G169927


Basic Information

Item Value
gene id G169927
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30351873 ~ 30365637 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230438
CACAGAGACAGGAAATAGAGCCCTGCACgggcttaaaggagaattccggacGATTTTTACCTGAATCTTGATTGCTAGATTTCTCGAAGGCGGCGACGGGGGAGAAAGCAGAAGCGAGGTTGCAGGTCGGGCCCGCTAGcccggctaaggaaactaccacacagacCTCCACTGCCaagcctcctactcaccaaTGCCAGATCCATCCCACACAAAATGGCGGAGCTGGAACTCAGCATAGCAAGGAACAActacacacggaactgctgcTTGATGATTATCACCGAAACCTGGCTGAACCCCCTCATCCCGGACGCCGCTGTGCAGCTACCAGgctgagctagctaccggcaggatcgagacaagGTTCGGATCCGGAGGATGCAAACAGCTACAGGCCAATCTCCAACCTTCCATTCCTAAGTAAAATCCTGGAAAAAGCAGTTGCCGCCCAAGTCCATCAGCATATGTTCAACCATGAGCTCTGTGAACCCCTTCAGTCAGGATTCAGACCATATCATACAGAGACCGCCTTCATCAAAATCACAAATGATCTGCTCACCACTGCTGACTCTGGACACATCAGCATACTCCTTTCTCCtcgaaggcttgtatcatgtggacgcgccgacagtgttgttgtcattacttagaattcctcatgtgggcgacagaaactacgcaatATAGCTTTAAAACAATGTCAAATGAGTAGGCTAATGTGTTAAGTGGCTGTACGTTTTCTTAATCAGAAACAGAAGATTTATTGTGATTGTGCAAAATGAACAATGGAATTTTTAGCAGCAGTTCACCCAGTAttataaatctaaatctaaaagacaagaaataaatacattggaaagaaatatacaaaatgtatatacacacagaatttgaaagaaatatatacacaacaatagaaagaaatatacacactaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230438 True 942 lncRNA 0.45 2 30351873 30365637

Neighbor

gene id symbol gene type direction distance location
stt3a stt3a coding downstream 69809 30267597 ~ 30282064 (-)
thap12a NA coding downstream 90679 30256061 ~ 30261194 (-)
si:dkey-250d21.1 LOC103363043,LOC104956247 coding downstream 97523 30239106 ~ 30254350 (-)
wnt11 wnt11 coding downstream 123708 30214539 ~ 30228165 (-)
LOC120544725 LOC794378,LOC106676715 coding downstream 428361 29920887 ~ 29923512 (-)
dscama NA coding upstream 145087 30510724 ~ 30624394 (-)
tmprss2 LOC104945283 coding upstream 311462 30677099 ~ 30683688 (-)
acat1 acat1 coding upstream 322789 30688426 ~ 30696741 (-)
mmp30 NA coding upstream 331729 30697366 ~ 30701630 (-)
LOC120575605 LOC104951202 coding upstream 336863 30702500 ~ 30709341 (-)
G169912 LOC103363040,LOC108244715 non-coding downstream 85439 30264550 ~ 30266434 (-)
G169905 NA non-coding downstream 236454 30046141 ~ 30115419 (-)
LOC120544726 NA non-coding downstream 425420 29925067 ~ 29926453 (-)
G169766 NA non-coding downstream 562323 29778692 ~ 29789550 (-)
LOC120544741 NA non-coding downstream 673008 29668382 ~ 29678865 (-)
G169928 NA non-coding upstream 22217 30387854 ~ 30388055 (-)
G169941 NA non-coding upstream 63211 30428848 ~ 30429056 (-)
G169956 NA non-coding upstream 84910 30450547 ~ 30452506 (-)
G170054 NA non-coding upstream 363365 30729002 ~ 30731888 (-)
LOC120543896 NA non-coding upstream 422832 30788469 ~ 30791876 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other downstream 10627 30306849 ~ 30341246 (-)
ei24 ei24 other downstream 57343 30283080 ~ 30294530 (-)
map6a map6,LOC102787944,LOC103142112 other downstream 380793 29945668 ~ 29971080 (-)
LOC120543707 c2cd2 other downstream 449936 29882806 ~ 29901937 (-)
LOC120544028 LOC107730113 other downstream 555446 29762449 ~ 29796427 (-)
si:ch73-1a9.3 NA other upstream 45592 30411229 ~ 30414735 (-)
LOC120575604 NA other upstream 352578 30718215 ~ 30732082 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other upstream 371928 30737565 ~ 30830309 (-)
LOC120543892 LOC103394800 other upstream 481361 30846998 ~ 30851054 (-)
G170098 NA other upstream 591864 30957501 ~ 30958498 (-)

Expression


Co-expression Network