acat1 (acat1)


Basic Information

Item Value
gene id acat1
gene name acat1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30688426 ~ 30696741 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777676.1
CTCTTACTGTGATTGGATGATATTTTCATCCCTTCTCTGAAGGTGAAGTCGGTCCCAGTGAAGTGAGTCAGTGGCAGTGTTCACAAGTCATCTCCTAGTCCAACATGTCTTCCAGTGGACTTTTAACCATGCGCGCTCAAATTTGTAAACGCCTGGCTCACAAGTACCTCTCAAGAACCTACACATCTCGCCCTTCACTCAATGAAGTCGTCATTGTCAGTGCAGTCCGCACTCCAATAGGCTCCTTCAGAGGCAGCCTGGCAGCAGTGCCAGCCACCAAACTGGGCTCCATTGCCATCAAGGGAGCCATAGACAAAGCAGGAATTGCTCCTGAAGAGGTAAAGGAAGTCTACATGGGCAATGTGCTTCAAGCAGGAGAAGGACAGGCCCCCACAAGACAAGCCTTGCTTGGAGCAGGCTTGACCCTCGGCACTCCAGCAACAACAATCAACAAAGTCTGTGCGTCCGGGATGAAGTCCATCATGATGGCAGCTCAAAGTCTAATGTGTGGACACCAGGATGTGATGGTGGCAGGAGGCATGGAGAGCATGTCCAATGTACCTTATGTGATGACCAGAGACACCCCAATCTACGGAGGAGTGAGGATGGAAGACCTCATTGTCAAGGATGGACTCACTGATGTCTATAACAAATTCCACATGGGCAACTGTGCGGAAAACACAGCCAAGAACAGCAACATCACCAGAGAGGAGCAGGACGCCTACGCCATCAGCTCGTACAGCCGCAGCAAAGCAGCATACGAGTCTGGCTTGCTGGCCAAGGAGATTGTACCAGTCAGCATTCCCCAGAAAGGCAAACCTGATGTGGTCGTGTCCGAGGATGAAGAGTGGAGGAGGGTCGACTTCAGCAAAGTTCCCAAACTGAGAGCAGTGTTCCAGAAAGAGAATGGCACGGTGACGGCAGCCAATGCCAGCACCCTTAACGATGGAGCTGCCGCTCTCGTTTTAATGACCGCAGATGCTGCAAAGAGACTCAACGTCACTCCACTGGCCAGGATTGTCTCTTTTGCTGATGCTGCTGTTGCACCCATTGATTTTCCCATTgctcctgcatttgctgtacCAAAGgtCCTGGCTGCAGCAGGGCTGAAGAAGGAGGACATCACCATGTGGGAGATCAACGAGGCCTTCAGCGTGGTCGTGCTGGCCAACATCAAGATGTTGGACATCGACCCTGTAAAAGTCAACGTCAACGGGGGAGCTGTGTCACTGGGACACCCCATCGGGATGTCTGGGGCCAGAATTGTGGGCCACATGGTCCACAGCCTGAAGTCAGGCCAGTACGGGCTGGCAGGCATCTGCAACGGAGGTGGTGGAGCTTCATCCATTGTGATTCAGAAATTGTAGGAAACTTGATGGGGAACCTCTCTCTCCCTGGTACACTCTTTATTTCAAAGTGTTCACTACCTGTTGATACTAAATGATTAAGGCATCTGTAAACTTCCTTTTACTGTGAAGAATGCTTCTGTTACAACTGTGGCCTTACTGAACAGTAATGTAGGGtgacatgacatcatgactcaTTTGTTTTATGAAACCTATTGTGCAAAAAAtgatatattaatatttaaatctgAATTAAAATGgttaaatagatttttataaAA

Function

symbol description
acat1 Predicted to enable acetyl-CoA C-acetyltransferase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to act upstream of or within fatty acid metabolic process. Predicted to be active in mitochondrion. Is expressed in liver. Human ortholog(s) of this gene implicated in beta-ketothiolase deficiency and carbohydrate metabolic disorder. Orthologous to human ACAT1 (acetyl-CoA acetyltransferase 1).

NR:

description
acetyl-CoA acetyltransferase, mitochondrial

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups molecular_function

KEGG:

id description
K00626 ACAT, atoB; acetyl-CoA C-acetyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777676.1 True 1627 mRNA 0.49 12 30688426 30696741

Neighbor

gene id symbol gene type direction distance location
tmprss2 LOC104945283 coding downstream 4738 30677099 ~ 30683688 (-)
dscama NA coding downstream 64032 30510724 ~ 30624394 (-)
stt3a stt3a coding downstream 406362 30267597 ~ 30282064 (-)
thap12a NA coding downstream 427232 30256061 ~ 30261194 (-)
si:dkey-250d21.1 LOC103363043,LOC104956247 coding downstream 434076 30239106 ~ 30254350 (-)
mmp30 NA coding upstream 625 30697366 ~ 30701630 (-)
LOC120575605 LOC104951202 coding upstream 5759 30702500 ~ 30709341 (-)
LOC120543889 NA coding upstream 156815 30853556 ~ 30857220 (-)
LOC120543607 NA coding upstream 162860 30859601 ~ 30875760 (-)
acer3 acer3 coding upstream 193751 30890492 ~ 30901561 (-)
G169956 NA non-coding downstream 235920 30450547 ~ 30452506 (-)
G169941 NA non-coding downstream 259370 30428848 ~ 30429056 (-)
G169928 NA non-coding downstream 300371 30387854 ~ 30388055 (-)
G169927 NA non-coding downstream 322789 30351873 ~ 30365637 (-)
G169912 LOC103363040,LOC108244715 non-coding downstream 421992 30264550 ~ 30266434 (-)
G170054 NA non-coding upstream 32261 30729002 ~ 30731888 (-)
LOC120543896 NA non-coding upstream 91728 30788469 ~ 30791876 (-)
G170078 NA non-coding upstream 191265 30888006 ~ 30889575 (-)
G170085 NA non-coding upstream 216961 30913702 ~ 30914239 (-)
G170092 NA non-coding upstream 240165 30936906 ~ 30937273 (-)
si:ch73-1a9.3 NA other downstream 273691 30411229 ~ 30414735 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other downstream 347180 30306849 ~ 30341246 (-)
ei24 ei24 other downstream 393896 30283080 ~ 30294530 (-)
map6a map6,LOC102787944,LOC103142112 other downstream 717346 29945668 ~ 29971080 (-)
LOC120543707 c2cd2 other downstream 786489 29882806 ~ 29901937 (-)
LOC120575604 NA other upstream 21474 30718215 ~ 30732082 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other upstream 40824 30737565 ~ 30830309 (-)
LOC120543892 LOC103394800 other upstream 150257 30846998 ~ 30851054 (-)
G170098 NA other upstream 260760 30957501 ~ 30958498 (-)
G170463 NA other upstream 1504968 32201709 ~ 32202206 (-)

Expression


Co-expression Network