ruvbl2 (ruvbl2)


Basic Information

Item Value
gene id ruvbl2
gene name ruvbl2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 28774813 ~ 28782861 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778676.1
GAAAAAGAAGGACTTGTTTCTCCTCGGACACATTTACCCTGCGCACTATTAGAAAGAAGCGCCGCATTCTCACATTTCTGAAGTGTGGCTGCACAGATGGCGACTACAAAGGTTCCAGAGGTTCGTGACATCACGCGGATCGAGAGAATCGGAGCACACTCTCACATTCGTGGCCTTGGTTTGGATGATGCTTTGGAGCCAAGACAGGTGTCTCAGGGGATGGTTGGCCAGCTGGCCTCCCGTCGAGCAGCAGGGATCATTCTGGAGATGATCAAAGATGGCCACATAGCTGGCAGAGCAGTACTGATAGCTGGCCAACCTGGCACAGGAAAGACTGCCATCGCCATGGGCATTGCCCAGTCTCTTGGCCCTGATACACCCTTCACAGCGCTGGCCGGCAGTGAGATCTTCTCCCTGGAGATGAGCAAGACCGAGGCACTCAGCCAGGCTTTTAGAAAAGCCATCGGAGTGAGGATTAAAGAAGAGACCGAGATTATTGAAGGAGAGGTGGTGGAGATCCAGATTGATAGACCAGCCACTGGAACGGGGGCCAAGGTGGGCAAGCTGACTCTAAAGACTACTGAGATGGAGACAATATATGACTTGGGCAACAAGATGATCGACAGTCTTAGTAAAGAGAAGGTTCAAGCAGGAGATGTTATTACAATTGACAAAGCCACTGGAAAGATCAGCAAGTTGGGCCGCTCCTTCACCAGAGCCAGAGACTATGATGCCATGGGAGCTCAGACACAGTTTGTACAGTGTCCAGAGGGAGAGCTGcagaagaggaaagaggtgGTCCACACAGTGTCCCTCCACGAGATCGACGTCATCAACAGCCGCACACAAGGCTTCCTGGCTCTCTTCTCCGGAGACACGGGGGAGATCAAGTCTGAAGTCCGCGAGCAGATTAATGCCAAAGTGTGCGAGTGGAGGGAAGAGGGCAAGGCCGAGATCATTCCTGGGGTATTATTTATTGACGAGGTCCATATGCTGGACATGGAGTGTTTTTCCTTCCTGAACCGTGCCCTGGAGAGTGACTTGTCCCCAGTTCTCATTATGGCCACCAACAGAGGCATCACTCGTATCCGCGGCACAAACTATCAGAGCCCTCATGGTATCCCCATCGACCTGCTGGATCGCCTGCTCATCATCGCCACCTCCCCTTACAGCGAAAAAGAGACGAGGCAGATCCTCAAGATCCGGTGTGAGGAGGAGGACGTGGATCTGAGCGAGGAGGCTCACACCGTCCTGACTCGCATCGGCATGGAGACGTCACTGCGCTACGCCATCCAGCTAATCAGCACTGCTGGACTGGTGTGTCGCAAACGCAAGGGGACAGAAGTTCAGGTGGAGGACATCAAAAGGGTTTACTCTCTGTTCCTGGATGAGGCCAGATCCTCTCAGTACATGAAGGAGTATCAGGATTCCTTCCTCTTCAATGAAACACAAACGGGTTCAATGGACACCTCATAATGAAGATGACGGCTTTGTTTTCTTACTCTACTGAAGTTTTAATGTTGTCGAGTCGTCTCTGGGGTCAGAGTCAATTCAGAACTGGATTTTACTTTAATTTGAATTCAGCATTGAATTACTTTGAATATAGAATTCAAATGTAAAAACTCGACTGATTtccttacatttttcttttctgttcagCTTTAATTCTCACTGTTTGAAATCAAATTTATTCACTGAAATTTGACTTAATTCTGAATTTCCCACATTTCTGTTCATCATTGAGGCCTTGTTTGTGGCTGGAATATCTATATTCCgtcagtgtttcctttttttttgttgagttatcTTTACATGGTTTATTTTTatgaaaattattaaaaaagctTTCCCttaaaagtcaaa

