dhx33 (dhx33,LOC103370271)


Basic Information

Item Value
gene id dhx33
gene name dhx33,LOC103370271
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28358777 ~ 28367461 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777646.1
CGTTTTTTGCAGAGCTAGCAAAACATCCGCAGTGACGCTTGCTCGTCCGTCCGCGAGcatgaaaaatactttttttgtttctttttgacattaaaaaaaaaatctcaagaGAAAGAGCTACAAAGGTTTCGCTGTCAGAGTGACTTTTTCTAGACCATGCCCAACGACCCCGACCCTCCTCCGGCTAAAAGATTCAAGCCGGGGTCTGTTTTCTTCCGTCAACATAAGAATAAACCTGGAATGCTGCTGCCTAGAAAGGGACATGTAACCACTCCGATAGACGTCCAGAGGAAACAGCTTCCAATCTACCAGGCCAAACCTCAGCTACTTAACCAACTGAGACAGCTCCACAATGCTATCCTGATAGGGGAGACTGGCTCTGGGAAGACCACTCAGATCCCCCAGTATCTGTATGAGGCCGGCATAGGACGAGCAGGCATCATCGCCATCACTCAGCCCCGGCGAGTTGCTGCTGTCTCGCTGGCAGGAAGAGTGGCAGAGGAGAAGAGGACTCCGCTTGGCAAGCTGGTGGGTTACACAGTGCGCTTTGAGGATGTCACCTCCTCTGAGACGAAGCTGAAGTTCATGACCGATGGCATGCTTCTGCGTGAGGCCATCGGAGACCCCTTGCTGCTGCGCTACACTGTGGTGGTCCTGGACGAAGCTCACGAGCGCACCGTGCACACTGATGTGCTGTTTGGCGTGGTTAAGACTGCTCAACGCAGGCGCAGAGAACTTAATAAGATTCCCCTGAAGGTCATAGTGATGTCAGCCACGATGGATGTGGATTTGTTCTCGGAGTACTTTAACAAGTCACCTGTACTGTACCTGGAGGGCAGGCAGCATCCCATTCAGATCTACTACACCAAGCAGCCCCAGTCAGACTACCTGCAGGCTGCGCTTGTCTCCATCTTCCAGATCCATCAGGAGGCCCCTCCGTCCCATGATATCTTAGTCTTCATGACGGGTCAGGAGGAGATCGAGGCTCTGGCGAGGACATGCCGGGACATCGCCAAGCATCTGCCCGACGGCTGTGGTCCCATGGTAGTTATCCCCTTGTACGCGTCGCTGCCCCCAACACAGCAGCTCAGGGTCTTCCAGCCAGCGCCCAAGGGAAGTAGGAAGGTCATCCTCTCAACCAACATTGCCGAGACGTCGGTTACAATCTCTGGGATCAAATTCGTCATAGACACGGGGATGGTTAAGGCCAAACGTTTCAATCCTGACAGCGGGCTGGAGGTGCTGGCAGTGCAGCGGGTTTCTAAAGCCCAGGCGTGGCAGCGAGCGGGTCGGGCTGGCAGGGAGGACTCAGGCTCCTGCTATCGCCTCTACACAGAGCCGGAGTTCGACAACCTCATCCCTATGACTGTGCCTGAGATCCAGAGGTGTAACCTAGCCAGTGTAATGCTGCAGCTCATGGCCCTGGGGATTCCAGATGTGATGAATTTTGATTTCATGTCCAAGCCTTCTCCAGAGGCCGTTCGCTCGGCTCTGGAGCATTTGGAGCTGCTGGGCGCTgtagagaggaaggaggggcaGGTTTTCCTCACTGCTCTGGGAAAGAAGATGGCCAGCTTCCCTCTGGAGCCTAGATATGccaagACCATCCTGCTGTCCCCCGACTACTCCTGTTCTGAGGAGATTTTGAGCATTGTGTCTCTGCTGTCAGTGGACACCGTGCTGTTTAACCCCCCTGCCCGGCGGGACGAGGTGCTCGCTGCACGCAAGAAGTTCTCCTCCAGCGAAGGAGACCACATGACGCTGCTTAACATTTACAGAGCGTTCAAGAAAGTCAGCGGTAATAAGGAGTGGTGTCGGGAGAACTTTGTCAACAGCAGGAACATGGGTCTGGTGAAAGAGGTCCAGGCGCAACTCAAAGATATCTGCCTTAAGCTGAATTTGAAGCTGGAGTCGTGCGGGGCGGACACAGGGAACGTTCGCCGCTGCCTCGCCCACGGGATGTTCGTCAACGCTGCGGAGCTGCAGCCCGACGGCAGCTACTTAGCTCTGGACACCCACCAGCCCGTGGCCATCCACCCCTCCTCCGTCCTGTTCCAGGGAAAGCCAGCATATGTGGTGTTCAACGAGCTGCTGCACACCTCCCGCTGCTACATGAGAGACCTGTGTTTGGTGGATGCCGACTGGCTGCTGGATGCAGCGCCAGAGTACTTTGGCCGCAAACTCCACCCGACCAAGAGCTAACCAACAGGGAAACAGGACTGGAGTAAACCTTCCTCGAATCACCCAGTGGCAATAACGCTGGAAGATGTGTTATCTTCACAAAGATGAAATTTGGGATAAAGACACTTATTGATTTTCATTTGCAAATCAGAACGGAACCTTTTCTGTGTAGTAAACTTGTCTGGATTTCACTACCTCCCAGTTGGCAAGCATTTAGCATGTGTCACTGCAGCACAAATCTGCATATCGAGGCCTCACAACTTTGACTTCCTGTAAGACTGTAATTCAGATTTTATAAATTGTGTTTCTTCTGCCTGGTAGTATTTCATCTTGCCATTTGGCCACCTGGAAGaaagagtatttttttttttttaagtgttgtgCATCAATTCTTTCAACGTTTGCATGCATCTTAACAACACCGATAACCTCACAGGAGCAGTTCTTCAATAAGCATCGTCTGATATGATTTATATGTTTGTTAtttctgaaaacaaaaaacaaaacagacttgCTGAAATGCTACTCTCCATATGTTAATCTCACAAGATAGTGTACTTAATTGTTAAGCCACCTATCCAACACGATTCAGAAATCTATAGTAGACTGGAATGGTTCTTTTCAGTGTATTTTTGAATAATAACGACGATTTAACAGTCTTTGAAATGTTAGCTTCTCAGAAGCTAAGTAAAGCAGTCTTGTCTTAAGCTTT
>XM_039777647.1
CAGCTTCCAATCTACCAGGCCAAACCTCAGCTACTTAACCAACTGAGACAGCTCCACAATGCTATCCTGATAGGTAACGTTAAGGGGAGACTGGCTCTGGGAAGACCACTCAGATCCCCCAGTATCTGTATGAGGCCGGCATAGGACGAGCAGGCATCATCGCCATCACTCAGCCCCGGCGAGTTGCTGCTGTCTCGCTGGCAGGAAGAGTGGCAGAGGAGAAGAGGACTCCGCTTGGCAAGCTGGTGGGTTACACAGTGCGCTTTGAGGATGTCACCTCCTCTGAGACGAAGCTGAAGTTCATGACCGATGGCATGCTTCTGCGTGAGGCCATCGGAGACCCCTTGCTGCTGCGCTACACTGTGGTGGTCCTGGACGAAGCTCACGAGCGCACCGTGCACACTGATGTGCTGTTTGGCGTGGTTAAGACTGCTCAACGCAGGCGCAGAGAACTTAATAAGATTCCCCTGAAGGTCATAGTGATGTCAGCCACGATGGATGTGGATTTGTTCTCGGAGTACTTTAACAAGTCACCTGTACTGTACCTGGAGGGCAGGCAGCATCCCATTCAGATCTACTACACCAAGCAGCCCCAGTCAGACTACCTGCAGGCTGCGCTTGTCTCCATCTTCCAGATCCATCAGGAGGCCCCTCCGTCCCATGATATCTTAGTCTTCATGACGGGTCAGGAGGAGATCGAGGCTCTGGCGAGGACATGCCGGGACATCGCCAAGCATCTGCCCGACGGCTGTGGTCCCATGGTAGTTATCCCCTTGTACGCGTCGCTGCCCCCAACACAGCAGCTCAGGGTCTTCCAGCCAGCGCCCAAGGGAAGTAGGAAGGTCATCCTCTCAACCAACATTGCCGAGACGTCGGTTACAATCTCTGGGATCAAATTCGTCATAGACACGGGGATGGTTAAGGCCAAACGTTTCAATCCTGACAGCGGGCTGGAGGTGCTGGCAGTGCAGCGGGTTTCTAAAGCCCAGGCGTGGCAGCGAGCGGGTCGGGCTGGCAGGGAGGACTCAGGCTCCTGCTATCGCCTCTACACAGAGCCGGAGTTCGACAACCTCATCCCTATGACTGTGCCTGAGATCCAGAGGTGTAACCTAGCCAGTGTAATGCTGCAGCTCATGGCCCTGGGGATTCCAGATGTGATGAATTTTGATTTCATGTCCAAGCCTTCTCCAGAGGCCGTTCGCTCGGCTCTGGAGCATTTGGAGCTGCTGGGCGCTgtagagaggaaggaggggcaGGTTTTCCTCACTGCTCTGGGAAAGAAGATGGCCAGCTTCCCTCTGGAGCCTAGATATGccaagACCATCCTGCTGTCCCCCGACTACTCCTGTTCTGAGGAGATTTTGAGCATTGTGTCTCTGCTGTCAGTGGACACCGTGCTGTTTAACCCCCCTGCCCGGCGGGACGAGGTGCTCGCTGCACGCAAGAAGTTCTCCTCCAGCGAAGGAGACCACATGACGCTGCTTAACATTTACAGAGCGTTCAAGAAAGTCAGCGGTAATAAGGAGTGGTGTCGGGAGAACTTTGTCAACAGCAGGAACATGGGTCTGGTGAAAGAGGTCCAGGCGCAACTCAAAGATATCTGCCTTAAGCTGAATTTGAAGCTGGAGTCGTGCGGGGCGGACACAGGGAACGTTCGCCGCTGCCTCGCCCACGGGATGTTCGTCAACGCTGCGGAGCTGCAGCCCGACGGCAGCTACTTAGCTCTGGACACCCACCAGCCCGTGGCCATCCACCCCTCCTCCGTCCTGTTCCAGGGAAAGCCAGCATATGTGGTGTTCAACGAGCTGCTGCACACCTCCCGCTGCTACATGAGAGACCTGTGTTTGGTGGATGCCGACTGGCTGCTGGATGCAGCGCCAGAGTACTTTGGCCGCAAACTCCACCCGACCAAGAGCTAACCAACAGGGAAACAGGACTGGAGTAAACCTTCCTCGAATCACCCAGTGGCAATAACGCTGGAAGATGTGTTATCTTCACAAAGATGAAATTTGGGATAAAGACACTTATTGATTTTCATTTGCAAATCAGAACGGAACCTTTTCTGTGTAGTAAACTTGTCTGGATTTCACTACCTCCCAGTTGGCAAGCATTTAGCATGTGTCACTGCAGCACAAATCTGCATATCGAGGCCTCACAACTTTGACTTCCTGTAAGACTGTAATTCAGATTTTATAAATTGTGTTTCTTCTGCCTGGTAGTATTTCATCTTGCCATTTGGCCACCTGGAAGaaagagtatttttttttttttaagtgttgtgCATCAATTCTTTCAACGTTTGCATGCATCTTAACAACACCGATAACCTCACAGGAGCAGTTCTTCAATAAGCATCGTCTGATATGATTTATATGTTTGTTAtttctgaaaacaaaaaacaaaacagacttgCTGAAATGCTACTCTCCATATGTTAATCTCACAAGATAGTGTACTTAATTGTTAAGCCACCTATCCAACACGATTCAGAAATCTATAGTAGACTGGAATGGTTCTTTTCAGTGTATTTTTGAATAATAACGACGATTTAACAGTCTTTGAAATGTTAGCTTCTCAGAAGCTAAGTAAAGCAGTCTTGTCTTAAGCTTT

