cxadr (cxadr)


Basic Information

Item Value
gene id cxadr
gene name cxadr
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 29707207 ~ 29748583 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039777713.1
CGCGCTCCGCTGTgcacctgcagagagagaagaggagaaggaggagtggAGTTTGGATACCTCGGTCGAGCTGGACTGCCGCTTTTCACTCGAACTCAGCACAAGTTCTCCAACCAAGTTTTAGTGAAGAAGTCGTGGAATAGCTGGGACAGGAATGGAGCTTTCGTCAGGCCGGTTTTGCTGTGTACTGTTGAGCCTCTTTGCAGGTTTGGCCTCTGGTCTAGAGATCACGTCTACGGCGCCGACCTCCATAGAGACGGCCAGCGGGCAGAGTGTGAAGCTGGACTGCCAGTTCACTCTGGCCCCGGAAGATTCTGGACCGCTGGATATTGAATGGAGCTTGTTGTCCTCTGACAACCAGAAAGAGGACAAAGTGGTGATCCTGTACTCTGGCGACAGGTCCTACGAGGACTACTATGAACCAATGAAGGGTCGAGTCCACTTCAACTCGGCCGACCCCAAGAACGGCGACGCCTCCATCAACCTGACGGGGCTGAAGTCGTCCGACTCGGGCACCTACCAGTGTAAGGTGAAGAAGGCTCCCGGTATCCGCAGCAGGAAGATGCTACTGATCGTCATGGTGAAGCCATCCAAGCCCAGGTGCTACGCCGAAGGCCCCACACAGGAAGGCAAAGACATTGTGCTGAGGTGCATATCTAACGAGGGCACCAAACCCCTGCAATACAGCTGGGAGAAGACCAGTGACACCAAGCTGCTGCCCAGCTCTGCTGTGATGGATCCAGTGGGAGGCACCATTAACGTGAGGAACGCATCTGCCAGCACATCTGGCACCTACCGCTGCACTGCCAATAACCGTGTTGGCTCTGAGGAATGTATTCTGTATCTCAACGTGACACCTCCCCCCAACACTGCAGGCATCATCGCAGGAGCCATAATTACTGTACTCCTGATCCTCCTCATCATCGCCATCATCCTCTTCTGCTGTTGCCGTGCCCGTAACCGGAAGAAGTATGAGAAGGAAATCTGCAATGAGATAAGAGAGGACGTGCCCCCTCCTAAGAGCCGCGTTTCGATGGCGCGCAGCTTCACCGTGGGCAGCCAGCGCTCCTCGTTGGGCTCCATGTCCCCCTCCAACCTGCACGAGTACGCCCTGAAGCCCCAGTACGACAAGATTCCCTCGTCAGAGGAGTTTGAGAGGCCTCCGAGCCACGCCCCTCTGCCCCCGCCCACTGCTGCCAGGATGGCCGGCCCCAACCTCAGCCGCATGGGGGGCATCCCGGTCATGATCCCTGCCCAGAACAAGGACGGCTCAATCGTCTAGCCTGTCCTCGAGAAGTGGCCGTGCAACgaggggagggatggaggaagtAGGACACAAGCCACTGAAGATGGAGCGAGAGCTGGGATAGGGCTGACTCGCCTGACCTTTAGCTCTTCAATATTTACAAATGGGAGTACCCTCCTCCTTATGAAGGCCTGGCTCTGCGTTGGTGCTGAGAAGAGAAATTGAATTGTACTGGAAACCCAACAGAGCACATTAACTTTTTatcaaatataaatacaaaaaaacttaTGAATTTTACTTCCTGGATTTTCTCACTGAAAAATGAATTGGGGTGGATATGAAGCAGAATGGTCAATATACAAATTATATTGTACATAACGTgaatgcatgtgtttttttttgtttttgttttttttttaaatatagaagGCCCTTGCGGTAGAGATATTCTATGTTCAAAACAGATCCAGGCCCCTAATTGGCCAGCTTTACagctgtatgcatgtatgtataaaATTGCAGCTGTAAGCGTGTGTGTGAATATAAGTGTATGTTTGTGAATGGGAGTTTTGGAAATGTATAGTTCATTTCTCGTCTTTTAATGCCTACATGATGATCATTGGTCAGGAAATCCAGTCACTACTCGTTTTTCTGACATCTCTAATTCCATAAATGTATTCTATTGACCTTTTGGAAAAATGGAAAGACAgacttattaaaagaaaattcaCCAATTTGAA

