G169912 (LOC103363040,LOC108244715)


Basic Information

Item Value
gene id G169912
gene name LOC103363040,LOC108244715
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30264550 ~ 30266434 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230416
GGCGGAGTGATAAAGGTGCATTTGAGACTGATGCTATTCTATTTctagaatagaaaaaaaaacattactctTTAGGATGAGTTAATAATTCTTTATTGCAGTGCATTTGGCAATATtgtcaatattaaaataaaatagtgttaagtgataatattttaaaatataacagCAATAATTCATTGATCGGACACATTCAAATGAGATTATTAAAACATTCTAAAAAGTGTCAGTACATAGTGTCcattttgtatattattttaaacTGCACATTTACAGAGCTCCTCACAGTCTGGGCTGATCTGGCAGATCTTCCAGCAGTGCGTGGTTTTTTCTGTAGATGTAGGCGTTGGCGGCGTTGCCGTCATCCAGCTGCACCAGCTCAGCCAGCGAGGACACACAGGGGTCGTGATCGGCCAGCATCGCCGGCAGGCGGGACGACGTGCGCTCGATGCGGCAGGAACGGCGCACTGGGGTCAGAAACTTCACATCTTTGATGTTGCTCTTTTTTCTGGACGTACTTGTGCTGGCCTCGTCTTCAATTGCCTTCTTCACACTAAAGAGGggacCTTTGCAGGTACGGAGTAGTCTTCACACTGTACTTTATTACTGAAGCATCCTCCATCTGTGGCACGGTCTCCAtcacaacatcatcatcatcatcactttcTACTTCCTCATCCGTCTCCACTTTCTGGTCACTACTTTCTTCTACTCCATCCTTCACTTGCTCAACCTTTGGCTTCTCGCCCTCCTTCCCGCGCATTTCCTCCTCCTTCCACTCCTCTGTTTTACATTCATCCTTCTGTTTGCCGTCCTCCATTTCAACATTATTGCACACATCCGTCACCTGTGGAAGCTCTAATGGAGACAAAAATGACAGGGTGACTGTGAGAAGCATCTGGACAGAGTGCTACAACAACTGCAGACACAATAACCCATTAGTAATCTTTCTGGAATACCAGCAACCTGAGtagatctttttttaaataaaaaaggaacagaCCTAATAATTCCAACCTAAGATTTCCCAAATGCACCACTCTACATCAAACCAATTGTAGTGGACAGCCACTGGTGGACTTACCGTCCTCATATGGAAAGGCATCCAAAGCAG

Function

NR:

description
PREDICTED: cytoskeleton-associated protein 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230416 True 1114 lncRNA 0.43 2 30264550 30266434

Neighbor

gene id symbol gene type direction distance location
thap12a NA coding downstream 3356 30256061 ~ 30261194 (-)
si:dkey-250d21.1 LOC103363043,LOC104956247 coding downstream 10200 30239106 ~ 30254350 (-)
wnt11 wnt11 coding downstream 36385 30214539 ~ 30228165 (-)
LOC120544725 LOC794378,LOC106676715 coding downstream 341038 29920887 ~ 29923512 (-)
zbtb21 zbtb21 coding downstream 351883 29904528 ~ 29912667 (-)
stt3a stt3a coding upstream 1163 30267597 ~ 30282064 (-)
dscama NA coding upstream 244290 30510724 ~ 30624394 (-)
tmprss2 LOC104945283 coding upstream 410665 30677099 ~ 30683688 (-)
acat1 acat1 coding upstream 421992 30688426 ~ 30696741 (-)
mmp30 NA coding upstream 430932 30697366 ~ 30701630 (-)
G169905 NA non-coding downstream 149131 30046141 ~ 30115419 (-)
LOC120544726 NA non-coding downstream 338097 29925067 ~ 29926453 (-)
G169766 NA non-coding downstream 475000 29778692 ~ 29789550 (-)
LOC120544741 NA non-coding downstream 585685 29668382 ~ 29678865 (-)
G169678 NA non-coding downstream 1114072 29149084 ~ 29150478 (-)
G169927 NA non-coding upstream 85439 30351873 ~ 30365637 (-)
G169928 NA non-coding upstream 121420 30387854 ~ 30388055 (-)
G169941 NA non-coding upstream 162414 30428848 ~ 30429056 (-)
G169956 NA non-coding upstream 184113 30450547 ~ 30452506 (-)
G170054 NA non-coding upstream 462568 30729002 ~ 30731888 (-)
map6a map6,LOC102787944,LOC103142112 other downstream 293470 29945668 ~ 29971080 (-)
LOC120543707 c2cd2 other downstream 362613 29882806 ~ 29901937 (-)
LOC120544028 LOC107730113 other downstream 468123 29762449 ~ 29796427 (-)
atp5l atp5l,LOC102215954 other downstream 1456109 28804378 ~ 28808441 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other downstream 1600499 28654877 ~ 28664051 (-)
ei24 ei24 other upstream 16646 30283080 ~ 30294530 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other upstream 40415 30306849 ~ 30341246 (-)
si:ch73-1a9.3 NA other upstream 144795 30411229 ~ 30414735 (-)
LOC120575604 NA other upstream 451781 30718215 ~ 30732082 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other upstream 471131 30737565 ~ 30830309 (-)

Expression


Co-expression Network