ggnbp2 (ggnbp2,LOC102784373)


Basic Information

Item Value
gene id ggnbp2
gene name ggnbp2,LOC102784373
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 27659196 ~ 27666736 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778151.1
AATGCGCCCCCTGGAGGCCACGTGCATTACAACGTCAGCTACGTAATGTGCGGAGGGCAAAGGTCAAATCAGCAATGAAGATTCCGCCACCGTAGCAGCCTCACTTACTGTCGCActtgtttattattttaaggGGAGCTCACAGAAACGGGCGAGCTGCACCCCAGCCAAACTGGAAGAGGTCATGGCACGTCTGGTAGCAGTTTGCAGGGAAGGGGAAGAGGACTACCCATTTCTCGCCAGACAGATCCCCCTGTGTATTGATGATACTCTCACGATGGTGATGGAATTTTCTGATGGTGTCATGGGTGTTGACAGCCAAGAAATAAGCACGTCTCATTGGAAACAATTTTCTGAGTATCACTCCAAGTTGAAGCAACAGGACTTGAATATTGCCCTGATGGTGACCTCCAGAGAGGTGTACAGTGCATTATCTCAGCTGGTGCCATGTGTGGGCTGCAGACGAAGTGTGGAGCGCCTCTTCTCACATTTGGTGGAATCGGGGAACCCAGCCCTGGAGCCCCTCACACTCAAACCCACAGGCATGCTCTCTGTCACCAAAGCCTGTTTAGCAGATGTAAAGAAGCTCTACAACCTTTTCTACATCCACGGGTCAAAGTTGAATGACATGATTGATGCCATTCCAAAAAGCAAAAAGAACAAACGCTGCCAGTTACACTccttagacacacacaaacctaaaCCTTTGGGTGGAAGCTGGATGGATGTGTGGGAGCTGATGTCTCAGGAGTGCAGGGATGAGGTGGTCCTCATTGATAATGCTTGTCTCTTAGAGACACTGGAGACATACTTGCGTAAACACAGGTTTTGCACTGACTGTAAGAATAAAGTGCTGAGGGCATACAACATCCTGGTGGGGGAGTTGGACTGCAGTAAAGAGAAGGGGTATTGTGCTGCCTTGTATGAGGGACTATGCTGTTGCCCCCACGAACGCCACATCCATGTGTGCTGTGAGACTGACTTCATTGCTCATCTCCTCGGCCGGGCAGAGCCTGAGTTTGCAGGAGGCTATGAACGCAGAGAGCGACATGCCAAGACCATTGACATTGCACAAGAAGAAGTCCTGACCTGTCTGGGTATTCACCTGTATGAGCGGCTGCACAGGATCTGGCAGAAACTACGAGCAGAGGAGCAGACCTGGCAGATACTGTTCCATTTGGGAATTGATGCACTACGCAAAAGTTTTGAGATGGCCGTGGAGAAAATGCAGGGGATCAGTCGGCTAGAGCAGTTTGTTGAGGAGCtgtctgaggaggagagggcCAAAGAGCTGAAGCAGGAGAAAAAGAGGCAAAAGCGCAAAAATCGTCGCAAAAACAAGTGTGGCTTTGACGTATCTGAACAGGAGGGAGAGGACAAGGAGAAAAATCTGGATGAGGGTTCTCTTGAGTCTGTGGAGGGCACTTGCAAGGTCTGTGGTAGCcatgatgaggaggaagaggaggaggaggaggccagATGTGTTCAGAGCGTCGTCACCAATGGAAGCACGTCCTGTAGCTGCCGAGACGACATGAAACAGGATTTGTCTCCTCACAGCAATGGTAGTGACTGTGGCTACTCCTCAAGTATGGAGGGCAGTGAGACAGGATCGCGGGAAGGTTCTGATATTGCCTGCTCTGAGGGAATATGCAACCATGACGATGCAGGAGATGACTCAAACGCCCATCGCTGTGCTGAGGACAAGGAGGAGGATGGAATAGACAGTTGTGTGGACTGCTGGCCACACTCTGTGGAAAACACTCAATGCAagagtaaaaagaagaaaaggaagggCAAGGGGTTATGCAATGATCAGtcatCCGCATCATTGCACACTTGCCGAACCAAAGAAATCTTTTCCTCCTTATGTGGCGATACATTTGCCAGGATTGCACTACAGTTACCATGgacagtaaataataataacctCAACCTTGAAGCGAGGCCTCCAGAGGCAAACACAAGTCTCATGGAACTTCTGGATGACTCGGAAGTGATTTCAGATGAAGAGAATTATCTGACACAGGATGAAATCCAAGCGTTTTTGGAAAGAAACCAGTCCTTCTACAACAACCGCCATCAGTACCGACAGCTCCTGAAAGAGAAGTTCACCAACTACTGCCGCACCACTGAGCGGAGTAAGCCAGTCTGCGGAAAGTGGTTTACCACCACCAGTGTCAACTAACTGCACTAATGGTATCTTCCCTGGGGAAAAAACACTCGTTACCACTGCTGCAACATCTTTAGGAAAGATACAATCCTGAAGTACATTTGATGTCTTATTCAGTCTTTTCATCGTTAAAGTAAATTTGATTCTTACTTTCTGTTGATCATCGCTCTCTTTCACACTTACACCAACACTTTTCTATcatttttttggccactttcTCACCCGTAAGTGTTCTCTTTGACCAAGTCTAGCTATTTGTTGTTGGTCTTCTGTAGGGTTGTTTGGTAAGAGCACAGTGGAATCAGTAATCAAGCTTTGCAAGCTGTGTCATTAGGAAAACATCTTAGTAGTCTTAtgtttgtctatttttttttttttttttattcggtGACACTTTGGTGTAGTGGTAAAGGTTGTACCATTAAATGTGTACAGAAATTCTAAATATAAAGATTTTACAGAGAATAAACATCCATTTGTAACAAGGATCTGGGTGTGATGTTAAGGGCGCACTGTGCAAAATTTACTAAATAAAGAgtatttattaatatgcattacaaa

