G184474


Basic Information

Item Value
gene id G184474
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 15478491 ~ 15479080 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249814
AGGAGAGAGGCATATGGGAAGAGGAGAGGCCATGGTGAACATGAGGGCGGCCTGAGAACACACCAGTGAAGATGCTGAGATACGACAGAGCATTCGGAACAGGTGGCGAAGCAGACAGGAGATCAGATGAAGAGACACGGAAAAAGAACCTAGAGCCCTGAAGCTACAGCGAAGAAAACACCAACACCAACCGCTAGCGGCAAAAGTGGGAGAGCGTAAAACCTCTCCCTCCGGCgtTATGCCCAAGGAAGGCGACACACGGAAAGGAAACTGCCTGCCAGCAGAACCCTGTGGACATTTTAAAGTGAAGACTCCTGTTCTGTTTAGACTGTTTTAGttgatttttagtttttaaatccttttttattttgttatttttttaaagtaatttttgtttttatccttttgttaaaataaatgtgttactcctatttgtttttactcattgttttgaatACATAGTTTTTACTGCTCTCCCCCAGTAAAAAAGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249814 True 493 lncRNA 0.42 2 15478491 15479080

Neighbor

gene id symbol gene type direction distance location
vrtn vrtn coding upstream 177784 15296281 ~ 15300707 (+)
slc25a29 LOC103369942,LOC106518591 coding upstream 191640 15277585 ~ 15286851 (+)
ppp2r5cb LOC103369946,LOC101473650,LOC100694131,LOC104924693 coding upstream 304909 15142703 ~ 15173582 (+)
hsp90aa1.2 LOC107100300,LOC103369947,LOC105919227,LOC103155532,LOC103457915 coding upstream 337098 15135367 ~ 15141393 (+)
mgat2 mgat2 coding upstream 361707 15113170 ~ 15116784 (+)
dll4 dll4,LOC104955063 coding downstream 109003 15588083 ~ 15597893 (+)
chac1 chac1 coding downstream 123255 15602335 ~ 15604166 (+)
zfyve1 LOC100698556 coding downstream 201381 15680461 ~ 15687727 (+)
stx7l stx7 coding downstream 250967 15730047 ~ 15738980 (+)
ccn2a ctgf coding downstream 293580 15772660 ~ 15776217 (+)
G184465 NA non-coding upstream 155603 15322575 ~ 15322888 (+)
G184463 NA non-coding upstream 156369 15321746 ~ 15322122 (+)
G184461 NA non-coding upstream 158252 15320018 ~ 15320239 (+)
LOC120547009 NA non-coding upstream 213774 15257133 ~ 15264717 (+)
G184431 NA non-coding upstream 275976 15202306 ~ 15202515 (+)
G184481 NA non-coding downstream 14124 15493204 ~ 15493527 (+)
G184509 vps18 non-coding downstream 175766 15654846 ~ 15655520 (+)
G184508 pigh non-coding downstream 199917 15678997 ~ 15680159 (+)
G184521 NA non-coding downstream 298149 15777229 ~ 15780546 (+)
G184526 sel1l,LOC104966051,LOC107585782,LOC107721334 non-coding downstream 318735 15797815 ~ 15798794 (+)
G184458 NA other upstream 159655 15301925 ~ 15318836 (+)
LOC120546207 NA other upstream 185239 15289674 ~ 15293252 (+)
hsp90aa1.1 LOC103369948 other upstream 343631 15129476 ~ 15134860 (+)
G184258 NA other upstream 949121 14525136 ~ 14529370 (+)
LOC120546619 LOC103359912,LOC102080314 other upstream 1053627 14393440 ~ 14424864 (+)
rhov rhov,LOC102778135,LOC100699098,LOC101469787,LOC102306362,LOC107602886 other downstream 181493 15660573 ~ 15663661 (+)
dpf3 LOC100693327,LOC101467145,LOC103380755,LOC104966071,LOC102779461 other downstream 215864 15694944 ~ 15719632 (+)
LOC120546249 NA other downstream 435506 15914586 ~ 15968123 (+)
nkain2 nkain2 other downstream 769014 16248094 ~ 16391851 (+)
cenpw NA other downstream 900399 16379479 ~ 16381856 (+)

Expression


Co-expression Network