTTTGATATCCTGATCCAATTTGAGGTCCTCTTCTCCAATAATCTATTTTAACAGCCTCTcttttctgtgttgtctttggTAG
>XM_039778344.1
aagaagaagaatgacGAGAATGCTAAACGGAAAATAGAGGGGACGAAGTACAGTTTGGTGAACGATAAATTAAGGCTGTTATCTCAACATATTACAATTGAACATTGCTGCATTGCATTTGCTAAACTATGACAGAGCCTCAGTCAGTGCTGTTACTCAGGAGACAGCTTGCAGAGCTGAACAAAAACCCAGTGGAAGGATTCTCAGCAGGCCTTATCGAGGACAACGATCTCTACAGATGGGAAGTCCTCATCATCGGGCCTCCAGACACACTGTATGAAGGTGGTGTGTTTAAAGCTCATCTGACATTTCCCAAAGACTACCCTCTCAGGCCACCTAAAATGAAATTTATCACAGATATTTGGCACCCTAATGtTGACAGGAATGGAGAtgtatgtatttctattttgcaCGAGCCTGGGGAGGACAAGTACGGCTATGAGAAACCTGAAGAGCGCTGGCTGCCTATCCACACAGTGGAAACCATCATGATTAGTGTTATCTCTATGCTGGCAGACCCAAATGGTGACTCACCAGCCAATGTGGATGCTGCAAAAGAGTGGAGGGAGGACAGACACGGCGCATTCAAAAGGAAAGTTGCCCGCTGTGTACGAAAAAGCCAAGAGACTGCGTTTGAGTGATATTTGGCAAGGATCTAGCTTCATGTTTTCAGGGTCTCCAATTGAAAATCAACATGGCACTGTTTCCTGCACTCTTCCACCCTGTCGCCAGGCTAGTCCTCCTTTTGTTTTGGCACGAACAGACTGGCTACTGTAGGCTGCAATAGAACATAACAGTGACTACCAAggctgacagaaaaaaaaaaaaaatgccaagcAAGTGCCAactcaaaaaacaacaacaacaatacccAGAAGAtgataaaacatttttcaagTCTATGAACTGCTTCAACATTCAGGAAGATATTGTAAAGACGTGTATATAGCACAGACTAAACCGGATAATATATAAGCTCCTTCCATCCATCAAGACACTTAGACCAAATGAATAGTGCTGGTTGAGATAGATTCTGTGTCCATTTTTCCTCTCTCAACTCCAGCATGCATTAGTTCTCTTTAGATTGTTTGAACAGGTCTTAAATATAAAGAGAATTGTGATGCTGTTGGAGGAAAGTCACCTGTGAAGAGCTTGATTGGTTCAAGCGAGATGAATGACGTGACTGATGGAGGGAATACCGCCATATTAGAATACGCAGCTGTTCTTTAACACTCTCAAAACTCAACTTCATAAGTGTACCTGTATGATTTTGGTTTTCTTTATCCGTTATAAGTCTTAACCATCCTGCTCACTCCACTGAAGAAAGGCAACATACCCCTTCATATGTGTGCATGCTCAATTTTGTTAATCTTTTTTCGAAAGTGCCTCCTAATAAAATGCTTGGCCACTTCACCCTGCATTGAACAAGtgttcaaaaatgttgaaaaaaaaggagTACCACCTATGTATTTAATAGCCAGTACACAAGGAGTCTGTATAATTAGCGTATTACAACAATTTGGTGTAGCAATAACGCCCCTTGTATGAAGTGTACACATGTTAAGTTTTGATATCCTGATCCAATTTGAGGTCCTCTTCTCCAATAATCTATTTTAACAGCCTCTcttttctgtgttgtctttggTAGGAATTGCTATGCatgatttattgtatttttttttttttttttttgctgaatatTTCTGGGATTTTGTTTGCGAATGTTTGAGTGtttgtgtatacagtatgtgtgcccATTTTGTTTTGTCGTTTTTTCCCCTGATCCACGATCTCACAATTACTCTGCTCACTGAAGTATGGCAGTTTTGCCTAATGTACAAAGACAAAAATACGGATGTATATTTTTCATGTTATGAAACCTGTCACCTGTAGTGAGTTCTTctaaaatatgactttttttcaatatt

