G184540


Basic Information

Item Value
gene id G184540
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 15926071 ~ 15927662 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249901
TCAGACACATCAAGtgaaaaaaatagtttacacaaaagttacacaaaaaaataaatgtaaatccaGCAACTTAAACAAGACAAGGCAACTTAAACAAACCAGTGGACCATGGATCATGCATAAAGATCCAGACCTGAGCAAAATAGATTATTTTGTCTTCAAATATTTGAGATACTGTGAGGGCGCTAGATGCTACATTACACCAAatatcctctccagtgaaagcCACCCCAAAGTATATCAGCAGAGAGTCACCCGTCACTTTCAAATATCTGAAAtgtctttaatttatttttatcagGTCTCCGAACAAACTTACAACTTCAGGCCAGGGATAAAaccttttatttgtaaaatgagaCATTTTATATTGTTCTGAGAGTGTTCGCATCCATATTGGGTGAACAGTGTAGGAATGGTACAGCATTGTACTCTCCCAATTTTAGGGCAATGCGTAAATGATAATAGTTGCAAAGCAGGCTGGGCAGAATGGCCCAGTTACCATTGGTCCACTACAATTAGGGGACCAAGAGACTAATAGTTGGCTAATTTTAGGGGAACTCATCAGGATGTAAAGATCCTCAAATGAAAGCGGTCCAATATTTTGGTGCACAGAACAACAACTAAATGTCAGTGCCATTGCCCAAATATACTGGGACTACACTAACTCAGATGTGATCTCCTCAGTGCAGCTTTAGCATGTAGAATTCATCATATCTGGGAGGacatttttaattctttttgtttgttttttttttagacagaaAATTTAACTAATCAAGACGGCCAACAAAATCATACACAACgttgcaaaaacaaaaagcttAAGTGAAGAGACGGATGTAGCAGATCACAGCGAATGTGTGGAATCTGAGTGGGACTAATGGCATGTGGGCATGTCGGGTAAGTGATCAAATTGTGCATTCAGACTGCGAGCAACATGATAAGACATGTCACCAGACTATCTGTTCCCCTAAGCAGCCAGAAAGATTAATCTGTAGTCTTCAGCAGCTAGCTCCATCATTTCTCTTAAAAATGGCTTCCAAATTCtaaaaccaaaatgtaaaaaaaaggtgCACCTGGTTTACGGCCTCTCACCCAGCCACATTTAGTCAGAATAAAGCGACCCCTCAACCTAGTTGCTGAAATACCAAAACGAGGCGTAGGGATACGCTGTGCGACTGGAGAACTGACCTGGTCGTGGTCGATGTCACAGTCACCAGTAATGACGATGCGTTTCTCGATCCTTGTCTCAGATAGGCCGCCCTTTAACATCtgcaacaaaatacacaacgACAAAGCTTTGGTGCCTGTTATAAAGGGTTAATTATGAACTAGTATGGCCCGCGCCTGGGTGCTGGTGGGATACGGCAGAGTGGCTAGCATTGTCAAAGCAGATAAGTCAGAAATACCACGAAAACATCAAGAGAGACGGACAAAAGAACGCATAATGACAGAAAATTACAAACCCTGTAGTATGGCACTGCATGCACAGGTGCCATGGTAATATTTTATTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249901 True 1519 lncRNA 0.41 2 15926071 15927662

Neighbor

gene id symbol gene type direction distance location
tmem200a tmem200a coding upstream 48322 15853810 ~ 15877749 (+)
ccn2a ctgf coding upstream 149854 15772660 ~ 15776217 (+)
stx7l stx7 coding upstream 187091 15730047 ~ 15738980 (+)
zfyve1 LOC100698556 coding upstream 238344 15680461 ~ 15687727 (+)
chac1 chac1 coding upstream 321905 15602335 ~ 15604166 (+)
itpkb itpkb coding downstream 58421 15986083 ~ 16014859 (+)
coq8aa coq8a coding downstream 89313 16016975 ~ 16042239 (+)
med23 med23 coding downstream 181690 16109352 ~ 16126914 (+)
rnf217 rnf217,LOC106571519 coding downstream 413276 16340938 ~ 16352655 (+)
tpd52l1 tpd52l1 coding downstream 429897 16357559 ~ 16375214 (+)
G184561 NA non-coding upstream 36486 15889365 ~ 15889585 (+)
G184526 sel1l,LOC104966051,LOC107585782,LOC107721334 non-coding upstream 127277 15797815 ~ 15798794 (+)
G184521 NA non-coding upstream 145525 15777229 ~ 15780546 (+)
G184508 pigh non-coding upstream 245912 15678997 ~ 15680159 (+)
G184509 vps18 non-coding upstream 270551 15654846 ~ 15655520 (+)
G184584 NA non-coding downstream 118147 16045809 ~ 16047681 (+)
G184618 NA non-coding downstream 363549 16291211 ~ 16356548 (+)
G184633 LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636 non-coding downstream 484014 16411676 ~ 16413501 (+)
LOC120546561 NA non-coding downstream 565532 16493194 ~ 16516333 (+)
G184796 NA non-coding downstream 668278 16595940 ~ 16610380 (+)
dpf3 LOC100693327,LOC101467145,LOC103380755,LOC104966071,LOC102779461 other upstream 206439 15694944 ~ 15719632 (+)
rhov rhov,LOC102778135,LOC100699098,LOC101469787,LOC102306362,LOC107602886 other upstream 262410 15660573 ~ 15663661 (+)
G184458 NA other upstream 607235 15301925 ~ 15318836 (+)
LOC120546207 NA other upstream 632819 15289674 ~ 15293252 (+)
hsp90aa1.1 LOC103369948 other upstream 791211 15129476 ~ 15134860 (+)
nkain2 nkain2 other downstream 320432 16248094 ~ 16391851 (+)
cenpw NA other downstream 451817 16379479 ~ 16381856 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other downstream 471776 16399438 ~ 16404077 (+)
vegfab vegfa other downstream 743924 16671586 ~ 16686079 (+)
si:ch211-57i17.1 LOC103363786 other downstream 837883 16765545 ~ 16779935 (+)

Expression


Co-expression Network