LOC120543660


Basic Information

Item Value
gene id LOC120543660
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 34411802 ~ 34413193 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636379.1
GTTAACCCTGCCTGACTCTGGATGTCACTGACGGTGTCCCAGTCCTGCTTCACTGCCACAACAGGAGGATCCAGCCATGGCCTCTGAAATACGGGAGGGCCAGAGACGTCACCCCATTTCCTCTTTTCCAAGAACCCATTAATGCAACTTCATGTTTCTCGGGCAGTTGACTATTGACAGTTCCTGTCTTGCCTCAAATGTTCATGGTTGCTGCGTCTATCTCATGTGCATTGTTTGCCATCTGCTGTGCCCCAGGAAGCCATGGCAgcgtgacagtgagccagcatgaacAGTACCAGGAGCCTGAAAGtgcagcagctaaatggaattcagcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636379.1 True 336 lncRNA 0.52 3 34411802 34413193

Neighbor

gene id symbol gene type direction distance location
LOC120544103 NA coding downstream 1619 34380245 ~ 34410183 (-)
vps11 vps11,LOC102793489 coding downstream 32866 34357139 ~ 34378936 (-)
hyou1 hyou1,LOC102793191 coding downstream 55530 34332890 ~ 34356272 (-)
LOC120544499 zgc:101846,LOC106525086,LOC105921220,LOC108416226 coding downstream 102967 34307928 ~ 34308835 (-)
LOC120543837 NA coding downstream 111673 34284561 ~ 34300129 (-)
dlg2 dlg2,LOC103395064,LOC106603804 coding upstream 10984 34424177 ~ 34669815 (-)
sytl2a NA coding upstream 258587 34671780 ~ 34692251 (-)
picalma picalm,LOC103372414 coding upstream 287438 34700631 ~ 34762315 (-)
LOC120543600 NA coding upstream 680340 35093533 ~ 35096581 (-)
LOC120544521 NA coding upstream 728393 35141586 ~ 35155530 (-)
G170793 NA non-coding downstream 176265 34233915 ~ 34235537 (-)
G170709 LOC104955000,LOC104935109,LOC101063545 non-coding downstream 188576 34220652 ~ 34223226 (-)
LOC120543853 NA non-coding downstream 271909 34137920 ~ 34139893 (-)
G170696 NA non-coding downstream 303999 34107514 ~ 34107803 (-)
G170679 NA non-coding downstream 858770 33552719 ~ 33553032 (-)
G170830 NA non-coding upstream 286703 34699896 ~ 34700115 (-)
G170897 NA non-coding upstream 626615 35039808 ~ 35040363 (-)
G170906 NA non-coding upstream 668046 35081239 ~ 35090028 (-)
G170919 NA non-coding upstream 696063 35109256 ~ 35109466 (-)
G170926 NA non-coding upstream 718448 35131641 ~ 35133206 (-)
G170802 zgc:194989,hist2h2l,LOC107719244,LOC108277172,LOC103356012,LOC107574861,LOC108179079 other downstream 102088 34308994 ~ 34309714 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other downstream 311556 33568621 ~ 34100246 (-)
LOC120543978 fez1 other downstream 1920497 32443286 ~ 32491305 (-)
G170463 NA other downstream 2209596 32201709 ~ 32202206 (-)
G170098 NA other downstream 3453304 30957501 ~ 30958498 (-)
cblb cblb other upstream 510180 34923373 ~ 35016119 (-)
LOC120575651 LOC105011014,LOC103356025,LOC103395028,LOC106603763 other upstream 1693621 36106814 ~ 36246233 (-)
LOC120575647 kirrel3,LOC106567547,LOC105011011 other upstream 2003730 36416923 ~ 36780232 (-)
LOC120544784 NA other upstream 2268907 36682100 ~ 36682165 (-)
LOC120544707 prrg3 other upstream 2583331 36996524 ~ 37062264 (-)

Expression


Co-expression Network