Function

symbol description
ube2g1a Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Orthologous to human UBE2G1 (ubiquitin conjugating enzyme E2 G1).
ube2g1 Enables ubiquitin conjugating enzyme activity and ubiquitin protein ligase binding activity. Involved in protein K48-linked ubiquitination and protein K63-linked ubiquitination. Acts upstream of or within cellular protein catabolic process. Located in extracellular exosome.

NR:

description
ubiquitin-conjugating enzyme E2 G1

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process
GO:0004842 ubiquitin-protein transferase activity molecular_function

KEGG:

id description
K10575 UBE2G1, UBC7; ubiquitin-conjugating enzyme E2 G1

RNA

RNA id representative length rna type GC content exon number start site end site
TU229887 False 1508 TUCP 0.42 6 28655157 28664051
XM_039778344.1 True 1928 mRNA 0.40 6 28654877 28664011

Neighbor

gene id symbol gene type direction distance location
ankfy1 ankfy1 coding downstream 1393 28635713 ~ 28653484 (-)
zzef1 zzef1 coding downstream 22058 28594424 ~ 28632819 (-)
atp2a3 atp2a3 coding downstream 115749 28475913 ~ 28539128 (-)
camkk1a camkk1 coding downstream 184366 28399367 ~ 28470511 (-)
dhx33 dhx33,LOC103370271 coding downstream 287416 28358777 ~ 28367461 (-)
ruvbl2 ruvbl2 coding upstream 110762 28774813 ~ 28782861 (-)
ftr83 LOC104966638,LOC103395195,LOC103359484,LOC102224482 coding upstream 121051 28785102 ~ 28791118 (-)
pdzd3b NA coding upstream 147332 28811383 ~ 28815558 (-)
ptrh2 ptrh2 coding upstream 211939 28875990 ~ 28877885 (-)
rnft1 rnft1 coding upstream 307417 28971468 ~ 28977378 (-)
G169447 NA non-coding downstream 255697 28396980 ~ 28399180 (-)
G169417 NA non-coding downstream 297500 28357011 ~ 28357377 (-)
G169402 NA non-coding downstream 323906 28330652 ~ 28330971 (-)
G169399 NA non-coding downstream 419928 28234590 ~ 28234949 (-)
G169387 ssc4d non-coding downstream 451124 28163135 ~ 28203753 (-)
G169524 NA non-coding upstream 35770 28699821 ~ 28704621 (-)
G169550 NA non-coding upstream 89224 28753275 ~ 28755551 (-)
G169551 NA non-coding upstream 93492 28757543 ~ 28761645 (-)
G169612 cltc non-coding upstream 180373 28844424 ~ 28849113 (-)
G169620 cltc non-coding upstream 201430 28865481 ~ 28867088 (-)
LOC120575713 mlxipl other downstream 307387 28314169 ~ 28347490 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other downstream 341744 28217243 ~ 28313133 (-)
LOC120544668 tspoap1 other downstream 532259 28047607 ~ 28122618 (-)
LOC120544024 rnf43 other downstream 627100 27930539 ~ 28027777 (-)
gusb gusb other downstream 908419 27718999 ~ 27746458 (-)
atp5l atp5l,LOC102215954 other upstream 140327 28804378 ~ 28808441 (-)
LOC120544028 LOC107730113 other upstream 1098398 29762449 ~ 29796427 (-)
LOC120543707 c2cd2 other upstream 1218755 29882806 ~ 29901937 (-)
map6a map6,LOC102787944,LOC103142112 other upstream 1281617 29945668 ~ 29971080 (-)
ei24 ei24 other upstream 1619029 30283080 ~ 30294530 (-)

Expression


Co-expression Network