hsf5


Basic Information

Item Value
gene id hsf5
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28028351 ~ 28033616 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039776776.1
AAATAAGCTGTCCTGTCTAGCTGTAGAATATTATAGAATCCTGGCAGTTGGCCCCAGAATCAGTCAGTGTCAGATGAAACGTCTAAACTCCAACAGTTCCAACGGTTCGGGAACACTTCCAACGGCCCGGAGAACAGAAGAGAGTCATCTTTGGAGCTCCAGACTTAGCTAAGCATGGATGTCGGTGAAAATTCCCTCCCAGACAGCATCAACCCTAATAACTTTCCTGCCAAACTATGGCGTTTAGTGAACAACCCGCTAAATGACGCCATCTACTGGGACAAACTCGGCCAGGTGGTCGTCATTGATCAGCATCTCTTCGAGAGACAGATCTTGTCTCCTAGCAACATCACCACCCCGGACAACGCTGACTCCTTCAAAACGACCAACTTCTCAAGCTTTGTCCGTCAGCTGAATCTGTATGGCTTCAGGAAAGCCGATCCGGCTGTTAAAGACACCTGGGACAATGCAGCATATCATCATTTTTACAACCCAAACTTCCAGCGAGACCAACCTGAACTTGTTGCGAGTCTGAGGAGACTCACTGTCGACAACAAGGCAAAGATACAAGCTGGTGTGAACGTGAAAAGTCGGCCCCCGAGTCGGTACCTGCGATACAGTGGGGGTGATGATGGCACagataaaaatgtgaaaagagTCAGTACTTCACTGCTTAGCCCCACACATCAGGAGTCAACTCATCCTTACTATCCCAATAAAGCTCAGCCCATGACAGCACACAATGGAACCCCAGTCCCACCACGATTCCTGATAAGAGGCCATGGTGCAGCTCTTTCGCCGACTGTCTTTGCTGCAGACAAAGGGTTACAAGTGTCTTTAAGCCACCACTATGCTGGGGTAGCCTCAAGCGCCAATGCCATGCACATTCAGCAGAGTTTACTGTCCCGTGCAAACCATGGAAACCCAAATTTCCCTTTTACTTCTCCAAATGCACAATATCCGCCTGGCTACTATTCCCCAGTTTGCCAGTGCTACCATCAGAACCTTGTGGCATCACATATGGCAGGTAGTGGGATTCAGACAGGCTCGTTTTCTCCCCACAGTTATTACCAGGCGAGCTATCCTGTGAATATGTTGTGCCATGGGGACAACAACCAGGATATAAAGAACATGGAACACCAGGAGGTGAAAAAATTTGACATTAACTTGGACACAATTTTCCAGATTGCCGATGAGGTGATGCAAACTCCGCCCAATAACAACCTGGTTAGAGTCGTGACCCCAGAGAAGCCAGGCCCTGTGTTAGTGCCGTTCACCTGTAACCCCGTGATGTATGACAAACCTGCCAGCACCATGAAAGCTAACCCTTTGTATGGATCCATTATAATGGCTGTGTCAGGCCATGCTGATCTAGTCAAATGCGAACAGCAGGAAGAATCTGTGGTTTCAGTACCTGACAAAATGCCTGAAGATGCCATATCCGAGGTTACCGTTGATGATGCAAAGGACACGGAGGTTATAGGTGGCGAGGTTAGCGACAGTCTGAGGGATACCAGTCAGGCCGATAACAGCAAATGGACAGGAAGTACACCAAATATTTAGATCTCAACTTGTTGATTTGATTGGCATGTGACAGGGAGTCTTGATTCACTTCAGGATTTGATCTCAGATTCTCACTATTATCAGACTTTATTCTCCATTTTAGTGAGTTTTGTGTAAAAGATGCGTtctattttaaattttatttcatTCTTGTAGCAAAAGTAGTTGTAGGCTGTACATTtgtgtacagtatttgtttAATAGCAGTGATTTTCCTTATTGTTAGTGACTTTGGAAAATACAATAATTTGattaacaaaacattaaaaaaaggttttacctCTATATTTTTACCACagtattttctaaaatgtaagtatCTTGTAATGTTTTTAAAGAATTGTAATTTTAAGTATAATTTATACAGATTTGCTACAGTAAAGGCTACCTCTGGCTGTCCCCATGTAATGTGCATGCTTGACTTAGTTTTTAATAGCATAACTGGTAGTGTTTGTCATAGCAAGTTGTAACAAACTGCTGTAATGGGGGAGAAAATATTGAATAAGTGTATGAAAATATAATCCTATTGATTGTTGATATTGATTGCTTTATGATGGTGACCAAGTGGTGGTTGCATTTCcccacctttttatttttccactgCATCACTTAAAAGGTGCAGGGTTTTTTGAACGTGTcactgaagtgttttttttttaattgcaagtGTGTAAAAGTATTATAATTAAAGTTGAATATATGTCCAATAA

