LOC120575604


Basic Information

Item Value
gene id LOC120575604
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30718215 ~ 30732082 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU230604
CTGTCAGTTGCCACATTGGACCGTGTCTGTGATCTTTTAGCCTATATAACAGCTGACTTCCAGCACAGAAACACAAGTGGCATTCAAGGAGGAAGCATGAGGTCTTGCAGTCTGTGCATCATCCTGAGCCTGGCGGTGGCAGTTTACTGCGTGCCTGTATCACAAGTCACTGAGCAAGATGAACATGATGCAGAGAGCTACCTGAAAAGATCTTTCAACCTAACAGAGGAGAAAGGTCCAACTGGCAGACG
>XM_039826405.1
ATTCAAGGAGGAAGCATGAGGTCTTGCAGTCTGTGCATCATCCTGAGCCTGGCGGTGGCAGTTTACTGCGTGCCTGTATCACAAGTCACTGAGCAAGATGAACATGATGCAGAGAGCTACCTGAAAAGATCTTTCAACCTAACAGAGGAGAAAGGTCCAACTGGCAGACGGGGGGTCCGCGCGGTGAGCAGGAAGCTGAGTGAGATGCAGAGATTCTTTGGCCTCCAGATCGCTGGGACTCTGGATGCTGACACCATTGCGACGATGAAGAAGCCCCGCTGTGGCGTCCCAGACACCAACATTGCCAGTTTCTCCACGTCTGGAAGTAACCTCAAGTGGGAGAAAAACAGCCTTACCTACAGGATAGAGAACTACACACCTGACATGTCTGTGTCAGAGGTAGATAACTCCATAGAGAAAGCGCTGCAGGTTTGGGCCAAAGTCACTCCTCTGAGATTCACAAGAATCCAAAGTGGCACCGCTGACATCATGATCTCCTTTGGCCGCCAAGAACATGGTGATTATTACCCCTTTGATGGCCCTGGTGGATTTCTTGCCCATGCCTTCCCCCCAGGCCCTGGCACTGGAGGAGATGCTcattttgatgatgatgagaacTTCACTTTCCGCTCAAATACCGGCTACGTCCTCTTCCTCGTGGCTGCCCATGAGTTTGGCCACTCCCTGGGCTTGTCTCACTCTGATGATCCTGGTGCTCTCATGTACCCTGTGTACTCATACAATAACCCAGACACCTTTGTTCTGCCACGGGATGATGTCAACGGCATCCAGTCTCTCTATGGTCCAAACCCTGATACGGATGGAGATATAGATAAACCTgagccccccaccacccccgaTGCCTGTGATTCAACCCTGGTCCTGGATGCTGTCGCCACCCTGCGAGGAGAGATGCTCTTCTTCAAGGACAACTTCTTCTGGCGGAGCTACCCTCAGAGCAATACACCTCAGCAAACTCTCATCACAAACTTCTGGCCCGAAGCCCCCACCCACATCGACGCTGCTTATGAAAGCCAACAGTCAGACAGACTCCTTCTCTTTAAAGGTCGGAGAGTGTGGGCTTTCAGTGGCTATGATCTTGTGAGAGGCTATCCTAAACCAATTTCCAGTTTTGGTCTGCCCAAAAGTGTGAAGAAAATTGATGCGGCCCTCTATGACGTGGAATCTGCCAAGACTCTGTTCTTTGTAGGCAGATTTTACTACAGTTATGATGAGGCCAAGAAGACCATGGACCAGGGATTCCCCAAGCCATTGGATCAGACATTCTCCGGCCTGAGCGGCAAGGTGACTGCAGCTCTCCAGGTCAAAGGTTTTACTTACATCTACAGCGGACCGTACATGTTTGAGTACAGCCTGAGCACCGGGAGGTTGTTCCGTTTGCTGAGGAACAGCTACTTCCTGCACTGCTCTAACTTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU230604 False 251 lncRNA 0.49 3 30720942 30732082
XM_039826405.1 True 1440 mRNA 0.51 10 30718215 30721256

Neighbor

gene id symbol gene type direction distance location
LOC120575605 LOC104951202 coding downstream 8874 30702500 ~ 30709341 (-)
mmp30 NA coding downstream 16585 30697366 ~ 30701630 (-)
acat1 acat1 coding downstream 21474 30688426 ~ 30696741 (-)
tmprss2 LOC104945283 coding downstream 34527 30677099 ~ 30683688 (-)
dscama NA coding downstream 93821 30510724 ~ 30624394 (-)
LOC120543889 NA coding upstream 121474 30853556 ~ 30857220 (-)
LOC120543607 NA coding upstream 127519 30859601 ~ 30875760 (-)
acer3 acer3 coding upstream 158410 30890492 ~ 30901561 (-)
serpinh1a LOC103370387,LOC104930320 coding upstream 171549 30903631 ~ 30910364 (-)
samsn1b NA coding upstream 234549 30966631 ~ 30988577 (-)
G169956 NA non-coding downstream 265709 30450547 ~ 30452506 (-)
G169941 NA non-coding downstream 289159 30428848 ~ 30429056 (-)
G169928 NA non-coding downstream 330160 30387854 ~ 30388055 (-)
G169927 NA non-coding downstream 352578 30351873 ~ 30365637 (-)
G169912 LOC103363040,LOC108244715 non-coding downstream 451781 30264550 ~ 30266434 (-)
LOC120543896 NA non-coding upstream 56387 30788469 ~ 30791876 (-)
G170078 NA non-coding upstream 155924 30888006 ~ 30889575 (-)
G170085 NA non-coding upstream 181620 30913702 ~ 30914239 (-)
G170092 NA non-coding upstream 204824 30936906 ~ 30937273 (-)
G170106 NA non-coding upstream 289822 31021904 ~ 31022240 (-)
si:ch73-1a9.3 NA other downstream 303480 30411229 ~ 30414735 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other downstream 376969 30306849 ~ 30341246 (-)
ei24 ei24 other downstream 423685 30283080 ~ 30294530 (-)
map6a map6,LOC102787944,LOC103142112 other downstream 747135 29945668 ~ 29971080 (-)
LOC120543707 c2cd2 other downstream 816278 29882806 ~ 29901937 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other upstream 5483 30737565 ~ 30830309 (-)
LOC120543892 LOC103394800 other upstream 114916 30846998 ~ 30851054 (-)
G170098 NA other upstream 225419 30957501 ~ 30958498 (-)
G170463 NA other upstream 1469627 32201709 ~ 32202206 (-)
LOC120543978 fez1 other upstream 1711204 32443286 ~ 32491305 (-)

Expression


Co-expression Network