si:ch73-1a9.3


Basic Information

Item Value
gene id si:ch73-1a9.3
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30411229 ~ 30414735 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230450
TAACGTCTCGCTGCGCTGTATTAGACTGGACTGGTACAGCTTTATCcagaatatactgtatttcctcTTGTATCGAGTAACgtttagctctgttttgttttacacAAACCAACCATGCCTAAAAGGAGCAAAtcaGGAGAAGAATCAGCGcccaAGAGGAGATCTGTAAGGTTAAGCGATAGACCTGCAACTGCAAAGGCAGAGGCCAAACCTAAGCCAAAGAAGGCACCTGCTAAGCCTAAGAAAGCAAAGGAGGTGGAGAAGGCCAAGCCTGAGGAGAAAGCACCAGAGGCCCCCGCTGAGAATGGCGAAGCCAAAGCCGAGGAAGAGGCACCGGCTACAGACGCAGCTGAAGAAAAAGATGAGGCAGCAGAATAACGTCGCTCAAACCACATCTTTTACCAGTGCTCCCTGTACCTCTTTTCTTGTACAATTCAGGGGAATATTTTTATCAACTATTTTCTAAATACAGGTTTTTTAGTAGTTTGATTGTAgagaacacttttttttaaatgaaaaaaacaacaaaaaaagtcattttggAGTCGGGAATTTCGTCACATCCCACAATTTTGCATCGCCATAAAAGTTGCGGTCATTGTTGTTACTGTCAGTGGATTTCATTTCAGTTTTAAATGTGAAGGAGGGGGGAGGGTGCAGGACAGGTTACCGTGTCAACGCGCAAGCACAACGTTCACAGGAGCTGGGACAACAACCGGAAGAGCGTGTCCGCGGGGACTACATTCCATATGCTTTATAAGGGACAGTGTATGTAATCTGTGCCGGGGTGGGGATGGACAAAGTCACAGGGCAActcattgttttattgtttataatGAAGAACAGTGTTTTAGAATGTTTGTAAGCTTTGTTCCTATATGTTAACTCTTGTACTCATGCCATTTTTCTTAATGAATCTGATCAATAAAGCTAAAATCCCTATTACTGGAGCTCTCCCTATTAGAGCTGTGCATCGCTAGTTTGGTTGTGTCTCTGTTCTGTGATAGCATCGCAATAACTTTGTAAAGCTGCTGTGAAAAGGGTTTTCAATCTTTCTATATGCAGTGGGTAGTGGTACATTGTAAGGATGGTAAAAATGGAATTTGTTTTCGTAGCCAAGCTAATGAGGTGTgtaaccattaaaaaaaaaaaaaaaacctgttgaGACTGGCTTCTTAAAGGCCAACAAACAAAACTGTACATTTATTTGAGATGTCAAATGCATACCAGCAGTAGCAATATTCATGTGGGTTTTAGATCTCTGTATCAAGTACAAGTGTGCAGTTCCTTATTTGTTTATAGATGTACCTGTGTAATGATTGTTATCAACGAACCAATAA
>XM_039777667.1
aatcCAATCCGGTTTGAGCTAGTTCTTCTTCCAATGGAACATTAACGTCTCGCTGCGCTGTATTAGACTGGACTGGTACAGCTTTATCcagaatatactgtatttcctcTTGTATCGAGTAACgtttagctctgttttgttttacacAAACCAACCATGCCTAAAAGGAGCAAAtcaGGAGAAGAATCAGCGcccaAGAGGAGATCTGTAAGGTTAAGCGATAGACCTGCAACTGCAAAGGCAGAGGCCAAACCTAAGCCAAAGAAGGCACCTGCTAAGCCTAAGAAAGCAAAGGAGGTGGAGAAGGCCAAGCCTGAGGAGAAAGCACCAGAGGCCCCCGCTGAGAATGGCGAAGCCAAAGCCGAGGAAGAGGCACCGGCTACAGACGCAGCTGAAGAAAAAGATGAGGCAGCAGAATAACGTCGCTCAAACCACATCTTTTACCAGTGCTCCCTGTACCTCTTTTCTTGTACAATTCAGGGGAATATTTTTATCAACTATTTTCTAAATACAGGTTTTTTAGTAGTTTGATTGTAgagaacacttttttttaaatgaaaaaaacaacaaaaaaagtcattttggAGTCGGGAATTTCGTCACATCCCACAATTTTGCATCGCCATAAAAGTTGCGGTCATTGTTGTTACTGTCAGTGGATTTCATTTCAGTTTTAAATGTGAAGGAGGGGGGAGGGTGCAGGACAGGTTACCGTGTCAACGCGCAAGCACAACGTTCACAGGAGCTGGGACAACAACCGGAAGAGCGTGTCCGCGGGGACTACATTCCATATGCTTTATAAGGGACAGTGTATGTAATCTGTGCCGGGGTGGGGATGGACAAAGTCACAGGGCAActcattgttttattgtttataatGAAGAACAGTGTTTTAGAATGTTTGTAAGCTTTGTTCCTATATGTTAACTCTTGTACTCATGCCATTTTTCTTAATGAATCTGATCAATAAAGCTAAAATCCCTATTACTGGAGCTCTCCCTATTAGAGCTGTGCATCGCTAGTTTGGTTGTGTCTCTGTTCTGTGATAGCATCGCAATAACTTTGTAAAGCTGCTGTGAAAAGGGTTTTCAATCTTTCTATATGCAGTGGGTAGTGGTACATTGTAAGGATGGTAAAAATGGAATTTGTTTTCGTAGCCAAGCTAATGAGGTGTgtaaccattaaaaaaaaaaaaaaaacctgttgaGACTGGCTTCTTAAAGGCCAACAAACAAAACTGTACATTTATTTGAGATGTCAAATGCATACCAGCAGTAGCAATATTCATGTGGGTTTTAGATCTCTGTATCAAGTACAAGTGTGCAGTTCCTTATTTGTTTATAGATGTACCTGTGTAATGATTGTTATCAACGAACCAATAAAACTCTGTTGGTAGTTGTTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230450 False 1340 TUCP 0.41 6 30411251 30414693
XM_039777667.1 True 1404 mRNA 0.41 6 30411229 30414735

