LOC120543896


Basic Information

Item Value
gene id LOC120543896
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 30788469 ~ 30791876 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005636409.1
GCGCCATTGAAGGATTGGAGCAGCACTGAACACATTTCATAATCAAGAAGACCCAGCCAGCCACCTCTTCACCTGAGGGAGAAACTGCCCAGCCCTGTCTTCCCCCAGTCAAATAACCATTCCATGTGGCAGCAGCATGTGGGTGGACAAGTTCCAGGTGCCTTGGGAAAAAATAAGGCCCCTTTCTTACCATTGATGCTGGATGTTGGAGACATACCAGGAAGATGCAGTGGCTCTGGTAGCAGTGGTCAATGAGGAGCAAGAGCCTGCAGGAATCACCTTTTTCAAACTCACCACGTCATTCATACTCAACCATCAGGTTTTAATGTGTCACAGACCTTGGATAGATATTCTGATGATTTTGTTTGGCGTTATTTATGTTTTCCAATTAAGCTACCTTAAAAagcttagtgttttttttttttaacttcatccAGAGGTTTTGTAGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005636409.1 True 451 lncRNA 0.44 3 30788469 30791876

Neighbor

gene id symbol gene type direction distance location
LOC120575605 LOC104951202 coding downstream 79128 30702500 ~ 30709341 (-)
mmp30 NA coding downstream 86839 30697366 ~ 30701630 (-)
acat1 acat1 coding downstream 91728 30688426 ~ 30696741 (-)
tmprss2 LOC104945283 coding downstream 104781 30677099 ~ 30683688 (-)
dscama NA coding downstream 164075 30510724 ~ 30624394 (-)
LOC120543889 NA coding upstream 61680 30853556 ~ 30857220 (-)
LOC120543607 NA coding upstream 67725 30859601 ~ 30875760 (-)
acer3 acer3 coding upstream 98616 30890492 ~ 30901561 (-)
serpinh1a LOC103370387,LOC104930320 coding upstream 111755 30903631 ~ 30910364 (-)
samsn1b NA coding upstream 174755 30966631 ~ 30988577 (-)
G170054 NA non-coding downstream 56581 30729002 ~ 30731888 (-)
G169956 NA non-coding downstream 335963 30450547 ~ 30452506 (-)
G169941 NA non-coding downstream 359413 30428848 ~ 30429056 (-)
G169928 NA non-coding downstream 400414 30387854 ~ 30388055 (-)
G169927 NA non-coding downstream 422832 30351873 ~ 30365637 (-)
G170078 NA non-coding upstream 96130 30888006 ~ 30889575 (-)
G170085 NA non-coding upstream 121826 30913702 ~ 30914239 (-)
G170092 NA non-coding upstream 145030 30936906 ~ 30937273 (-)
G170106 NA non-coding upstream 230028 31021904 ~ 31022240 (-)
G170129 NA non-coding upstream 316166 31108042 ~ 31110208 (-)
LOC120575604 NA other downstream 56387 30718215 ~ 30732082 (-)
si:ch73-1a9.3 NA other downstream 373734 30411229 ~ 30414735 (-)
LOC120543993 LOC103357895,LOC102211230,LOC102791592,LOC101481864 other downstream 447223 30306849 ~ 30341246 (-)
ei24 ei24 other downstream 493939 30283080 ~ 30294530 (-)
map6a map6,LOC102787944,LOC103142112 other downstream 817389 29945668 ~ 29971080 (-)
LOC120543892 LOC103394800 other upstream 55122 30846998 ~ 30851054 (-)
G170098 NA other upstream 165625 30957501 ~ 30958498 (-)
G170463 NA other upstream 1409833 32201709 ~ 32202206 (-)
LOC120543978 fez1 other upstream 1651410 32443286 ~ 32491305 (-)
ntm LOC100703630,LOC102197934,LOC101488072,LOC102307721,LOC103141059 other upstream 2776745 33568621 ~ 34100246 (-)

Expression


Co-expression Network