serpinh1a (LOC103370387,LOC104930320)


Basic Information

Item Value
gene id serpinh1a
gene name LOC103370387,LOC104930320
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30903631 ~ 30910364 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039778679.1
TGGCCTGGATGGAAGATTCCAGTGCAGAGATTTTACTGCAGCTGTCTCAGACAACTCTGTTTCTGACCATTACATACGGTAACTTTACATAGAGGAGGTCAGCGCTGGGGGATCTATTTGCGAGCAGCTTGAGGGTAACCATCTGAATTATTGAAAGAGGCTAATAAGCACTACACAGAGATGTGGGTGACAAACCTGGTAGCCCTGGTCCTCGTGGCCACTTCAGCTTCAGCTGCCACCTCGGCTTCACCAGACAAAGTGCTGAGTAACCACGCCACCATCCTGGCTGACAACAGTGCCGAGTTGGCTTTTGGTCTCTACCAGAACATTGCTAAGGAAAAAGATGTAGAAAACATCCTCTTTTCCCCTGTAGTAGTGGCTTCCTCTCTGGGTCTGGTGGCTCTCGGGGGCAAAGCCTCCACCGCCTCTCAGGTAAAAAGCATTCTGAATGCAGCTAAGGTTAAAGATGAGCAGCTGCACGCTGGTCTGGCCGAGCTCCTGACTGAGGTGAGCGACCCAAAGACCCGCAACGTCACCTGGAAGATTAGCAACCGCCTGTATGGACCCAGCTCGGTCACCTTTGTGGAAGATTTTGTCAAGAGCAGCAAGAAGCACTATAATTGTGACCACTCCAAGATCAACTTCAGCGATAAGAAGAGCGCGGTGAGCTCCATCAACGAGTGGGCGGCCAGTTCTACTGATGGCAAACTGCCCGAGGTCACCAAGGATGTAGAAAAGACCGACGGGGCCATGATCATCAATGCTATGTTTTTCAAACCTCACTGGGATGAGCAGTTCCATCATAAGATGGTGGACAACCGTGGCTTCATGGTGTCCCGTAGCTACACTGTTTCAGTACAGATGATGCACCGCACCGGTCTCTATGGCTTCTATGATGACACGACCAATAAGTTAAATATCCTGAGCATGCCTCTGGCTCATAAGAAGTCCACTGTGGTGTTCATCATGCCTTACCATACGGAACCTCTGGACAGAGTGGAGAAGATGCTGACCAAGAAGCAGCTGGATACGTGGATGGGCAAGCTGCAACAGACAGCAATAGCCGTGTCTCTGCCCAAAGTCAGCATGGAAGTCAGTCACAACCTGCAGAAAAGCCTTGGGGAGTTGGGCCTGACAGAGGCTGTGGACAAATCCAAAGCTGACTTGTCCAAGATCTCCGGGAAGAAGGGTCTCTACCTGGCCAGTGTGTTCCACGCCTCTGCCTTGGAATGGGGAACTGATGGCAACGAAATGGACATGAGCGTCTTCAGCACAGACAAGCTGAAAAACCCTAAACTGTTCTACGCCGACCACCCTTTCATCTTCCTAGTGAAGGACCAGAAAACAAACTCCATCCTGTTCATTGGCAGGATGGTTAGGCCAAAGGGCGATAAGATGAGAGATGAATTGTAACCACATTAAGTTAACAGGCTGAatgcgtgtgtgagtgtaaaTTTTCTATTGCAATATGCCGAGAGAAGTGCAAATGCAGGTGTCATATCGCACGAGTGCATTCCTTTACCTCACATGCCAACAGCATTCCACAATACACGGCTGAAGAGATGTGTTTAAACATTTTATCCTGTGTTTTAGTGAGCAACGCATTGTGCACACCCTTCCTTTTTAACTTGAAGATTATTTGATATCACTATGTGGCTTCTTTTTGCATTGGCAGATCACATTATGGACTTAAGACTTACATTAAGTATAATTTCCCTGATTAATGCCTAAAATGTAAATGCAGGAAGACAATACCTGTGCCAGCACAAAAAAGGTTTCTGTTGACAAGTCTTAACAGTCTTTGTAAAAGGTGTACAACAATCTTACTTTTGTAGAGATTTTATGGTGCCTGTTGTTTAATTTAACAATACGTTTTAGTTTGTCAAGCACGGCTGCTTTCAATTTGTTAACTCAAAGGATCTTCACAATTGTTTGCCCATCATTTGCACTGCTTTCCACCACAAGCATATatatttttaaccaaaaggctacattgctgtttttcttattattgaCCCTCCCTGAATGCACTGATCTGCACTGGCAAACAAACCAAATTATGGCTGATTTAATAAGAACTATCTATGATACAATGTGTGCACACATGATTTGACAATTTCAAAATATGGTTTTAGACTGTTAGAAATTTTCCAATTATTTTGCAATAAAAGTGTGAGAAAAACCAAA