Function

NR:

description
heat shock factor protein 5-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039776776.1 True 2273 mRNA 0.43 7 28028351 28033616

Neighbor

gene id symbol gene type direction distance location
mtmr4 NA coding downstream 108086 27875127 ~ 27920265 (-)
ca4a ca4,LOC104949315,LOC103363689 coding downstream 155113 27800213 ~ 27873238 (-)
LOC120544612 NA coding downstream 196146 27816207 ~ 27832205 (-)
znhit3 NA coding downstream 329602 27693482 ~ 27698749 (-)
ggnbp2 ggnbp2,LOC102784373 coding downstream 361615 27659196 ~ 27666736 (-)
hspb1 hspb1 coding upstream 174047 28207663 ~ 28212119 (-)
LOC120544092 c1qbp coding upstream 315000 28348616 ~ 28356555 (-)
dhx33 dhx33,LOC103370271 coding upstream 325161 28358777 ~ 28367461 (-)
camkk1a camkk1 coding upstream 365751 28399367 ~ 28470511 (-)
atp2a3 atp2a3 coding upstream 442297 28475913 ~ 28539128 (-)
G169289 NA non-coding downstream 233563 27790056 ~ 27794788 (-)
G169275 NA non-coding downstream 278793 27749305 ~ 27749558 (-)
G169255 NA non-coding downstream 311419 27713939 ~ 27716932 (-)
G169241 NA non-coding downstream 392332 27635596 ~ 27636019 (-)
G169236 NA non-coding downstream 424437 27602391 ~ 27603914 (-)
G169387 ssc4d non-coding upstream 129519 28163135 ~ 28203753 (-)
G169399 NA non-coding upstream 200974 28234590 ~ 28234949 (-)
G169402 NA non-coding upstream 297036 28330652 ~ 28330971 (-)
G169417 NA non-coding upstream 323395 28357011 ~ 28357377 (-)
G169447 NA non-coding upstream 363364 28396980 ~ 28399180 (-)
LOC120544024 rnf43 other downstream 574 27930539 ~ 28027777 (-)
gusb gusb other downstream 281893 27718999 ~ 27746458 (-)
pigw pigw,LOC107090330,LOC102785725,LOC102220786 other downstream 326800 27668681 ~ 27701551 (-)
emc6 emc6 other downstream 509350 27515890 ~ 27519001 (-)
flrt1a flrt1,LOC104926332,LOC103360355 other downstream 1087144 26870550 ~ 26941207 (-)
LOC120544668 tspoap1 other upstream 13991 28047607 ~ 28122618 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other upstream 183627 28217243 ~ 28313133 (-)
LOC120575713 mlxipl other upstream 280553 28314169 ~ 28347490 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other upstream 621261 28654877 ~ 28664051 (-)
atp5l atp5l,LOC102215954 other upstream 770762 28804378 ~ 28808441 (-)

Expression


Co-expression Network