G170939


Basic Information

Item Value
gene id G170939
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 35166008 ~ 35166650 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU231742
atttgtctcatgtactgaTTGCTCGGCCGGCCGGTGGGCGGCATCAATCTGAAACGGAACGAAGCCCACTCACGGccgacagcagaaacaggagccgaacATGTCcgcccacccaccccggaagaactacaagtgctcaagctttgtaacagattctgggccgcgtctatagtgggagttgtagtttttaaatatattggtatatttctcatatgtagaagttggtagtgtagaattttggatacaccctggggttttttgggatggggaacacactggtgtcatcagattttaaaaatcgaatcgttaaacaggtgaaaatagcttattaccatatttgacagtgcttacagtgggtaaactttggtgaccatatctacatgatagctgaggtccagagcttttttatgtgtgttgcaccttctgttgctaaatgacatcaGCTGAAGACTGCTGAAGTGACAATTACCACTCGGCGGATAGAAAAGATTGCTGCAcgtaaaagaataaaacaaattgctgcacgttgtacgtgagaatttatacaataaaaataccaataatgaaagaatagtgttttatgctaagcactttgatttgccttgtcgcagaaaaatactaggcctatataaacaaactacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU231742 True 643 lncRNA 0.42 1 35166008 35166650

Neighbor

gene id symbol gene type direction distance location
LOC120544521 NA coding downstream 10478 35141586 ~ 35155530 (-)
LOC120543600 NA coding downstream 69427 35093533 ~ 35096581 (-)
picalma picalm,LOC103372414 coding downstream 403693 34700631 ~ 34762315 (-)
sytl2a NA coding downstream 473757 34671780 ~ 34692251 (-)
dlg2 dlg2,LOC103395064,LOC106603804 coding downstream 496193 34424177 ~ 34669815 (-)
LOC120543900 LOC103356033,LOC103395035,LOC102795216 coding upstream 7953 35174603 ~ 35206508 (-)
LOC120543901 LOC102293384,LOC102794930,LOC103356032,LOC102210724 coding upstream 53356 35220006 ~ 35235441 (-)
LOC120575652 NA coding upstream 172195 35338845 ~ 35340336 (-)
LOC120543619 NA coding upstream 635420 35802070 ~ 35811198 (-)
LOC120543620 NA coding upstream 708073 35874723 ~ 35879361 (-)
G170942 NA non-coding downstream 14074 35151281 ~ 35151934 (-)
G170938 NA non-coding downstream 25586 35138978 ~ 35140422 (-)
G170928 NA non-coding downstream 28791 35136967 ~ 35137217 (-)
G170927 NA non-coding downstream 29410 35135005 ~ 35136598 (-)
G170926 NA non-coding downstream 32802 35131641 ~ 35133206 (-)
G170976 NA non-coding upstream 5225 35171875 ~ 35173129 (-)
G170985 NA non-coding upstream 104684 35271334 ~ 35272234 (-)
G170988 NA non-coding upstream 116602 35283252 ~ 35283899 (-)
G171003 NA non-coding upstream 163847 35330497 ~ 35330789 (-)
G171012 NA non-coding upstream 175757 35342407 ~ 35342893 (-)
cblb cblb other downstream 149889 34923373 ~ 35016119 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other downstream 856294 34308994 ~ 34309714 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other downstream 1065762 33568621 ~ 34100246 (-)
LOC120543978 fez1 other downstream 2674703 32443286 ~ 32491305 (-)
G170463 NA other downstream 2963802 32201709 ~ 32202206 (-)
LOC120575651 LOC105011014,LOC103356025,LOC103395028,LOC106603763 other upstream 940164 36106814 ~ 36246233 (-)
LOC120575647 kirrel3,LOC106567547,LOC105011011 other upstream 1250273 36416923 ~ 36780232 (-)
LOC120544784 NA other upstream 1515450 36682100 ~ 36682165 (-)
LOC120544707 prrg3 other upstream 1829874 36996524 ~ 37062264 (-)
LOC120544517 dmpk,LOC104958301 other upstream 2218058 37384708 ~ 37553770 (-)

Expression


Co-expression Network