G169550


Basic Information

Item Value
gene id G169550
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28753275 ~ 28755551 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU229929
acacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtgtgcacACATAGACATATATGTTCACACTCATGCAGACACGCTGCTGTGTTCCAGAAACACAACAGCCGCACATCATACAAACAATGGTAATACCTTGAACAGGAGGATTAGAGGATTCTCCAAAACAGGGATGAACCATTTCCTTCAATTATAAGTGTCAGTTGTTGCTGTTAACTGTGAATTGTTTATGAGCCAAACTTAAAATTAAATTGCTCAAATGCCAGTGTGACATGGAGACAATTAAAGCTGCGAATGCTTTGTTGCGCGAGATTGGCCTGCCTCCTAGCCTCCTTCACTATTACTGTGCTGGAGACTGTTGTCCTCTCAAGCAAAGGGGAGGTGTGATTGGTCTGGCAAGTGGATGAACTCTAATCAAACCGACTTGTAGTGGTTTTTGGCTGGGAGGATGCAAATCATGATGGCTGACATTGCTATAGCTTTGATTGGCTTCTCATTTGAGGACGGATGGAGAAAGCAGTAAATGGTTTGGTAGACGCGACCGAAGACGCTTCACTGTAAAGAGGGGCACTGACTGAGTTCTTCCTTTTCACGTATTCATTGGACTATGAAAGAGGAAGGTCTGAAAGATTAGGGCCTTTCTAAATGCATCGTCAGCTACACAGGTCACATCAGAGCCTggctgtactgtgtgtgtatatactgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtctgtggtcACTGCCCATGAGCCCACTCAGCTCTGCTGACTGAGGACTCGGAACTTTTGTTGAATGATAAGCGTGCGAAGAAGGAAAGTATGTGCCTGCAGCTGTATAAACACTTTTAACAATTAAAGTTTGGACAGCAGGGACTAAATCGGAGTTTGACCTCGTGGTGTGAGATTCCCTCCCCGTGTAATATGGGATTGTGGTTACTGAATAAATGAGTGCGAAGCTCTGCTGTCAGATCTCATGCTGATCTTTTGACAGCGCCCAGCTTGGGGATGTCCTCTTGTTATCACGCGGCGTGGGGTGAATCTGGTCAGCGGAGGCTGGTTCCTCCTGCAGAGGAAGTTAATTGGATCGCAGTGTATCAGATCTCCGTCTGGGATTGCATCACCGGAGATTAATAGCTCGCGATGTATAACAGCTTAGGCGATTACTGCCTCTCTTCATCCTCATTTATTCAGCGGCCGTGTGTCTTTTCTCTCCTACTCTAAATTCCTCTCCTTCACTTCCACCCGCTCGCTAGAGCCAAACACTTTTTCTGTAATGTAAATGGTCTCCTTTAATCTACCGCAGCACTTCACAACGGCATCTGTGTTCTTTTACCTCCTTACGTTTCTTTCTTAATTGTTTCTCAGAGCAGCGGGTTAGTAAGTGTTTGGACTGCAACACTTCACATCATATCAGAGAGCAGATGAACTGTGAACTGTATTGATCTGTGAGTCAGACCCAAGGGAGGAAATATTGCCTGTCACTGATTGGATTACCCCCCAAAAGAAATAATGTGTTGATAATCAATCACCACTGAGCGCCTCGGTGGTTCACTTAAGAATAGATGTGATCAGGTTTGCAGGCAGATTCAACTCTGACCTCACGTATCTGTAATCACTGCTCTCTATAATTAGCCCTGTTTGACAGCAGGGAGAAAATGCTTTAGTCgctgtgtgtgacagagaacTGATGAAACCCTCAGGCTGAGAGCATAAAGTGCCGCTGAAACCTGATGTGTGGCAGCCATGTGGGAGCCTTTCATGTCACCTGTCGTTAGCTGTGCATACTAATGTCACCCTGCCAATGGTAATGACACTGCAGTACTTGCAGTAAAAGACCACACTGGTGGTTTTGCATAttatagccatactgagaaatccagagagagttgtgtggagttGATAGTCTTagttagctttgtatcaactcattgggcaatggcttgaatgtaacagacgtccattattataaaaaagttacgcactaaagctatAACTACCTTACAAGTTGTTTTTTCAGAATATTTCTCCagaatatttagaatattttagaTTGATTTCCTGCCTTCAAGACAGCCATTGCCTCCTATTCATTAGTGCACAATGCAAATCAACTTGCAGAGCTTTCAGACTTGCTTGTGATGGGTAATCCATcacacttttacttttttggGCCTATGTTTGACTAGATTATGTGGTTAAGCAGCTGCAAGCATGAAGTGTTTGGAACAGTCTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229929 True 2277 lncRNA 0.44 1 28753275 28755551

Neighbor

gene id symbol gene type direction distance location
ankfy1 ankfy1 coding downstream 99791 28635713 ~ 28653484 (-)
zzef1 zzef1 coding downstream 120456 28594424 ~ 28632819 (-)
atp2a3 atp2a3 coding downstream 214147 28475913 ~ 28539128 (-)
camkk1a camkk1 coding downstream 282764 28399367 ~ 28470511 (-)
dhx33 dhx33,LOC103370271 coding downstream 385814 28358777 ~ 28367461 (-)
ruvbl2 ruvbl2 coding upstream 19262 28774813 ~ 28782861 (-)
ftr83 LOC104966638,LOC103395195,LOC103359484,LOC102224482 coding upstream 29551 28785102 ~ 28791118 (-)
pdzd3b NA coding upstream 55832 28811383 ~ 28815558 (-)
ptrh2 ptrh2 coding upstream 120439 28875990 ~ 28877885 (-)
rnft1 rnft1 coding upstream 215917 28971468 ~ 28977378 (-)
G169524 NA non-coding downstream 48654 28699821 ~ 28704621 (-)
G169447 NA non-coding downstream 354095 28396980 ~ 28399180 (-)
G169417 NA non-coding downstream 395898 28357011 ~ 28357377 (-)
G169402 NA non-coding downstream 422304 28330652 ~ 28330971 (-)
G169399 NA non-coding downstream 518326 28234590 ~ 28234949 (-)
G169551 NA non-coding upstream 1992 28757543 ~ 28761645 (-)
G169612 cltc non-coding upstream 88873 28844424 ~ 28849113 (-)
G169620 cltc non-coding upstream 109930 28865481 ~ 28867088 (-)
G169640 NA non-coding upstream 190759 28946310 ~ 28946656 (-)
G169648 NA non-coding upstream 243929 28999480 ~ 28999737 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other downstream 89224 28654877 ~ 28664051 (-)
LOC120575713 mlxipl other downstream 405785 28314169 ~ 28347490 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other downstream 440142 28217243 ~ 28313133 (-)
LOC120544668 tspoap1 other downstream 630657 28047607 ~ 28122618 (-)
LOC120544024 rnf43 other downstream 725498 27930539 ~ 28027777 (-)
atp5l atp5l,LOC102215954 other upstream 48827 28804378 ~ 28808441 (-)
LOC120544028 LOC107730113 other upstream 1006898 29762449 ~ 29796427 (-)
LOC120543707 c2cd2 other upstream 1127255 29882806 ~ 29901937 (-)
map6a map6,LOC102787944,LOC103142112 other upstream 1190117 29945668 ~ 29971080 (-)
ei24 ei24 other upstream 1527529 30283080 ~ 30294530 (-)

Expression


Co-expression Network