LOC120544612


Basic Information

Item Value
gene id LOC120544612
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 27816207 ~ 27832205 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778495.1
TAAGTATAAGACCCCCTGCAAGAATGCAATCACATTGGAAAAAACAAGtcattgtgttgtcttccccagGTCGAGTCAGCTCCAAAATGCAGCAGCTAATCCTGCCCGTTCTCCTGGCATCCTTTTGGACCATCTGCACAGGATCAGGAGattGGTGCTATCAGTCCCAGTTCACCTGCGATAATATGTGCAATAcACCAGACAAGTGGGGCGAGACCTACAGCGACTGTGTTGGAAACTCCCAGTCACCCATCAACATTGTCACCAAAAACACTTTGAAAGACGAACGACTGACTCCTTTCATCTTTACCAACTACCAGGAGGTCTTCAGTGACACGATAACGAACATCGGCTACTCAGTTAAGGTTGGAGTTCCTACCTTCAGCACCATCTCAGGTGGAGGCCTCCCGACCACCTACAAGGCTTTGCAGTTCCTCATGCACTGGGGCAACAGCGAAAGGCCCGGTTCTGATCATACCATCGATGGAGAGCGGTATCCCATGGAGCTGCACATCGTTCACGTGAAGAAGGATTACGATGATCTGGAAACAGCTCTATCAGACCCAGAGGGAGTTGCAGTCCTTGGGTTCCTCTTTGAGACGTCCAAAACAGCAAACCAATGGTATGACCCCATCATCGGCGCTCTGCCAAGCATCACAGCTATAGATAGCGAAGCTCCTCTGGAGTCCATCTCCCTGGCACAACTAATCCCAAATGAGACGAATCTGACCAGCTTCTACCGCTACAAGGGCTCTCTGACCACCCCAGGGTGCAATGAGGCTGTAATTTGGACTGTCTTTAAGACTACCATCCCTCTGAGCATGGATCAGCTAACGGTGTTCTCTGAGGTTCTGCTCGAAGATGAAACGCCAATGGTGGGGAACTTTAGGCCGGTTCAGCCCCTGAACGATCGGAAGGTGTTCCGGTCGGGAGGCGCAGTGATCCTGGTCAGTTCTGCCCTTCTCCTGGCCGCCATCGCCACGGCCTTGGGACTGTCGCAACCCAACTAGAGCAAGGCATCCTGTGCTGCACTGCGACATCCATGAACACAATAAATTCAGTTTGACTCCTCAGCTCAA
>XM_039778496.1
GTCTTCACtggcaactagctagctagctaacttgtaGCACAAAATTGGGGTTTTTTTGCTTAAAGAAAGGGACACAACAACTAACTGGTCGAAACCAGTAGAAAAGCAACTAGCTAACTAAACATTCAAGGCAGCGGTAGAAGAGCTtttctgcgagGTCGAGTCAGCTCCAAAATGCAGCAGCTAATCCTGCCCGTTCTCCTGGCATCCTTTTGGACCATCTGCACAGGATTAGattGGTGCTATCAGTCCCAGTTCACCTGCGATAATATGTGCAATAcACCAGACAAGTGGGGCGAGACCTACAGCGACTGTGTTGGAAACTCCCAGTCACCCATCAACATTGTCACCAAAAACACTTTGAAAGACGAACGACTGACTCCTTTCATCTTTACCAACTACCAGGAGGTCTTCAGTGACACGATAACGAACATCGGCTACTCAGTTAAGGTTGGAGTTCCTACCTTCAGCACCATCTCAGGTGGAGGCCTCCCGACCACCTACAAGGCTTTGCAGTTCCTCATGCACTGGGGCAACAGCGAAAGGCCCGGTTCTGATCATACCATCGATGGAGAGCGGTATCCCATGGAGCTGCACATCGTTCACGTGAAGAAGGATTACGATGATCTGGAAACAGCTCTATCAGACCCAGAGGGAGTTGCAGTCCTTGGGTTCCTCTTTGAGACGTCCAAAACAGCAAACCAATGGTATGACCCCATCATCGGCGCTCTGCCAAGCATCACAGCTATAGATAGCGAAGCTCCTCTGGAGTCCATCTCCCTGGCACAACTAATCCCAAATGAGACGAATCTGACCAGCTTCTACCGCTACAAGGGCTCTCTGACCACCCCAGGGTGCAATGAGGCTGTAATTTGGACTGTCTTTAAGACTACCATCCCTCTGAGCATGGATCAGCTAACGGTGTTCTCTGAGGTTCTGCTCGAAGATGAAACGCCAATGGTGGGGAACTTTAGGCCGGTTCAGCCCCTGAACGATCGGAAGGTGTTCCGGTCGGGAGGCGCAGTGATCCTGGTCAGTTCTGCCCTTCTCCTGGCCGCCATCGCCACGGCCTTGGGACTGTCGCAACCCAACTAGAGCAAGGCATCCTGTGCTGCACTGCGACATCCATGAACACAATAAATTCAGTTTGACTCCTCAGCTCAA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K01672 CA; carbonic anhydrase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778495.1 False 1079 mRNA 0.51 8 27816207 27832205
XM_039778496.1 True 1164 mRNA 0.51 9 27816207 27830330