Function

symbol description
ruvbl2 Enables ATP hydrolysis activity. Acts upstream of or within several processes, including cilium assembly; epithelial cilium movement involved in extracellular fluid movement; and regulation of heart growth. Predicted to be located in dynein axonemal particle and nucleus. Predicted to be part of R2TP complex and nuclear lumen. Is expressed in central nervous system; neural tube; posterior lateral line; and pronephric duct. Orthologous to human RUVBL2 (RuvB like AAA ATPase 2).

NR:

description
PREDICTED: ruvB-like 2

GO:

id name namespace
GO:0060420 regulation of heart growth biological_process
GO:0048565 digestive tract development biological_process
GO:0006200 obsolete ATP catabolic process biological_process
GO:0045892 negative regulation of transcription, DNA-templated biological_process
GO:0032508 DNA duplex unwinding biological_process
GO:0005524 ATP binding molecular_function

KEGG:

id description
K11338 RUVBL2, RVB2, INO80J; RuvB-like protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778676.1 True 1863 mRNA 0.48 14 28774813 28782861

Neighbor

gene id symbol gene type direction distance location
ankfy1 ankfy1 coding downstream 121329 28635713 ~ 28653484 (-)
zzef1 zzef1 coding downstream 141994 28594424 ~ 28632819 (-)
atp2a3 atp2a3 coding downstream 235685 28475913 ~ 28539128 (-)
camkk1a camkk1 coding downstream 304302 28399367 ~ 28470511 (-)
dhx33 dhx33,LOC103370271 coding downstream 407352 28358777 ~ 28367461 (-)
ftr83 LOC104966638,LOC103395195,LOC103359484,LOC102224482 coding upstream 2241 28785102 ~ 28791118 (-)
pdzd3b NA coding upstream 28522 28811383 ~ 28815558 (-)
ptrh2 ptrh2 coding upstream 93129 28875990 ~ 28877885 (-)
rnft1 rnft1 coding upstream 188607 28971468 ~ 28977378 (-)
cxadr cxadr coding upstream 924346 29707207 ~ 29748583 (-)
G169551 NA non-coding downstream 13168 28757543 ~ 28761645 (-)
G169550 NA non-coding downstream 19262 28753275 ~ 28755551 (-)
G169524 NA non-coding downstream 70192 28699821 ~ 28704621 (-)
G169447 NA non-coding downstream 375633 28396980 ~ 28399180 (-)
G169417 NA non-coding downstream 417436 28357011 ~ 28357377 (-)
G169612 cltc non-coding upstream 61563 28844424 ~ 28849113 (-)
G169620 cltc non-coding upstream 82620 28865481 ~ 28867088 (-)
G169640 NA non-coding upstream 163449 28946310 ~ 28946656 (-)
G169648 NA non-coding upstream 216619 28999480 ~ 28999737 (-)
G169678 NA non-coding upstream 366223 29149084 ~ 29150478 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other downstream 110762 28654877 ~ 28664051 (-)
LOC120575713 mlxipl other downstream 427323 28314169 ~ 28347490 (-)
srrm3 srrm3,LOC103395181,LOC102790399,LOC102288945 other downstream 461680 28217243 ~ 28313133 (-)
LOC120544668 tspoap1 other downstream 652195 28047607 ~ 28122618 (-)
LOC120544024 rnf43 other downstream 747036 27930539 ~ 28027777 (-)
atp5l atp5l,LOC102215954 other upstream 21517 28804378 ~ 28808441 (-)
LOC120544028 LOC107730113 other upstream 979588 29762449 ~ 29796427 (-)
LOC120543707 c2cd2 other upstream 1099945 29882806 ~ 29901937 (-)
map6a map6,LOC102787944,LOC103142112 other upstream 1162807 29945668 ~ 29971080 (-)
ei24 ei24 other upstream 1500219 30283080 ~ 30294530 (-)

Expression


Co-expression Network