LOC120544725 (LOC794378,LOC106676715)


Basic Information

Item Value
gene id LOC120544725
gene name LOC794378,LOC106676715
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 29920887 ~ 29923512 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778678.1
tgaaaatgagtttgacaccccgggcttagatcattaaaatagggcccttaatgttAATAGCCTGAAATTCATATTTGTAGAAGAGGCAAGAATGCTATTACATTCAAAACCTTTGCTTTTGCAGGAGAGCTGTAAGTAAAGCAACGAAGGAGTTTCATGCCTTTGGGATTGTGTCGCTCTTCCCATTTTTGAAAGACCCATACTCAAAAAAGGGATATGAACATTTCTATGACATGCAGAGCAACAAAGGCTTTCTTGAGTGGCGTATAAAAACTGTGCAGCGTCAATCCAAAACCTCATCTGCATCCCGTAACAGAGTGGAGCTGAAAGGAGGTCCCACATCGTCAAGAACATCTGGATCCATAGATGACCAGCAAACAGGAGATGAATGTATGGAGGCCATGTCTCTTCTTCACCACATTACTGACCGTGACTTTGTCTTCCAGAAGATGAAAGAAACATTCCATTATCGGCAAAAGGTGCTCCATGACCCACAGCAATCGGCAGACATACTTCAAATGTTTCCTCGTTTCTTGGACACTAAGGGACTGATTTTGCAAGACTTCTTGATGATGTTTGGAGCAGAGACTGCATCCAGGTTCCTGGAAAAATGGAACACCAGTTTTAAAGACAAAGTAATTCAAGAGGCCAGGACCCTCAGAGAGACGTCTCTCCTGaaaaaacagctgaaatctGCCCTGAATGAAGAATCTGACACTGCTGATGAGCCAGAGTGGGACAGCGACATGGCATCTCTTCTTGTATTGCTCCATCTGCTAACTCCTCAACCAGCTGGAAGGAAGCGGCCCAAAAAGATCAGTGTTGGAGAGGCAACTGATCATTTGGTTAAATTTCACAAGTCTTGCCACAGCCTTGAAGAACATCTCATGACGATAGAAGGAAACCCCCAGCCGTATCTGCTGGCCACGGGGACTTCAAAAGCACAGGTTTTCACCTTCTACATAGTCTTGGATAGAAAGCTTCTTCCATGTCAGTCTTCTACATCTCTGGGTGCATTTGATGAGCTGTTCAAGTCCCATTTTGTTTTCAGTGTGCAATATGATGATGCTCTGTCGAGCTTGTACAGATTCCTGCAGACTACTCTGTACAATATCGATATAGGGACAACAGAAGAAACTCCAAGAGTCAAAGAGTTAAGAGCAAAGCTGTTAAACAAGCACTAATTTGCTAAAGCAGCAAACATGTTCAGATGTATCCTTTGTGCGTCATCCTTTGATACAGTTTTACTTCTGTTCAGGCACCTCAAATTAATTCATGCAATGTATTCTGGGAAAAAATTTGAGACTAAAATGTGGTCAAATAGGATGTTGCTTGCAATTTTCAAGTTATTCTGGATTTAGAAGACATCTAATTAAGATACATGATCCTACTGACAACACATGTGTACCTCATGAAACCCCTTCCAACTATGACACTCAACTGCACAATCATTCTGAGTGCTTAAATGATGAAACACCCTCTACTTCATCACAATGCCAAAATGTTGAAGCAGGCCCTTCACTGTCAACTCACAGCAAAGATATGTGTGCCTCCATCATAGCCAAACTTTTGGGAAGCGGTGTACCAAATACTGTAGTTCTTTCTACAATTGAAAATTTACAGGAATTTGTGGAAGATTTGCAGTCTAATATTCAGGACCAAGTATTGAACTTACTTCCAGCTGACAATCCCTCTAGATCAGCCGTAGAAGAGCTTTTAAAAGTATGGACAACCCTTTTAGCCAGTTGAATACGGATAGCAAATGGAAGAAGTATTTCAGGGAAAAATGGGATATTGTACAG

Function

NR:

description
uncharacterized protein LOC794378

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778678.1 True 1802 mRNA 0.42 5 29920887 29923512

Neighbor

gene id symbol gene type direction distance location
zbtb21 zbtb21 coding downstream 8220 29904528 ~ 29912667 (-)
prdm15 prdm15,LOC102786849 coding downstream 41603 29849785 ~ 29879284 (-)
ripk4 ripk4 coding downstream 70662 29833590 ~ 29850225 (-)
c16h21orf91 LOC102786549,LOC102292364,LOC101464061,LOC103361253 coding downstream 94645 29806845 ~ 29826242 (-)
btg3 LOC102786047 coding downstream 159212 29755727 ~ 29761675 (-)
wnt11 wnt11 coding upstream 291027 30214539 ~ 30228165 (-)
si:dkey-250d21.1 LOC103363043,LOC104956247 coding upstream 315594 30239106 ~ 30254350 (-)
thap12a NA coding upstream 332549 30256061 ~ 30261194 (-)
stt3a stt3a coding upstream 344085 30267597 ~ 30282064 (-)
dscama NA coding upstream 587212 30510724 ~ 30624394 (-)
G169766 NA non-coding downstream 131337 29778692 ~ 29789550 (-)
LOC120544741 NA non-coding downstream 242022 29668382 ~ 29678865 (-)
G169678 NA non-coding downstream 770409 29149084 ~ 29150478 (-)
G169648 NA non-coding downstream 921150 28999480 ~ 28999737 (-)
G169640 NA non-coding downstream 974231 28946310 ~ 28946656 (-)
LOC120544726 NA non-coding upstream 1555 29925067 ~ 29926453 (-)
G169905 NA non-coding upstream 122629 30046141 ~ 30115419 (-)
G169912 LOC103363040,LOC108244715 non-coding upstream 341038 30264550 ~ 30266434 (-)
G169927 NA non-coding upstream 428361 30351873 ~ 30365637 (-)
G169928 NA non-coding upstream 464342 30387854 ~ 30388055 (-)
LOC120543707 c2cd2 other downstream 18950 29882806 ~ 29901937 (-)
LOC120544028 LOC107730113 other downstream 124460 29762449 ~ 29796427 (-)
atp5l atp5l,LOC102215954 other downstream 1112446 28804378 ~ 28808441 (-)
ube2g1a ube2g1,ube2g1a,UBE2G1,LOC107597432,LOC107722775,LOC107712369 other downstream 1256836 28654877 ~ 28664051 (-)
LOC120575713 mlxipl other downstream 1573397 28314169 ~ 28347490 (-)
map6a map6,LOC102787944,LOC103142112 other upstream 22156 29945668 ~ 29971080 (-)
ei24 ei24 other upstream 359568 30283080 ~ 30294530 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other upstream 383337 30306849 ~ 30341246 (-)
si:ch73-1a9.3 NA other upstream 487717 30411229 ~ 30414735 (-)
LOC120575604 NA other upstream 794703 30718215 ~ 30732082 (-)

Expression


Co-expression Network