Neighbor

gene id symbol gene type direction distance location
znhit3 NA coding downstream 117458 27693482 ~ 27698749 (-)
ggnbp2 ggnbp2,LOC102784373 coding downstream 149471 27659196 ~ 27666736 (-)
dhrs11a dhrs11 coding downstream 157970 27637955 ~ 27658237 (-)
LOC120543974 flot2,LOC103376511 coding downstream 190241 27605381 ~ 27625966 (-)
fam222ba fam222b,LOC102781587 coding downstream 235368 27548915 ~ 27580839 (-)
mtmr4 NA coding upstream 42922 27875127 ~ 27920265 (-)
hsf5 NA coding upstream 196146 28028351 ~ 28033616 (-)
hspb1 hspb1 coding upstream 375458 28207663 ~ 28212119 (-)
LOC120544092 c1qbp coding upstream 516411 28348616 ~ 28356555 (-)
dhx33 dhx33,LOC103370271 coding upstream 526572 28358777 ~ 28367461 (-)
G169289 NA non-coding downstream 21419 27790056 ~ 27794788 (-)
G169275 NA non-coding downstream 66649 27749305 ~ 27749558 (-)
G169255 NA non-coding downstream 99275 27713939 ~ 27716932 (-)
G169241 NA non-coding downstream 180188 27635596 ~ 27636019 (-)
G169236 NA non-coding downstream 212293 27602391 ~ 27603914 (-)
G169387 ssc4d non-coding upstream 330930 28163135 ~ 28203753 (-)
G169399 NA non-coding upstream 402385 28234590 ~ 28234949 (-)
G169402 NA non-coding upstream 498447 28330652 ~ 28330971 (-)
G169417 NA non-coding upstream 524806 28357011 ~ 28357377 (-)
G169447 NA non-coding upstream 564775 28396980 ~ 28399180 (-)
gusb gusb other downstream 69749 27718999 ~ 27746458 (-)
pigw pigw,LOC107090330,LOC102785725,LOC102220786 other downstream 114656 27668681 ~ 27701551 (-)
emc6 emc6 other downstream 297206 27515890 ~ 27519001 (-)
flrt1a flrt1,LOC104926332,LOC103360355 other downstream 875000 26870550 ~ 26941207 (-)
gng3 gng3,LOC107559409 other downstream 1123166 26688879 ~ 26693041 (-)
LOC120544024 rnf43 other upstream 98334 27930539 ~ 28027777 (-)
LOC120544668 tspoap1 other upstream 215402 28047607 ~ 28122618 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other upstream 385038 28217243 ~ 28313133 (-)
LOC120575713 mlxipl other upstream 481964 28314169 ~ 28347490 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other upstream 822672 28654877 ~ 28664051 (-)

Expression


Co-expression Network