LOC120543890 (LOC103370389,LOC108247974,LOC103394800,LOC106674904)


Basic Information

Item Value
gene id LOC120543890
gene name LOC103370389,LOC108247974,LOC103394800,LOC106674904
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30737565 ~ 30830309 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230595
AACCCAGACACCTTTGTTCTGCCACGGGATGATGTCAACGGCATCCAGTCTCTCTATGGTCCAAACCCTGATACGGATGGAGATATAGATAAACCTgagccccccaccacccccgaTGCCTGTGATTCAACCCTGGTCCTGGATGCTGTCGCCACCCTGCGAGGAGAGATGCTCTTCTTCAAGGACAACTTCTTCTGGCGGAGCTACCCTCAGAGCAATACACCTCAGCAAACTCTCATCACAAACTTCTGGCCCGAAGCCCCCGCCCACATCGACGCTGCTTATGAAAGCCAACAGTCAGACAGACTCCTTCTCTTTAAAGGTCGGAGAGTGTGGGCTTTCAGTGGCTATGATCTTGTGAGAGGCTATCCTAAACCAATTTCCAGTTTTGGTCTGCCCAAAAGAGTGAAGAAAATCGATGCGGC
>TU230603
AGAGCTACCTGAAGAAATTCTTCAACCTAAAAGAGGAGAAAGGTCCCACTAGCAGACGTGGGGTCAGCGCGGTGAGCAGGAAGCTGAGTGAGATGCAGAGATTCTTTGGCCTCCATATCACCGGGACTCTGGATGCTGACACCATGACGATGATGAAGAAGCCCCGCTGTGGCGTCCCAGACACCAACATTGCCAGTTTCTCCACGTTTGAAAGAAACCTGAAGTGGGAGAAAAACAGCCTTACCTACAGGATAGAGAACTACACATCTGACATGTCTGTGCAAGAGGTAGATGACTCCATAGAAAAAGCGCTGCAGGTTTGGGCCAAAGTCACTCCTCTGAGATTCACAAGAATCCAAAGTGGCACCGCTGACATCATGATCTCCTTTGGCCGCCAAGAACATGGTGATTTTTACCCTTTTGATGGCCCTGATGGCACTCTTACCCATGCCTTCCCCCCGGGCACTGGCATTGGAGGAGATGCTcattttgatgatgatgagtcCTTTACTTTCCGCTCAAATACCGG
>XM_039777252.1
CTCCTCAGCCTTTATAACAGCTGCCTGCAGCTCAGAAACACAGGTTGTATTCAACGAAACATGAAGACTTTCAATCTGTGCATTCTAGTGAGCCTGGCTGTCGCAGTTTACTGCGTGCCAATATCGCATGTTACTGGGCAAGATGAGGATTTTGCAGAGAGCTACCTGAAGAAATTCTTCAACCTAAAAGAGGAGAAAGGTCCCACTAGCAGACGTGGGGTCAGCGCGGTGAGCAGGAAGCTGAGTGAGATGCAGAGATTCTTTGGCCTCCATATCACCGGGACTCTGGATGCTGACACCATGACGATGATGAAGAAGCCCCGCTGTGGCGTCCCAGACACCAACATTGCCAGTTTCTCCACGTTTGAAAGAAACCTGAAGTGGGAGAAAAACAGCCTTACCTACAGGATAGAGAACTACACATCTGACATGTCTGTGCAAGAGGTAGATGACTCCATAGAAAAAGCGCTGCAGGTTTGGGCCAAAGTCACTCCTCTGAGATTCACAAGAATCCAAAGTGGCACCGCTGACATCATGATCTCCTTTGGCCGCCAAGAACATGGTGATTTTTACCCTTTTGATGGCCCTGATGGCACTCTTACCCATGCCTTCCCCCCGGGCACTGGCATTGGAGGAGATGCTcattttgatgatgatgagtcCTTTACTTTCCGCTCAAATACCGGCTACGTCCTCTTCCTGGTGGCTGCCCATGAGTTTGGCCACTCCCTGGGCTTGTCTCACTCTGATGATCCTGGTGCTCTCATGTACCCTGTGTACTCATACAATAACCCAGACACCTTTGTTCTGCCACGGGATGATATCAACGGCATCCAGTCTCTCTATGGTCCAAAACCTGATACGGATGGAGATATAGATAAACCTcagccccccaccacccccgaTGCCTGTGATTCAACCCTGGTCCTGGATGCTGTCGCCACCCTGCGAGGAGAGATGCTCTTCTTCAAGGACAACTTCTTCTGGCGGAGCTACCCTCAGAGCAATACACCTCAGCAAACTCTCATCACAAACTTCTGGCCCAAAGCCCCCACCCACATCGACGCTGCTTATGAAAGCCAACAGTCAGACAGACTCCTTCTCTTTAAAGATCGGAGAGTGTGGGCTTTCAGTGGCTATGATCTTGTGAGAGGCTATCCTAAACCAATTTCCAGTTTTGGTCTGCCCAAAAGTGTCAAGAAAATCAATGCGGCCCTCTATGACGTGGAATCTGCCAAGACTCTGTTCTTTGTAGGCACCTCTTACTACAGTTATGATGAGGCCAAGAAGACCATGGACCAGGGATTCCCCAAGCCAGTGGATCAGACGTTCTCCGGCCTGACCAGCAAAGTGACTGCAGCTCTCCAGGTCAAAGGTTTTACTTACATCTACAGCGGATCGTACATGTTTGAGTACAGCCTGAGCACCGGGAGGTTGTTCCGTGTGCTGAGGAACAGCTACTTCCTGCACTGCTCTAACTTCTAGAGAAGTTTACTGGCC
>XM_039777253.1
CTCCTCAGCCTTTATAACAGCTGCCTGCAGCTCAGAAACACAGGTTGTATTCAACGAAACATGAAGACTTTCAATCTGTGCATTCTAGTGAGCCTGGCTGTCGCAGTTTACTGCGTGCCAATATCGCATGTTACTGGGCAAGATGAGGATTTTGCAGAGAGCTACCTGAAGAAATTCTTCAACCTAAAAGAGGAGAAAGGTCCCACTAGCAGACGTGGGGTCAGCGCGGTGAGCAGGAAGCTGAGTGAGATGCAGAGATTCTTTGGCCTCCATATCACCGGGACTCTGGATGCTGACACCATGACGATGATGAAGAAGCCCCGCTGTGGCGTCCCAGACACCAACATTGCCAGTTTCTCCACGTTTGAAAGAAACCTGAAGTGGGAGAAAAACAGCCTTACCTACAGGATAGAGAACTACACATCTGACATGTCTGTGCAAGAGGTAGATGACTCCATAGAAAAAGCGCTGCAGGTTTGGGCCAAAGTCACTCCTCTGAGATTCACAAGAATCCAAAGTGGCACCGCTGACATCATGATCTCCTTTGGCCGCCAAGAACATGGTGATTTTTACCCTTTTGATGGCCCTGATGGCACTCTTACCCATGCCTTCCCCCCGGGCACTGGCATTGGAGGAGATGCTcattttgatgatgatgagtcCTTTACTTTCCGCTCAAATACCGGCTACGTCCTCTTCCTGGTGGCTGCCCATGAGTTTGGCCACTCCCTGGGCTTGTCTCACTCTGATGATCCTGGTGCTCTCATGTACCCTGTGTACTCATACAATAACCCAGACACCTTTGTTCTGCCACGGGATGATATCAACGGCATCCAGTCTCTCTATGGTCCAAAACCTGATACGGATGGAGATATAGATAAACCTcagccccccaccacccccgaTGCCTGTGATTCAACCCTGGTCCTGGATGCTGTCGCCACCCTGCGAGGAGAGATGCTCTTCTTCAAGGACAACTTCTTCTGGCGGAGCTACCCTCAGAGCAATACACCTCAGCAAACTCTCATCACAAACTTCTGGCCCAAAGCCCCCACCCACATCGACGCTGCTTATGAAAGCCAACAGTCAGACAGACTCCTTCTCTTTAAAGATCGGAGAGTGTGGGCTTTCAGTGGCTATGATCTTGTGAGAGGCTATCCTAAACCAATTTCCAGTTTTGGTCTGCCCAAAAGTGTCAAGAAAATCAATGCGGCCCTCTATGACGTGGAATCTGCCAAGACTCTGTTCTTTGTAGGCACCTCTTACTACAGTTATGATGAGGCCAAGAAGACCATGGACCAGGGATTCCCCAAGCCAGTGGATCAGACGTTCTCCGGCCTGACCAGCAAAGTGACTGCAGCTCTCCAGGTCAAAGGTTTTACTTACATCTACAGCGGACCGTACATGTTTGAGTACAGCCTGAGCACCGGGAGGTTGTTCCGTGTGCTGAGGAACAGCTACTTCCTGCGCTGCTCTAACTTCTAGAGCAGTTTACTGGCC
>XM_039777254.1
