riox2 (mina)


Basic Information

Item Value
gene id riox2
gene name mina
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31357829 ~ 31371006 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778402.1
GTTCCACGTTGGTAGGAGTTTCCAGTCGGACATGTTGAGGGAAACACAACTCTGTTCACGTGGAGCGGCTCGTCTCAGCCGCTGTTGGAAAGCTCAGAATAACACGAGGAGAGGAGACTGATGAGAATTGGAAACAAGAACTAAACTGCTGTCGGGGCCATTGTGTTTCTATCCATCACAACCACTTGACTTTAGTTCAGGTCAAGGCTATGTCCAGCcagcggtgtagtctacgtgatacccagGTGAAAATGCCAAAGAAAAGCAAAGCAAAGAGTGTAAAGAGACGGGGCAGCGATGCTGATGCTGAGCAGCTCCCTCCTAAACAGAGCAGGCCAGAGCCCGGCGACACTCCGTCCCCTCTGTGCTTCAGCAGCCCAGGCAGCCTGTTCCAGAGCCTCATCCAGCCCATGGGGACAGAGCAGTTCTTCAGGGAGTACTGGGAGAAGAAACCCCTCCACCTGCAGAGGTCTGATCCCCACACAGCCTCCTACTACCAGTCTCTGTTCCAGCTGTCAGACCTGCGGGGCCTGTGCTCCCAGGATCTGGAATACTGCAGGGACGTCAACGTGGTGCGCTGCATCAACGGCAAGAAGAAAGTGCTGAACAAGCAGGGGCACGTTAAGAACAGCGTTCTCAATAAGGACTTTGTTCAGAATAAGGCCACCATCCAGTTCCACCAGCCGCAGAGGTTCAAGGATGAGCTGTGGAGGATCCAGGAGAAGCTGGAGTGTTTCTTTGGAGCCTTGGTGGGCTCTAACGTCTACATCACACCACAGGAGTCCCAGGGCCTTCCAGCTCACTACGATGATGTCGAGGTATTCATCCTGCAGCTGGAGGGACAGAAACGTTGGCTTCTCTACAATCCTACGGTTCCTCTGGCAGCGGAGTACAGCGTGGAGTCCGAGGAGAGGATCGGCAGCCCGACCCATGATATTCTACTGAAGGCGGGAGATCTTCTGTACTTTCCCAGGGGAACCATCCATCAAGCCAACACCCCAGCAGGAGTGGACCACTCCACCCACTTGACTCTCAGCACTTACCAGAGAATGGCGTGGGGGGATTTGCTGTTGGACATATTTCCCAGCTTACTGTGTGACCGCAGCAAGACTGAAGTCAGCCTGAGAGATGGCATGCCCAGAAGATTCTTACTGGGTAACGGTGAAGGCCTGGACGTCAGCAGGCAGCTGGCTGCTGGCCTCAGGTCTCTGGCTGATGAAATGGAAACAGGGATGCAGGACGTCCGCTCCACTCACATGAAGAGGGACTTCATCAGCAACAGACTGCCACCGTACATCCAACAGGAGCTGCTAACACCATctgGGAGGATTCCTGCCTTGGAGGATGTGGTGTGTTTGAGGTTTAAAGACCATATGGTGATAACCGTGGAGCCCAGCCAAGAGAGAACAgacGAGGCCACAGAGCTAGTAGTATTTGTCTTGCATTCTTTGAGGAACCCGAGGGAGAGCCACATGATGGGTGAGAGttgtgatgaagaggaggagcaggatATCTCCAGGGGTCTGCAGTTCCCCGTGTCCCACCTCCAGGCCCTGAGGCAGCTCCAGCAGGCAGAGACGCTGGCTGTGGCCCAGCTCCAGCTGCCCACACCGGAGGCCAAACTCAGTCTGCTCCTGGCTCTCTGGAGCGAGAGCCTGCTGGTTGTGCTATAG
>XM_039778403.1
TCCACGTTGGTAGGAGTTTCCAGTCGGACATGTTGAGGGAAACACAACTCTGTTCACGTGGAGCGGCTCGTCTCAGCCGCTGTTGGAAAGTGTTGATGCCTTTATGCTCTCATTCCGTCATCACTGCAGCTCAGAATAACACGAGGAGAGGAGACTGATGAGAATTGGAAACAAGAACTAAACTGCTGTCGGGGCCATTGTGTTTCTATCCATCACAACCACTTGACTTTAGTTCAGGTCAAGGCTATGTCCAGCcagcggtgtagtctacgtgatacccagGTGAAAATGCCAAAGAAAAGCAAAGCAAAGAGTGTAAAGAGACGGGGCAGCGATGCTGATGCTGAGCAGCTCCCTCCTAAACAGAGCAGGCCAGAGCCCGGCGACACTCCGTCCCCTCTGTGCTTCAGCAGCCCAGGCAGCCTGTTCCAGAGCCTCATCCAGCCCATGGGGACAGAGCAGTTCTTCAGGGAGTACTGGGAGAAGAAACCCCTCCACCTGCAGAGGTCTGATCCCCACACAGCCTCCTACTACCAGTCTCTGTTCCAGCTGTCAGACCTGCGGGGCCTGTGCTCCCAGGATCTGGAATACTGCAGGGACGTCAACGTGGTGCGCTGCATCAACGGCAAGAAGAAAGTGCTGAACAAGCAGGGGCACGTTAAGAACAGCGTTCTCAATAAGGACTTTGTTCAGAATAAGGCCACCATCCAGTTCCACCAGCCGCAGAGGTTCAAGGATGAGCTGTGGAGGATCCAGGAGAAGCTGGAGTGTTTCTTTGGAGCCTTGGTGGGCTCTAACGTCTACATCACACCACAGGAGTCCCAGGGCCTTCCAGCTCACTACGATGATGTCGAGGTATTCATCCTGCAGCTGGAGGGACAGAAACGTTGGCTTCTCTACAATCCTACGGTTCCTCTGGCAGCGGAGTACAGCGTGGAGTCCGAGGAGAGGATCGGCAGCCCGACCCATGATATTCTACTGAAGGCGGGAGATCTTCTGTACTTTCCCAGGGGAACCATCCATCAAGCCAACACCCCAGCAGGAGTGGACCACTCCACCCACTTGACTCTCAGCACTTACCAGAGAATGGCGTGGGGGGATTTGCTGTTGGACATATTTCCCAGCTTACTGTGTGACCGCAGCAAGACTGAAGTCAGCCTGAGAGATGGCATGCCCAGAAGATTCTTACTGGGTAACGGTGAAGGCCTGGACGTCAGCAGGCAGCTGGCTGCTGGCCTCAGGTCTCTGGCTGATGAAATGGAAACAGGGATGCAGGACGTCCGCTCCACTCACATGAAGAGGGACTTCATCAGCAACAGACTGCCACCGTACATCCAACAGGAGCTGCTAACACCATctgGGAGGATTCCTGCCTTGGAGGATGTGGTGTGTTTGAGGTTTAAAGACCATATGGTGATAACCGTGGAGCCCAGCCAAGAGAGAACAgacGAGGCCACAGAGCTAGTAGTATTTGTCTTGCATTCTTTGAGGAACCCGAGGGAGAGCCACATGATGGGTGAGAGttgtgatgaagaggaggagcaggatATCTCCAGGGGTCTGCAGTTCCCCGTGTCCCACCTCCAGGCCCTGAGGCAGCTCCAGCAGGCAGAGACGCTGGCTGTGGCCCAGCTCCAGCTGCCCACACCGGAGGCCAAACTCAGTCTGCTCCTGGCTCTCTGGAGCGAGAGCCTGCTGGTTGTGCTATAGCACACCACTACGTCAAAATATGAAACCCACATCAGTTGATATTTGTGTATACTACTtatgtctctttgttttgttgtgttttgtttttttctggctCCTCCTGAATAAAGCTGCCACACCTCCAGCA
>XM_039778404.1
AGTATCAGTGTTGTGGTTCCACGTTGGTAGGAGTTTCCAGTCGGACATGTTGAGGGAAACACAACTCTGTTCACGTGGAGCGGCTCGTCTCAGCCGCTGTTGGAAAGGTGAAAATGCCAAAGAAAAGCAAAGCAAAGAGTGTAAAGAGACGGGGCAGCGATGCTGATGCTGAGCAGCTCCCTCCTAAACAGAGCAGGCCAGAGCCCGGCGACACTCCGTCCCCTCTGTGCTTCAGCAGCCCAGGCAGCCTGTTCCAGAGCCTCATCCAGCCCATGGGGACAGAGCAGTTCTTCAGGGAGTACTGGGAGAAGAAACCCCTCCACCTGCAGAGGTCTGATCCCCACACAGCCTCCTACTACCAGTCTCTGTTCCAGCTGTCAGACCTGCGGGGCCTGTGCTCCCAGGATCTGGAATACTGCAGGGACGTCAACGTGGTGCGCTGCATCAACGGCAAGAAGAAAGTGCTGAACAAGCAGGGGCACGTTAAGAACAGCGTTCTCAATAAGGACTTTGTTCAGAATAAGGCCACCATCCAGTTCCACCAGCCGCAGAGGTTCAAGGATGAGCTGTGGAGGATCCAGGAGAAGCTGGAGTGTTTCTTTGGAGCCTTGGTGGGCTCTAACGTCTACATCACACCACAGGAGTCCCAGGGCCTTCCAGCTCACTACGATGATGTCGAGGTATTCATCCTGCAGCTGGAGGGACAGAAACGTTGGCTTCTCTACAATCCTACGGTTCCTCTGGCAGCGGAGTACAGCGTGGAGTCCGAGGAGAGGATCGGCAGCCCGACCCATGATATTCTACTGAAGGCGGGAGATCTTCTGTACTTTCCCAGGGGAACCATCCATCAAGCCAACACCCCAGCAGGAGTGGACCACTCCACCCACTTGACTCTCAGCACTTACCAGAGAATGGCGTGGGGGGATTTGCTGTTGGACATATTTCCCAGCTTACTGTGTGACCGCAGCAAGACTGAAGTCAGCCTGAGAGATGGCATGCCCAGAAGATTCTTACTGGGTAACGGTGAAGGCCTGGACGTCAGCAGGCAGCTGGCTGCTGGCCTCAGGTCTCTGGCTGATGAAATGGAAACAGGGATGCAGGACGTCCGCTCCACTCACATGAAGAGGGACTTCATCAGCAACAGACTGCCACCGTACATCCAACAGGAGCTGCTAACACCATctgGGAGGATTCCTGCCTTGGAGGATGTGGTGTGTTTGAGGTTTAAAGACCATATGGTGATAACCGTGGAGCCCAGCCAAGAGAGAACAgacGAGGCCACAGAGCTAGTAGTATTTGTCTTGCATTCTTTGAGGAACCCGAGGGAGAGCCACATGATGGGTGAGAGttgtgatgaagaggaggagcaggatATCTCCAGGGGTCTGCAGTTCCCCGTGTCCCACCTCCAGGCCCTGAGGCAGCTCCAGCAGGCAGAGACGCTGGCTGTGGCCCAGCTCCAGCTGCCCACACCGGAGGCCAAACTCAGTCTGCTCCTGGCTCTCTGGAGCGAGAGCCTGCTGGTTGTGCTATAG