Function

symbol description
cxadr Enables virus receptor activity. Acts upstream of or within kidney development. Located in bicellular tight junction and cell surface. Is expressed in several structures, including digestive system; epithelium; heart; nervous system; and pronephros. Orthologous to human CXADR (CXADR Ig-like cell adhesion molecule).

NR:

description
coxsackievirus and adenovirus receptor homolog

GO: NA

KEGG:

id description
K06788 CXADR, CAR; coxsackievirus and adenovirus receptor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039777713.1 True 1986 mRNA 0.50 7 29707207 29748583

Neighbor

gene id symbol gene type direction distance location
rnft1 rnft1 coding downstream 729829 28971468 ~ 28977378 (-)
ptrh2 ptrh2 coding downstream 829322 28875990 ~ 28877885 (-)
pdzd3b NA coding downstream 891649 28811383 ~ 28815558 (-)
ftr83 LOC104966638,LOC103395195,LOC103359484,LOC102224482 coding downstream 916089 28785102 ~ 28791118 (-)
ruvbl2 ruvbl2 coding downstream 924346 28774813 ~ 28782861 (-)
btg3 LOC102786047 coding upstream 7144 29755727 ~ 29761675 (-)
c16h21orf91 LOC102786549,LOC102292364,LOC101464061,LOC103361253 coding upstream 58262 29806845 ~ 29826242 (-)
ripk4 ripk4 coding upstream 85007 29833590 ~ 29850225 (-)
prdm15 prdm15,LOC102786849 coding upstream 101202 29849785 ~ 29879284 (-)
zbtb21 zbtb21 coding upstream 155945 29904528 ~ 29912667 (-)
LOC120544741 NA non-coding downstream 28342 29668382 ~ 29678865 (-)
G169678 NA non-coding downstream 556729 29149084 ~ 29150478 (-)
G169648 NA non-coding downstream 707470 28999480 ~ 28999737 (-)
G169640 NA non-coding downstream 760551 28946310 ~ 28946656 (-)
G169620 cltc non-coding downstream 840119 28865481 ~ 28867088 (-)
G169766 NA non-coding upstream 30109 29778692 ~ 29789550 (-)
LOC120544726 NA non-coding upstream 176484 29925067 ~ 29926453 (-)
G169905 NA non-coding upstream 297558 30046141 ~ 30115419 (-)
G169912 LOC103363040,LOC108244715 non-coding upstream 515967 30264550 ~ 30266434 (-)
G169927 NA non-coding upstream 603290 30351873 ~ 30365637 (-)
atp5l atp5l,LOC102215954 other downstream 898766 28804378 ~ 28808441 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other downstream 1043156 28654877 ~ 28664051 (-)
LOC120575713 mlxipl other downstream 1359717 28314169 ~ 28347490 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other downstream 1394074 28217243 ~ 28313133 (-)
LOC120544668 tspoap1 other downstream 1584589 28047607 ~ 28122618 (-)
LOC120544028 LOC107730113 other upstream 13866 29762449 ~ 29796427 (-)
LOC120543707 c2cd2 other upstream 134223 29882806 ~ 29901937 (-)
map6a map6,LOC102787944,LOC103142112 other upstream 197085 29945668 ~ 29971080 (-)
ei24 ei24 other upstream 534497 30283080 ~ 30294530 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other upstream 558266 30306849 ~ 30341246 (-)

Expression


Co-expression Network