acer3 (acer3)


Basic Information

Item Value
gene id acer3
gene name acer3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30890492 ~ 30901561 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778152.1
CGTAAGGAGGAGGGGTCGACTCGTGCGAGGACTGCTCGTGCTGTGATGGGACTACAAATCCGTTAGTACCAACAGCCTCCTGCTCTTCCATCATGGCTCCCTCGGCAGACAGGCAGGGATACTGGGGGCGGCCGACCTCAACGCTGGACTGGTGCGAAGAAAATTATGTTGCCTCATTTTACATTGCGGAATTTTGGAACACTGTCAGCAACTTGATTATGATTCTTCCTCCTATTTGTGGGGCCATCCAGACGTTTCGAGATGGCCTTGAGTTTCGCTACGTCTGCTCTTTCCTCGGACTGGCAGCTGTTGGTGTTGGTTCCTGGTGCTTCCACATGACGCTGCTATATGAGATGCAGTTACTGGACGAGTTGCCAATgatttacagtacatgcatCTTTGTCTACTGTCTaTATGAGTGTTTTAAACAAGAGAAGAGCATCAGTTTATTTCTGATTGCATTGTTATTGATCTTCAGTGTCTCAGTCACTGTGGTATACTTACAGTGGAAGGAGCCAGTCTTTCATCAGGTCATGTATGGTGCTCTAGTAGCTTGCCTAGTGATGCGATCTGTCTTCATCGTTACATGGGTGTACCCATGGCTCAGACCGCTGTGTTACACCTCCTTAGGAATCTTTTTGTTTGGGTTCCTACTGTGGAACATTGACAACATATTCTGTGACACATTAAGAGCCAGTAGACAAACGCTGCCCTCTGGTGTTGGAGTAGTAACACAGTTCCATGCCTGGTGGCATATCTTCACAGGCCTTGGATCCTACCTGCACATACTTCTTAGCCTGCAGATCAGGTCAACCTACCTCAAGTACAGACCAAATGTAAAGTTTCTTTGTGGAGTTTGGCCTACATTGCACATCGAACCACAGAAGACGAGTTGAAATGAAGGGATGGAGACCAACTGAAGGATGGGGACAGCCATATCCAGACACCATCGGCACAGGGACCTGCCAATGCCTACTGCTGCGCAATCAGCCCACAGCTAGGGCACAGGTGCACCCCAAGGCACCACCCCAGGGACCCTTTGGTTCTGCACTGTGGGGATTTACTAAACAGTATAGCACTGAGtacagtttaaagaaatggaagattttcttttcattaatcATAAGTTATTAGACTAGCTTTTCTGTAATCTTATTGAAGTGTAATGATTTTATTtgctcattcattttcaatgcaaATATGATGTAGTCCACTGCAGCTGTAAATGTTGAAGGGGGTATGGGTGTTATCTTAATTAGGGTTTGGGAAAAGGGAAAGTAATTATTCCAAAATTTCTACTAGCATATTAATTGTATTTCATTCTGTAGATATTTGAATCTCCTAAGCCTAAAGATATTTAAATAGATCCCTAAACTAAAGTCTAACTAAGACTTTAGCTTACAATACTTAAAACACAGTGTTGTCCTATCCCttttaagtagttttttt

Function

symbol description
acer3 Predicted to enable phytoceramidase activity. Predicted to be involved in phytosphingosine biosynthetic process. Predicted to act upstream of or within ceramide metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of endoplasmic reticulum membrane. Orthologous to human ACER3 (alkaline ceramidase 3).

NR:

description
PREDICTED: alkaline ceramidase 3-like isoform X2

GO:

id name namespace
GO:0006672 ceramide metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides molecular_function

KEGG:

id description
K04711 ACER3, YDC1; dihydroceramidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778152.1 True 1449 mRNA 0.44 11 30890492 30901561

Neighbor

gene id symbol gene type direction distance location
LOC120543607 NA coding downstream 14732 30859601 ~ 30875760 (-)
LOC120543889 NA coding downstream 33272 30853556 ~ 30857220 (-)
LOC120575605 LOC104951202 coding downstream 181151 30702500 ~ 30709341 (-)
mmp30 NA coding downstream 188862 30697366 ~ 30701630 (-)
acat1 acat1 coding downstream 193751 30688426 ~ 30696741 (-)
serpinh1a LOC103370387,LOC104930320 coding upstream 2070 30903631 ~ 30910364 (-)
samsn1b NA coding upstream 65070 30966631 ~ 30988577 (-)
wscd1b wscd1 coding upstream 342432 31243993 ~ 31265687 (-)
bhlha9 bhlha9 coding upstream 434440 31336001 ~ 31337657 (-)
riox2 mina coding upstream 456268 31357829 ~ 31371006 (-)
G170078 NA non-coding downstream 917 30888006 ~ 30889575 (-)
LOC120543896 NA non-coding downstream 98616 30788469 ~ 30791876 (-)
G170054 NA non-coding downstream 158604 30729002 ~ 30731888 (-)
G169956 NA non-coding downstream 437986 30450547 ~ 30452506 (-)
G169941 NA non-coding downstream 461436 30428848 ~ 30429056 (-)
G170085 NA non-coding upstream 12141 30913702 ~ 30914239 (-)
G170092 NA non-coding upstream 35345 30936906 ~ 30937273 (-)
G170106 NA non-coding upstream 120343 31021904 ~ 31022240 (-)
G170129 NA non-coding upstream 206481 31108042 ~ 31110208 (-)
G170138 NA non-coding upstream 233330 31134891 ~ 31135385 (-)
LOC120543892 LOC103394800 other downstream 39438 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 60183 30737565 ~ 30830309 (-)
LOC120575604 NA other downstream 158410 30718215 ~ 30732082 (-)
si:ch73-1a9.3 NA other downstream 475757 30411229 ~ 30414735 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other downstream 549246 30306849 ~ 30341246 (-)
G170098 NA other upstream 55940 30957501 ~ 30958498 (-)
G170463 NA other upstream 1300148 32201709 ~ 32202206 (-)
LOC120543978 fez1 other upstream 1541725 32443286 ~ 32491305 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 2667060 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 3407433 34308994 ~ 34309714 (-)

Expression


Co-expression Network