Function

symbol description
ggnbp2 Predicted to be active in cytoplasm and nucleus. Orthologous to human GGNBP2 (gametogenetin binding protein 2).

NR:

description
PREDICTED: gametogenetin-binding protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778151.1 True 2734 mRNA 0.47 14 27659196 27666736

Neighbor

gene id symbol gene type direction distance location
dhrs11a dhrs11 coding downstream 959 27637955 ~ 27658237 (-)
LOC120543974 flot2,LOC103376511 coding downstream 33230 27605381 ~ 27625966 (-)
fam222ba fam222b,LOC102781587 coding downstream 78357 27548915 ~ 27580839 (-)
specc1 specc1 coding downstream 162194 27406845 ~ 27497002 (-)
adora2b adora2b coding downstream 253504 27389625 ~ 27405692 (-)
znhit3 NA coding upstream 26746 27693482 ~ 27698749 (-)
ca4a ca4,LOC104949315,LOC103363689 coding upstream 133477 27800213 ~ 27873238 (-)
LOC120544612 NA coding upstream 149471 27816207 ~ 27832205 (-)
mtmr4 NA coding upstream 208391 27875127 ~ 27920265 (-)
hsf5 NA coding upstream 361615 28028351 ~ 28033616 (-)
G169241 NA non-coding downstream 23177 27635596 ~ 27636019 (-)
G169236 NA non-coding downstream 55282 27602391 ~ 27603914 (-)
LOC120543973 NA non-coding downstream 62632 27595820 ~ 27596564 (-)
G169226 NA non-coding downstream 74272 27547868 ~ 27584924 (-)
G169218 NA non-coding downstream 131635 27526792 ~ 27527561 (-)
G169255 NA non-coding upstream 47203 27713939 ~ 27716932 (-)
G169275 NA non-coding upstream 82569 27749305 ~ 27749558 (-)
G169289 NA non-coding upstream 123320 27790056 ~ 27794788 (-)
G169387 ssc4d non-coding upstream 496399 28163135 ~ 28203753 (-)
G169399 NA non-coding upstream 567854 28234590 ~ 28234949 (-)
emc6 emc6 other downstream 140195 27515890 ~ 27519001 (-)
flrt1a flrt1,LOC104926332,LOC103360355 other downstream 717989 26870550 ~ 26941207 (-)
gng3 gng3,LOC107559409 other downstream 966155 26688879 ~ 26693041 (-)
G168964 NA other downstream 974240 26681514 ~ 26684956 (-)
ammecr1 ammecr1 other downstream 1046479 26574929 ~ 26612717 (-)
pigw pigw,LOC107090330,LOC102785725,LOC102220786 other upstream 1945 27668681 ~ 27701551 (-)
gusb gusb other upstream 52263 27718999 ~ 27746458 (-)
LOC120544024 rnf43 other upstream 263803 27930539 ~ 28027777 (-)
LOC120544668 tspoap1 other upstream 380871 28047607 ~ 28122618 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other upstream 550507 28217243 ~ 28313133 (-)

Expression


Co-expression Network