Function

NR:

description
serpin H1-like

GO: NA

KEGG:

id description
K09501 SERPINH1, HSP47; serpin peptidase inhibitor, clade H, member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039778679.1 True 2187 mRNA 0.45 5 30903631 30910364

Neighbor

gene id symbol gene type direction distance location
acer3 acer3 coding downstream 2070 30890492 ~ 30901561 (-)
LOC120543607 NA coding downstream 27871 30859601 ~ 30875760 (-)
LOC120543889 NA coding downstream 46411 30853556 ~ 30857220 (-)
LOC120575605 LOC104951202 coding downstream 194290 30702500 ~ 30709341 (-)
mmp30 NA coding downstream 202001 30697366 ~ 30701630 (-)
samsn1b NA coding upstream 56267 30966631 ~ 30988577 (-)
wscd1b wscd1 coding upstream 333629 31243993 ~ 31265687 (-)
bhlha9 bhlha9 coding upstream 425637 31336001 ~ 31337657 (-)
riox2 mina coding upstream 447465 31357829 ~ 31371006 (-)
hlcs hlcs,LOC102212994,LOC105419148 coding upstream 520076 31430440 ~ 31476434 (-)
G170078 NA non-coding downstream 14056 30888006 ~ 30889575 (-)
LOC120543896 NA non-coding downstream 111755 30788469 ~ 30791876 (-)
G170054 NA non-coding downstream 171743 30729002 ~ 30731888 (-)
G169956 NA non-coding downstream 451125 30450547 ~ 30452506 (-)
G169941 NA non-coding downstream 474575 30428848 ~ 30429056 (-)
G170085 NA non-coding upstream 3338 30913702 ~ 30914239 (-)
G170092 NA non-coding upstream 26542 30936906 ~ 30937273 (-)
G170106 NA non-coding upstream 111540 31021904 ~ 31022240 (-)
G170129 NA non-coding upstream 197678 31108042 ~ 31110208 (-)
G170138 NA non-coding upstream 224527 31134891 ~ 31135385 (-)
LOC120543892 LOC103394800 other downstream 52577 30846998 ~ 30851054 (-)
LOC120543890 LOC103370389,LOC108247974,LOC103394800,LOC106674904 other downstream 73322 30737565 ~ 30830309 (-)
LOC120575604 NA other downstream 171549 30718215 ~ 30732082 (-)
si:ch73-1a9.3 NA other downstream 488896 30411229 ~ 30414735 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other downstream 562385 30306849 ~ 30341246 (-)
G170098 NA other upstream 47137 30957501 ~ 30958498 (-)
G170463 NA other upstream 1291345 32201709 ~ 32202206 (-)
LOC120543978 fez1 other upstream 1532922 32443286 ~ 32491305 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 2658257 33568621 ~ 34100246 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other upstream 3398630 34308994 ~ 34309714 (-)

Expression


Co-expression Network