CTCCTCAGCCTTTATAACAGCTGCCTGCAGCTCAGAAACACAGGTTGTATTCAACGAAACATGAAGACTTTCAATCTGTGCATTCTAGTGAGCCTGGCTGTCGCAGTTTACTGCGTGCCAATATCGCATGTTACTGGGCAAGATGAGGATTTTGCAGAGAGCTACCTGAAGAAATTCTTCAACCTAAAAGAGGAGAAAGGTCCCACTAGCAGACGTGGGGTCAGCGCGGTGAGCAGGAAGCTGAGTGAGATGCAGAGATTCTTTGGCCTCCATATCACCGGGACTCTGGATGCTGACACCATGACGATGATGAAGAAGCCCCGCTGTGGCGTCCCAGACACCAACATTGCCAGTTTCTCCACGTTTGAAAGAAACCTGAAGTGGGAGAAAAACAGCCTTACCTACAGGATAGAGAACTACACATCTGACATGTCTGTGCAAGAGGTAGATGACTCCATAGAAAAAGCGCTGCAGGTTTGGGCCAAAGTCACTCCTCTGAGATTCACAAGAATCCAAAGTGGCACCGCTGACATCATGATCTCCTTTGGCCGCCAAGAACATGGTGATTTTTACCCTTTTGATGGCCCTGATGGCACTCTTACCCATGCCTTCCCCCCGGGCACTGGCATTGGAGGAGATGCTcattttgatgatgatgagtcCTTTACTTTCCGCTCAAATACCGGCTACGTCCTCTTCCTGGTGGCTGCCCATGAGTTTGGCCACTCCCTGGGCTTGTCTCACTCTGATGATCCTGGTGCTCTCATGTACCCTGTGTACTCATACAATAACCCAGACACCTTTGTTCTGCCACGGGATGATATCAACGGCATCCAGTCTCTCTATGGTCCAAAACCTGATACGGATGGAGATATAGATAAACCTcagccccccaccacccccgaTGCCTGTGATTCAACCCTGGTCCTGGATGCTGTCGCCACCCTGCGAGGAGAGATGCTCTTCTTCAAGGACAACTTCTTCTGGCGGAGCTACCCTCAGAGCAATACACCTCAGCAAACTCTCATCACAAACTTCTGGCCCAAAGCCCCCACCCACATCGACGCTGCTTATGAAAGCCAACAGTCAGACAGACTCCTTCTCTTTAAAGATCGGAGAGTGTGGGCTTTCAGTGGCTATGATCTTGTGAGAGGCTATCCTAAACCAATTTCCAGTTTTGGTCTGCCCAAAAGTGTCAAGAAAATCAATGCGGCCCTCTATGACGTGGAATCTGCCAAGACTCTGTTCTTTGTAGGCACCTCTTACTACAGTTATGATGAGGCCAAGAAGACCATGGACCAGGGATTCCCCAAGCCAGTGGATCAGACGTTCTCCGGCCTGACCAGCAAAGTGACTGCAGCTCTCCAGGTCAAAGGTTTTACTTACATCTACAGCGGATCGTACATGTTTGAGTACAGCCTGAGCACCGGGAGGTTGTTCCGTGTGCTGACGAAAAGCTACTTCATGCGCTGCTCTAACTTCTAGAGTAGTTACTGGTTTATGTAGCAactctgaatgaa
>XM_039777255.1
ATGAGGTCTTGCAGTCTGTGCATCATCCTGAGCCTGGCGGTGGCAGTTTACTCGCGGCCTGTATCACAAGTCACTGAGCAAGATGAACATGATGCAGAGAGCTACCTGAAAAGATCTTTCAACCTAACAGAGGAGAAAGGTCCAACTGGCAGACGGGGGGTCAGCGCGGTGAGCAGGAAGCTGAGTGAGATGCAGAGATTCTTTGGCCTCCAGATCGCTGGGACTCTGGATGCTGACACCATTGCGACGATGAAGAAGCCCCGCTGTGGCGTCCCAGACACCAACATTGCCAGTTTCTCCACGTCTGGAAGTAACCTCAAGTGGGAGAAAAACAGCCTTACCTACAGGATAGAGAACTACACACCTGACATGTCTGTGTCAGAGGTAGATAACTCCATAGAGAAAGCGCTGCAGGTTTGGGCCAAAGTCACTCCTCTGAGATTCACAAGAATCCAAAGTGGCACCGCTGACATCATGATCTCCTTTGGTCGCCAAGAACATGGTGATTATTACCCCTTTGATGGCCCTGGTGGATTTCTTGCCCATGCCTTCCCCCCAGGCCCTGGCACTGGAGGAGATGCTcattttgatgatgatgagaacTTCACTTTCCGCTCAAATACCGGCTACGTCCTCTTCCTCGTGGCTGCCCATGAGTTTGGCCACTCGCTGGGCTTGTCTCACTCTGATGATCCTGGTGCTCTCATGTACCATACGTACTCATACAGAAACCCAGACACCTTTGTTCTGCCACGGGATGATGTCAACGGCATCCAGTCTCTCTATGGTCCAAACCCTGATACGGATGGAGATATAGATAAACCTgagccccccaccacccccgaTGCCTGTGATTCAACCCTGGTCCTGGATGCTGTCGCCACCCTGCGAGGAGAGATGCTCTTCTTCAAGGACAACTTCTTCTGGCGGAGCTACCCTCAGAGCAATACACCTCAGCAAACTCTCATCACAAACTTCTGGCCCGAAGCCCCCGCCCACATCGACGCTGCTTATGAAAGCCAACAGTCAGACAGACTCCTTCTCTTTAAAGGTCGGAGAGTGTGGGCTTTCAGTGGCTATGATCTTGTGAGAGGCTATCCTAAACCAATTTCCAGTTTTGGTCTGCCCAAAAGAGTGAAGAAAATCGATGCGGCCCTCTATGACGTGGAATCTGCCAAGACTCTGTTCTTTGTAGGCAGATTTTACTACAGTTATGATGAGGCCAAGAAGACCATGGACCAGGGATTCCCCAAGCGAGTGGATCAGACGTTCTCCGGCCTGAGCGGCAAGGTGACTGCAGCTCTCCAGGTCAAAGGTTTTACTTACATCTACAGCGGACCGTACATGTTTGAGTACAGCCTGAGCACCGGGAGGTTGTTCCGTGTGCTGAGGAACAGCTACTTCCTGCGCTGCTCTAACTTCTAGAGCAGTTTACTGGCC
>XM_039777256.1
CTCCTCAGCCTTTATAACAGCTGCCTGCAGCTCAGAAACACAGGTTGTATTCAACGAAACATGAAGACTTTCAATCTGTGCATTCTAGTGAGCCTGGCTGTCGCAGTTTACTGCGTGCCAATATCGCATGTTACTGGGCAAGATGAGGATTTTGCAGAGAGCTACCTGAAGAAATTCTTCAACCTAAAAGAGGAGAAAGGTCCCACTAGCAGACGTGGGGTCAGCGCGGTGAGCAGGAAGCTGAGTGAGATGCAGAGATTCTTTGGCCTCCATATCACCGGGACTCTGGATGCTGACACCATGACGATGATGAAGAAGCCCCGCTGTGGCGTCCCAGACACCAACATTGCCAGTTTCTCCACGTTTGAAAGAAACCTGAAGTGGGAGAAAAACAGCCTTACCTACAGGATAGAGAACTACACATCTGACATGTCTGTGCAAGAGGTAGATGACTCCATAGAAAAAGCGCTGCAGGTTTGGGCCAAAGTCACTCCTCTGAGATTCACAAGAATCCAAAGTGGCACCGCTGACATCATGATCTCCTTTGGCCGCCAAGAACATGGTGATTTTTACCCTTTTGATGGCCCTGATGGCACTCTTACCCATGCCTTCCCCCCGGGCACTGGCATTGGAGGAGATGCTcattttgatgatgatgagtcCTTTACTTTCCGCTCAAATACCGGCTACGTCCTCTTCCTGGTGGCTGCCCATGAGTTTGGCCACTCCCTGGGCTTGTCTCACTCTGATGATCCTGGTGCTCTCATGTACCCTGTGTACTCATACAATAACCCAGACACCTTTGTTCTGCCACGGGATGATATCAACGGCATCCAGTCTCTCTATGGTCCAAAACCTGATACGGATGGAGATATAGATAAACCTcagccccccaccacccccgaTGCCTGTGATTCAACCCTGGTCCTGGATGCTGTCGCCACCCTGCGAGGAGAGATGCTCTTCTTCAAGGACAACTTCTTCTGGCGGAGCTACCCTCAGAGCAATACACCTCAGCAAACTCTCATCACAAACTTCTGGCCCAAAGCCCCCACCCACATCGACGCTGCTTATGAAAGCCAACAGTCAGACAGACTCCTTCTCTTTAAAGATCGGAGAGTGTGGGCTTTCAGTGGCTATGATCTTGTGAGAGGCTATCCTAAACCAATTTCCAGTTTTGGTCTGCCCAAAAGTGTCAAGAAAATCAATGCGGCCCTCTATGACGTGGAATCTGCCAAGACTCTGTTCTTTGTAGGCACCTCTTACTACAGTTATGATGAGGCCAAGAAGACCATGGACCAGGGATTCCCCAAGCCAGTGGATCAGACGTTCTCCGGCCTGACCAGCAAAGTGACTGCAGCTCTCCAGGTCAAAGGTTTTACTTACATCTACAGTGGACCGTACATGTTTGAGTACAGCCTGAGCACCGGGAGGTTGTTCCGTGTGCTGAGGAGCAGCTAATTCCTGCGCTGCTCTAACTTCTAGAGCAGTTTACTGGCCAAGCTGTTTATGTAGCCACTCTGAATGAGAATGAAGGAAACAGTTAAAGTGTCCATGTCTATGCAATAATATATCTTAAAATATAGAATTGTATTTTTACACACGTATGGTTTCATACTGGATATATGCCCTTCCTGAGAACAGCaccttttatgttttttaaaatggTATTTTTGTGAGGTATTTTTGTTCCGGCGCAAGCATTAcgtggtcctattttgcagtttcagaaaacaattccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230595 False 425 TUCP 0.52 4 30738055 30739267
TU230603 False 529 TUCP 0.50 3 30829067 30829943
XM_039777252.1 False 1500 mRNA 0.50 10 30763992 30830309