Function

symbol description
dhx33 Predicted to enable RNA binding activity. Acts upstream of or within regulation of transcription by RNA polymerase I. Predicted to be active in nucleolus. Is expressed in central nervous system and digestive system. Orthologous to human DHX33 (DEAH-box helicase 33).

NR:

description
PREDICTED: putative ATP-dependent RNA helicase DHX33

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K17820 DHX33; ATP-dependent RNA helicase DHX33

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777646.1 True 2893 mRNA 0.51 12 28358777 28367461
XM_039777647.1 False 2610 mRNA 0.51 12 28358777 28367167

Neighbor

gene id symbol gene type direction distance location
LOC120544092 c1qbp coding downstream 2222 28348616 ~ 28356555 (-)
hspb1 hspb1 coding downstream 146658 28207663 ~ 28212119 (-)
hsf5 NA coding downstream 325161 28028351 ~ 28033616 (-)
mtmr4 NA coding downstream 438512 27875127 ~ 27920265 (-)
ca4a ca4,LOC104949315,LOC103363689 coding downstream 485539 27800213 ~ 27873238 (-)
camkk1a camkk1 coding upstream 31906 28399367 ~ 28470511 (-)
atp2a3 atp2a3 coding upstream 108452 28475913 ~ 28539128 (-)
zzef1 zzef1 coding upstream 226963 28594424 ~ 28632819 (-)
ankfy1 ankfy1 coding upstream 268252 28635713 ~ 28653484 (-)
ruvbl2 ruvbl2 coding upstream 407352 28774813 ~ 28782861 (-)
G169417 NA non-coding downstream 1400 28357011 ~ 28357377 (-)
G169402 NA non-coding downstream 27806 28330652 ~ 28330971 (-)
G169399 NA non-coding downstream 123828 28234590 ~ 28234949 (-)
G169387 ssc4d non-coding downstream 155024 28163135 ~ 28203753 (-)
G169289 NA non-coding downstream 563989 27790056 ~ 27794788 (-)
G169447 NA non-coding upstream 29519 28396980 ~ 28399180 (-)
G169524 NA non-coding upstream 332360 28699821 ~ 28704621 (-)
G169550 NA non-coding upstream 385814 28753275 ~ 28755551 (-)
G169551 NA non-coding upstream 390082 28757543 ~ 28761645 (-)
G169612 cltc non-coding upstream 476963 28844424 ~ 28849113 (-)
LOC120575713 mlxipl other downstream 11287 28314169 ~ 28347490 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other downstream 45644 28217243 ~ 28313133 (-)
LOC120544668 tspoap1 other downstream 236159 28047607 ~ 28122618 (-)
LOC120544024 rnf43 other downstream 331000 27930539 ~ 28027777 (-)
gusb gusb other downstream 612319 27718999 ~ 27746458 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other upstream 287416 28654877 ~ 28664051 (-)
atp5l atp5l,LOC102215954 other upstream 436917 28804378 ~ 28808441 (-)
LOC120544028 LOC107730113 other upstream 1394988 29762449 ~ 29796427 (-)
LOC120543707 c2cd2 other upstream 1515345 29882806 ~ 29901937 (-)
map6a map6,LOC102787944,LOC103142112 other upstream 1578207 29945668 ~ 29971080 (-)

Expression


Co-expression Network