Function

symbol description
mina bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA

NR:

description
ribosomal oxygenase 2

GO: NA

KEGG:

id description
K21760 RIOX2, MINA; bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778402.1 False 1673 mRNA 0.55 11 31357956 31370991
XM_039778403.1 True 1837 mRNA 0.54 11 31357829 31370989
XM_039778404.1 False 1535 mRNA 0.56 10 31357956 31371006

Neighbor

gene id symbol gene type direction distance location
bhlha9 bhlha9 coding downstream 20172 31336001 ~ 31337657 (-)
wscd1b wscd1 coding downstream 92142 31243993 ~ 31265687 (-)
samsn1b NA coding downstream 369252 30966631 ~ 30988577 (-)
serpinh1a LOC103370387,LOC104930320 coding downstream 447465 30903631 ~ 30910364 (-)
acer3 acer3 coding downstream 456268 30890492 ~ 30901561 (-)
hlcs hlcs,LOC102212994,LOC105419148 coding upstream 59434 31430440 ~ 31476434 (-)
ska2 NA coding upstream 138554 31509560 ~ 31528558 (-)
tiprl NA coding upstream 160651 31531657 ~ 31542171 (-)
LOC120543743 irf2bp1 coding upstream 240769 31611775 ~ 31616648 (-)
hnrnpl LOC102310682,LOC102197207,LOC103368863 coding upstream 248701 31619707 ~ 31633080 (-)
G170205 NA non-coding downstream 10428 31346574 ~ 31347401 (-)
G170202 NA non-coding downstream 66816 31290711 ~ 31291013 (-)
G170154 NA non-coding downstream 213241 31143942 ~ 31144588 (-)
G170147 NA non-coding downstream 216955 31140478 ~ 31140874 (-)
G170138 NA non-coding downstream 222444 31134891 ~ 31135385 (-)
G170209 NA non-coding upstream 11203 31382209 ~ 31382491 (-)
LOC120544288 NA non-coding upstream 195362 31566368 ~ 31590013 (-)
G170332 NA non-coding upstream 373845 31744851 ~ 31745684 (-)
G170424 NA non-coding upstream 529080 31900086 ~ 31901144 (-)
G170425 LOC103357888 non-coding upstream 531006 31902012 ~ 31906986 (-)
G170098 NA other downstream 399331 30957501 ~ 30958498 (-)
LOC120543892 LOC103394800 other downstream 506775 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 527520 30737565 ~ 30830309 (-)
LOC120575604 NA other downstream 625747 30718215 ~ 30732082 (-)
si:ch73-1a9.3 NA other downstream 943094 30411229 ~ 30414735 (-)
G170463 NA other upstream 830703 32201709 ~ 32202206 (-)
LOC120543978 fez1 other upstream 1072280 32443286 ~ 32491305 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 2197615 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 2937988 34308994 ~ 34309714 (-)
cblb cblb other upstream 3552367 34923373 ~ 35016119 (-)

Expression


Co-expression Network