Neighbor

gene id symbol gene type direction distance location
stt3a stt3a coding downstream 129165 30267597 ~ 30282064 (-)
thap12a NA coding downstream 150035 30256061 ~ 30261194 (-)
si:dkey-250d21.1 LOC103363043,LOC104956247 coding downstream 156879 30239106 ~ 30254350 (-)
wnt11 wnt11 coding downstream 183064 30214539 ~ 30228165 (-)
LOC120544725 LOC794378,LOC106676715 coding downstream 487717 29920887 ~ 29923512 (-)
dscama NA coding upstream 95989 30510724 ~ 30624394 (-)
tmprss2 LOC104945283 coding upstream 262364 30677099 ~ 30683688 (-)
acat1 acat1 coding upstream 273691 30688426 ~ 30696741 (-)
mmp30 NA coding upstream 282631 30697366 ~ 30701630 (-)
LOC120575605 LOC104951202 coding upstream 287765 30702500 ~ 30709341 (-)
G169928 NA non-coding downstream 23174 30387854 ~ 30388055 (-)
G169927 NA non-coding downstream 45592 30351873 ~ 30365637 (-)
G169912 LOC103363040,LOC108244715 non-coding downstream 144795 30264550 ~ 30266434 (-)
G169905 NA non-coding downstream 295810 30046141 ~ 30115419 (-)
LOC120544726 NA non-coding downstream 484776 29925067 ~ 29926453 (-)
G169941 NA non-coding upstream 14113 30428848 ~ 30429056 (-)
G169956 NA non-coding upstream 35812 30450547 ~ 30452506 (-)
G170054 NA non-coding upstream 314267 30729002 ~ 30731888 (-)
LOC120543896 NA non-coding upstream 373734 30788469 ~ 30791876 (-)
G170078 NA non-coding upstream 473271 30888006 ~ 30889575 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other downstream 69983 30306849 ~ 30341246 (-)
ei24 ei24 other downstream 116699 30283080 ~ 30294530 (-)
map6a map6,LOC102787944,LOC103142112 other downstream 440149 29945668 ~ 29971080 (-)
LOC120543707 c2cd2 other downstream 509292 29882806 ~ 29901937 (-)
LOC120544028 LOC107730113 other downstream 614802 29762449 ~ 29796427 (-)
LOC120575604 NA other upstream 303480 30718215 ~ 30732082 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other upstream 322830 30737565 ~ 30830309 (-)
LOC120543892 LOC103394800 other upstream 432263 30846998 ~ 30851054 (-)
G170098 NA other upstream 542766 30957501 ~ 30958498 (-)
G170463 NA other upstream 1786974 32201709 ~ 32202206 (-)

Expression


Co-expression Network