G169766


Basic Information

Item Value
gene id G169766
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 29778692 ~ 29789550 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230223
aaaaaagtctcagaagtgaatttaataacgaaatagcccaacaaacaatgtataactttgcagtgtctgaaatatgagacctgctgtccagtctcccatatgtttctatgtagtttgttcaaaccaatcagcgcgtagctcattctgaatattcatgagcataccatatttgtaagaaaagctcttgttccaaatagagccatattcacagggtagttaagggcctaataaaatagcattcgggcaatttttagcccaaccaatgttacataccccattaggagaccttaaggaacagtgtaaaataccctatataatcattctaacACCCCTTTAAGGCGTTTTTTGGCGTGGGCTGTACAGCAAATGGACTATCTGCAGCTAGTGCGGTTGCTTCAGTGGTATATCATCGTGGCTGTTAGCGACTGTATAACGGCAGACCATCTGTGGATTGTCAGCACTGAAGACTGCAGGAGGGGGGAGAGTCTTTGTGTAGCACTGAGGAAGGCAGCCGCTGGAAGCAGTAAGACAGAGAAAGTCTGACTCCCACCAGGCAGACATATTGACATCTCGTATCACACACACTGCTATATCACATTAATACACGTTGTATTTGTCCccataattcaattaaaaaccAGATTTATCATATTTTTTTGCCACAACATTCCCCCTTTGTGACTATAGAGTCACATTCTTTAGCATAAATCTGGTGCTTGTCAGAGTTTGTTACTGCAGTATACATAATGGTGGTCTTTGGCCAGAGTGATTATTAAATGATGGCTATCACTAAACAAACTTTTAAGAAAGTGTAAAATGACAATGACACATCTACGGAACCTTGCTCGGGATTAACATGAAACACAATTATGACGCCTTTGAGGCCAACTAACAAATGTTTTTTCCTAGGCACACATGGTTATAATGTACTTCACATATGTTGGATGCTGTACAGCTTATACTGATTGTTGTTAACCTATCTCTTACTGCCCTCCTGTGAtctgtaagttaataggactcTGATGTGGTGTACAATCATTTCTGACTAACCATATACTGTTGAAACTCAAGCAACACTTGATTGTGACCTCACGTAATTATGATTTTTAACAAAAATTCACACAATACTTGATGTGAGATTTTCCAGCTCTTGACCCGCTAAAAATCCTTCAAATCCAGTTGCTTCATTTTACGTGATCTGACAAACATTAATATGGCTTATCAATTCCAGTTATTTTCTTCCAGTGATAGTGATATAACGAATATATAATGATATAACAATATGACATACATTGTTGTTTCAGTGACATAACCATGATTTCCCTTTTTACTTAACCAGTGGTGTGAGTCCAGTGCATTTGACAGATTGTCCAGTGCTTTCATCTGAGGTTTGTTTTGCAAAGGTGATGGGTAACCCGGATACTTTACACATCGTAGAGGGCCCCCGAGAGGTTTGCCCTCTTACTCTTGTAGGTTGGTCTCCGTTTTATCACTCACTCTTCTCAACCTTTGGTGCATCTCCAAGGATTGATCCTGTTGACTCATGCGATGGGTAATCTGTGCCACTGAGGACGCTGCTTGCACCTCTGCATATTCTTTGGCACTATGGGCTTTCTTTATCTCCTCATCCTGTGCCCCAATGATCTCCAGGCACTGGTCATGATCCTTTGCAATACTCCTCAGGTTTTTACGTTGCTCGATTTGATTGCGTTTGTAGCTCTGTACTTGCTGTGTTCTTCTCAGAGTGCGATAATAATGGGTGTCTGTAGGTGATAGTTCTTTCATCATCCTCCTGAAACTTTCTGCTGGCATGGTCATCATTGGACTGTCCCATTCAGGCACTGGTAATGCTGGTGTCATGTTGGCAGCTTGTGGGGCTGTGGACATGTTCCCCTGCATTTCAGCCATGGTGCTGTCATCACTATCCACCGTAGTGTCTGATGATTCGACGTCCCCATCTGCTTGGTCCTCAGGTCTGGTCATCTCTCCTTCTGGGCTGTCTCTCGGTCCCGGTTTTGGCACTGGTTCTGCTACGGTTGGGTGCTGTAGGTTTGGTTCCTACTGGAGCTGGGATTGGGAGGTTGTGGTGCCTGGTCCCTACTGGCTGCGGCGGGCCTAGTTCCTGGATCATCTGGGCCCTGTTTGGTTGGGATGCATGGTTGACCTCAGCCCATGGCAGAGCCAGGGTGTCGACCGTACTTCTCATCTGTCGAGCATTTCCCATAACTAGAGCTCCAATTGATGTTTTCTGCCATATTTGTCTATTGATAAGAAATCAGAGTTAGTCACCATTCGATTGTaaaatttcaatttcatttgtTGGGTTAGTCATGCACTGAGTTCGTTAGCATGGGAGGGTGTCAGCCTGCTGAGTCAAAAGGAAGTTTCCACTGGACATTCGTCATATATTTGTGTTACAGCCTATCAGTTGTCATTTTGTCTCATTAGTGGGTTCTAGTTTCATGTTCACATAGAGTTCCTCGATTGAACGGTTAATGGTTAGTATTTCATAATACTGATCTGAACCTTCCTGATTCAGCTCCTTCCTATCTTCCATCATCTTGCTCTCAGAGCCTATATACACTGGGAACCGTCCTGTAACTACTGTAAGATTTTATTCTAAAATGTGACCGATGACCGGTCTGGCCCTAAAAAGGCCAgacttaatctgactccaattctatggtcactgaagagtgttcgtttactggtagatcagaggAAAAGACTCAGGATTCAAATTAAGACTCAAGATTCgtccagttaaagttaataagctttagtgaatgatattgcaaaatacaaaaaagtgtATGCATACGGATCAGATTACTTCAAGACAAAACAGCCTATTGCTACAACCTAGCAAACAGACAGAGTTTCCCCCAGCATCTGATGCCGGCTAACCCAGAACCTTCACCTTTTATTCCCTTTCTGTGCTTCATCCTGCTGTTATCAGTTGGGTATAGTCCAGATCTTCTGGCTCCAGCCGGCTAACGATATGTAACACACTGTATGAAAACATGACCCTGAGTTCTCTCATTCACAGCTCAACAGAAACAAGTCGCTATTGTTGGGTCCGAACACCTGTATGTTTTTAATCTCCTACAAACTAAGGAGTTTCCTGAGAGCCAGGTCATTTTCATACTCTGTGTCACAAATCACGCGCTTGCAAAACACTGACCATTGTTGCCTCGTCCCCCCGATCAGAGAAGACCTTTTTTTCTCAGGCAATAAGCTCAGACTCCCTTTATAATGTTAAATCACTGTAAAACCAGATGGCCTCTCATAACCCTGGGAAACAAGGCAACAAAGTCAGCATCATGAACTCTACAAACCTGTTACCCTTACTCTCACAAATATATTCTTACACATTGCATTGGGATAATCGTGCAGCATTCCTCATCATATCacaagctatgtttccatcgacccgtttcCATCCGAACCAAGcaatatcgaatgaaaaatgccttatggaaacagaaAAACCCGACTGAACCTCATGAACatcgactcaaagaaaatacgCTCGCTCCCATTGGACCCTCCCCCGATCGATATACGGCTCATgcaataaacgctgatggaaacgttatttgccgaacaAATAATGGATTGCGATTaggttttaggtcattttatggttgcaacctgcaataaaacaaagaagaagaagcctcAGCTCATCTCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230223 True 3696 lncRNA 0.43 2 29778692 29789550

