bhlha9 (bhlha9)


Basic Information

Item Value
gene id bhlha9
gene name bhlha9
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31336001 ~ 31337657 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778405.1
CCGGAGGAGTCAGAGGAGGAGAATACCTGGGCTGTCGGCACAGCAGCAAACACCGACAGCCCCACTAGACAAGCCGAGCAGCGCCCAGGGAACTTCGCCGTGTCAAGTCGTCTGCAAACACAGCGTTCCAGGCAGGAAGATTCTACTCGCACTCGTCCAGCCTCCAGGGTATTGGCACAATGAGCTGCAGCAGTGTTGCAGAATCAGAGTTCTCGGAGGAAGAGCTGGAGCTGGGCGCGCTGGACCGAGGCGAGGACGACGGAAGTCCCAAGGCATCCTTCGAAGACAGCGAGAGCTCAACCAGCACCCCGAGCGACCCAGAGGAAGGCCAGACCAAGAAGCGCAATCGACCCGTCCGCTCAAAAGCTCGAAGGATGGCCGCCAACGTCCGGGAGCGGAAACGCATCATGGACTACAACCAGGCCTTCAATGCCCTGCGCGTTACCCTGAACCATGACCTCAGCGGCAAGCGGCTCTCCAAGATCGCCACGCTGCAGAGGGCCATCAATCGCATCTCTGCTCTCTCAGTGTTCCTGAGCTCCAACCCCCCCGGCAAGCCCTGCACCCACCGGGAGTGCAACAGGTCATCGGTGGGGCCAGCTGCGGTGGGAGCGTCTCGACTCGAGCACCCCAGGGTCACGCTTCCTCGCGTGGATCATCAGAGCTACGTCCCCTGGCACGCGTCCATCTCTCACCAGATGCAGCCACAACAAGGGCCTCATGTGCACCGGCTGCCCACGGAGCCACACGTCTACATGGATAACACCGCGTCATCATGCCCCCCGTCGCCACACTACCCTTGTTATCCCACTGAGGGACAGCTTTACGCCTCGTACGGACACTGCGGCAGCCCCCACGAGCATCCGCCCAGCCCCCTGCGATACCCTCAGGTGGGTGAGGGGTTGGGCTACCAGCCGGGGATGTGGGCCCCCTGCAGTCAGAAATACATGGACCCTTTCGTGGAGCCTTCTCCAGCTCTGGGGCTTCCCTGGCAGGTGAGCTACCTGCAGGAGCCGGAGCACAGCCTCTGTCTGGGCTCTGACATACTGTAACGGGCGACACCCACCACTGGGAGCCCCCGAAGACTGCTCATAGCACTACTGGACTGCTGAATGACCTCAGGGAGAAAAGGTTTTGGTGTTTCTTCTGTTGCAATCAATTGAGTATTACAGTCACACTCTCTTATTTTAGAGCAGAGTCATTGCAATAACAGATATAAATACAAGTGCAATGGCAGTCAAGACTGCAGAATGTTGTATATATCAGGAAATGTATTTTGATCTGGCCtttcaaaatgttaaatataaagaATGTGTCCGCTGTAAATAATTCACCCACAGAATTGTGTTCTGTGGTCGTTTGATTGTCATCGTTTGGTCTTCTGCAGAACCTGAAATATGGGAGATTATGCTACATTACTAAATGTGTGATAAGAAAAGGCAACATAAACACTTACAGCTGAGTAAGACCCGTGATGAGCCATTAGTAGACCAATCAACAAACATGGGTCAGCTTACACACTGTATGTGCTATTCTGAGGAAATGTGACTAAGATTTGAACCCAACGTTCAACATTTGTTAGTGTATTTATTCTCTGTATTGCATCAAAAGTCATGGCTGTTTGTAAAGTTGTAAAGAGTTTGTACATAATTTTCCA

Function

symbol description
bhlha9 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Acts upstream of or within pectoral fin development. Predicted to be located in nucleus. Is expressed in pectoral fin. Orthologous to human BHLHA9 (basic helix-loop-helix family member a9).

NR:

description
PREDICTED: class A basic helix-loop-helix protein 9

GO: NA

KEGG:

id description
K24145 BHLHA9; class A basic helix-loop-helix protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778405.1 True 1657 mRNA 0.54 1 31336001 31337657

Neighbor

gene id symbol gene type direction distance location
wscd1b wscd1 coding downstream 70314 31243993 ~ 31265687 (-)
samsn1b NA coding downstream 347424 30966631 ~ 30988577 (-)
serpinh1a LOC103370387,LOC104930320 coding downstream 425637 30903631 ~ 30910364 (-)
acer3 acer3 coding downstream 434440 30890492 ~ 30901561 (-)
LOC120543607 NA coding downstream 460241 30859601 ~ 30875760 (-)
riox2 mina coding upstream 20172 31357829 ~ 31371006 (-)
hlcs hlcs,LOC102212994,LOC105419148 coding upstream 92783 31430440 ~ 31476434 (-)
ska2 NA coding upstream 171903 31509560 ~ 31528558 (-)
tiprl NA coding upstream 194000 31531657 ~ 31542171 (-)
LOC120543743 irf2bp1 coding upstream 274118 31611775 ~ 31616648 (-)
G170202 NA non-coding downstream 44988 31290711 ~ 31291013 (-)
G170154 NA non-coding downstream 191413 31143942 ~ 31144588 (-)
G170147 NA non-coding downstream 195127 31140478 ~ 31140874 (-)
G170138 NA non-coding downstream 200616 31134891 ~ 31135385 (-)
G170129 NA non-coding downstream 225793 31108042 ~ 31110208 (-)
G170205 NA non-coding upstream 8917 31346574 ~ 31347401 (-)
G170209 NA non-coding upstream 44552 31382209 ~ 31382491 (-)
LOC120544288 NA non-coding upstream 228711 31566368 ~ 31590013 (-)
G170332 NA non-coding upstream 407194 31744851 ~ 31745684 (-)
G170424 NA non-coding upstream 562429 31900086 ~ 31901144 (-)
G170098 NA other downstream 377503 30957501 ~ 30958498 (-)
LOC120543892 LOC103394800 other downstream 484947 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 505692 30737565 ~ 30830309 (-)
LOC120575604 NA other downstream 603919 30718215 ~ 30732082 (-)
si:ch73-1a9.3 NA other downstream 921266 30411229 ~ 30414735 (-)
G170463 NA other upstream 864052 32201709 ~ 32202206 (-)
LOC120543978 fez1 other upstream 1105629 32443286 ~ 32491305 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 2230964 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 2971337 34308994 ~ 34309714 (-)
cblb cblb other upstream 3585716 34923373 ~ 35016119 (-)

Expression


Co-expression Network