XM_039777253.1 False 1500 mRNA 0.50 10 30737565 30830309
XM_039777254.1 False 1520 mRNA 0.50 11 30752071 30830309
XM_039777255.1 False 1440 mRNA 0.52 10 30737565 30740608
XM_039777256.1 True 1742 mRNA 0.48 10 30826922 30830309

Neighbor

gene id symbol gene type direction distance location
LOC120575605 LOC104951202 coding downstream 28224 30702500 ~ 30709341 (-)
mmp30 NA coding downstream 35935 30697366 ~ 30701630 (-)
acat1 acat1 coding downstream 40824 30688426 ~ 30696741 (-)
tmprss2 LOC104945283 coding downstream 53877 30677099 ~ 30683688 (-)
dscama NA coding downstream 113171 30510724 ~ 30624394 (-)
LOC120543889 NA coding upstream 23247 30853556 ~ 30857220 (-)
LOC120543607 NA coding upstream 29292 30859601 ~ 30875760 (-)
acer3 acer3 coding upstream 60183 30890492 ~ 30901561 (-)
serpinh1a LOC103370387,LOC104930320 coding upstream 73322 30903631 ~ 30910364 (-)
samsn1b NA coding upstream 136322 30966631 ~ 30988577 (-)
G170054 NA non-coding downstream 5677 30729002 ~ 30731888 (-)
G169956 NA non-coding downstream 285059 30450547 ~ 30452506 (-)
G169941 NA non-coding downstream 308509 30428848 ~ 30429056 (-)
G169928 NA non-coding downstream 349510 30387854 ~ 30388055 (-)
G169927 NA non-coding downstream 371928 30351873 ~ 30365637 (-)
G170078 NA non-coding upstream 57697 30888006 ~ 30889575 (-)
G170085 NA non-coding upstream 83393 30913702 ~ 30914239 (-)
G170092 NA non-coding upstream 106597 30936906 ~ 30937273 (-)
G170106 NA non-coding upstream 191595 31021904 ~ 31022240 (-)
G170129 NA non-coding upstream 277733 31108042 ~ 31110208 (-)
LOC120575604 NA other downstream 5483 30718215 ~ 30732082 (-)
si:ch73-1a9.3 NA other downstream 322830 30411229 ~ 30414735 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other downstream 396319 30306849 ~ 30341246 (-)
ei24 ei24 other downstream 443035 30283080 ~ 30294530 (-)
map6a map6,LOC102787944,LOC103142112 other downstream 766485 29945668 ~ 29971080 (-)
LOC120543892 LOC103394800 other upstream 16689 30846998 ~ 30851054 (-)
G170098 NA other upstream 127192 30957501 ~ 30958498 (-)
G170463 NA other upstream 1371400 32201709 ~ 32202206 (-)
LOC120543978 fez1 other upstream 1612977 32443286 ~ 32491305 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 2738312 33568621 ~ 34100246 (-)

Expression


Co-expression Network