Neighbor

gene id symbol gene type direction distance location
btg3 LOC102786047 coding downstream 17017 29755727 ~ 29761675 (-)
cxadr cxadr coding downstream 30109 29707207 ~ 29748583 (-)
rnft1 rnft1 coding downstream 801314 28971468 ~ 28977378 (-)
ptrh2 ptrh2 coding downstream 900807 28875990 ~ 28877885 (-)
pdzd3b NA coding downstream 963134 28811383 ~ 28815558 (-)
c16h21orf91 LOC102786549,LOC102292364,LOC101464061,LOC103361253 coding upstream 17295 29806845 ~ 29826242 (-)
ripk4 ripk4 coding upstream 44040 29833590 ~ 29850225 (-)
prdm15 prdm15,LOC102786849 coding upstream 60235 29849785 ~ 29879284 (-)
zbtb21 zbtb21 coding upstream 114978 29904528 ~ 29912667 (-)
LOC120544725 LOC794378,LOC106676715 coding upstream 131337 29920887 ~ 29923512 (-)
LOC120544741 NA non-coding downstream 99827 29668382 ~ 29678865 (-)
G169678 NA non-coding downstream 628214 29149084 ~ 29150478 (-)
G169648 NA non-coding downstream 778955 28999480 ~ 28999737 (-)
G169640 NA non-coding downstream 832036 28946310 ~ 28946656 (-)
G169620 cltc non-coding downstream 911604 28865481 ~ 28867088 (-)
LOC120544726 NA non-coding upstream 135517 29925067 ~ 29926453 (-)
G169905 NA non-coding upstream 256591 30046141 ~ 30115419 (-)
G169912 LOC103363040,LOC108244715 non-coding upstream 475000 30264550 ~ 30266434 (-)
G169927 NA non-coding upstream 562323 30351873 ~ 30365637 (-)
G169928 NA non-coding upstream 598304 30387854 ~ 30388055 (-)
atp5l atp5l,LOC102215954 other downstream 970251 28804378 ~ 28808441 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other downstream 1114641 28654877 ~ 28664051 (-)
LOC120575713 mlxipl other downstream 1431202 28314169 ~ 28347490 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other downstream 1465559 28217243 ~ 28313133 (-)
LOC120544668 tspoap1 other downstream 1656074 28047607 ~ 28122618 (-)
LOC120543707 c2cd2 other upstream 93256 29882806 ~ 29901937 (-)
map6a map6,LOC102787944,LOC103142112 other upstream 156118 29945668 ~ 29971080 (-)
ei24 ei24 other upstream 493530 30283080 ~ 30294530 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other upstream 517299 30306849 ~ 30341246 (-)
si:ch73-1a9.3 NA other upstream 621679 30411229 ~ 30414735 (-)

Expression


Co-expression Network