G184995


Basic Information

Item Value
gene id G184995
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17281115 ~ 17299420 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250533
tttttatttgaaatgattttaaatacaaataatatactTTTCCATTTACAATGACAGTTCCTTTGTAAACAAAAGTGGCAGATAGATAGTCATTATTGGGTAGTTTGTCCAAACTGAGGCGGCCTGCCGGCCAGTCGCCTGGACAAGGTCTGTCATGGGAGAGATGGTGTCGCATTTAACCtcactgcagttttttttttttttttccccacacagCGTCAATCACTGATGCTACATTCTATTGCAGAGCGATCAATACTCAAGAGTACAATATAACCTGTTAACATACACCTGCTTTGAACACAATTACGGGAGAGTAGTGGCGTgcatgtgagtttgtgtgtatgtggtgtcaGGAGAGTGTGTCCAGAAATATTCATACCTTTATCTCTCCCACACTAACATGACACACAAGTATATACGGCAAAAGAAAACTTGTAACTGTTGAAAGCAGATATTCATGGTAAAAGATTAGTCATTTCTTTTAAACACTGTAAAGTCATCAACATACAGGAAGAGCCCATAGAGCTAAACAAGGAAGctctgatttctttctttttttgcactCGTGAGTCTAACGCATGTAAAAAACCAAGGTTAGATTggaacaaaacaagacaatgTGTTGCATGTTATAACTAGAGCTTAAGTGAGATGAAACAACTCATTTTGAATGAAAGGGGGTTCTTTTGGCTGGCCAGAACTGTTCTGTAttccacagacagacaaaccttTCCTTCTGAAATGGCAGTTGCACTAACAAAACTGAGCTTGTTCCGCTTTAATGAACAAAGAGAAAATGTGCTGGACAGAATATGCTTAGTCTTACACGAAAAGTTCCTTTTGACAGGTTCTTGTTAGCAACACTTTCATCCAGCTCATGAGTGCTGTGCGTGTCAGGGACCTCATACTCCAATCCCTTTAACACAGGGCCGCTCACATCACATCACGTACGATTGCTAATCCTCTTCCAGCGGGCAAAACTTCTTATTAGAGGCTTTGTCGTAGCAAGATCAGTGATATGTATACCAAGACTGGTGGAGCTAGAGTTTACTATgaagaaacaaaaacacttacaaaacacaaaagaagtttttttctgctttcccAAGAACCTCTGGCGCATAGCACCCAAGGACTTGTATGTGGTGGTATTTCAGTTGTATTCATAAGGCCTTTTTGGACAATGAGTATACACTGGAATGTGCTACAAttgtaaaaggaaaaaaaggatgAAGAGAAAGGAAGTCACTTCACTGGAAAGCCACAAGTATGTATCAGTATCTGAGCCCCTTAAAAAGACTGAAAACTCACAACCTGAATGTAGTATATGGACAAGAAGAGTACTCAATAATTCAAACAAATCTTAACACTGCAAGTTTTGCCATTCCCCATTATACTTGAGGTCAATTCATTTCAAGAGCCACGTGCTTTCAACCTTTTCAAACAGTTTGGCGTGGATCTCAGGGGCAGAACAGGCATCACTAACAGAACTGACTGGAGATCAGTGTCTATTGGTAGTCGTCTCCTTAAACATACAGTGAGTATAAGTACATACAAGTGACTGGCTGGTTTTGacagcgaaaaaaaaaaagaatgaaatgtGAAGAGACTCAACTGTGCCCCCCGTGCTCTGAAAGGAGCAAACGTCCCAATGGTTGACGTGATCCGCGACGAAAAGGGCTAAGGCTCTTCTGCAGTTTTAAGTGTACATTAGAAAGTATCATTTGCGTGGAAAACATCAGTGCCGAGTGATTTTTAAAATTAGGAGCAAGAGCGAGGTCATGATTTCCATATGGAGGTCatgtatttttgtaaattttgcAAACGGAATTAGTTGTTCTAcatccccctctccccctcaagaaaagaagaaaaaaacaaccagaTAATAGGTCCTTCAGTCCACAGTGTGTCAATCGTTCATACCTGTACAAACACATAcaaggttacacacacacacacacacacacacacacacacacacacacaCACCGGTAAGTATTCACAGAATTCTCTTCCGCCAGCAACGGAAAGAAAATGAACAAGTCTCTGTAGAAAAGGGGAaatggaggggagggggggtcgCAGTCCATGAAAAGATAAAAaggaaggagaagaaggagggaTCTGTGTGTATAAATTGTCCCCGGTAattctgtgtgtgcgtttggtgtgtgtgttgcaggcaCAGCTTTACTGCTCCTTGTTCACTGCTCTTGGGTACTGTTTGGGGCGGggggctgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgtgtgtgtgtgtgtgcgtgtgtatccgCATTCAGTCGTTGTCCTCGTCATCGTCCTCGCTCTCCTCGATACCGTCGCTGTCCTCCtgctcctcgtcctcctcctccgtgTCTGGGATGTCCCACTGTGGGTGGTTGTCCAGCATGGCTTTGGCCTCGTGGACCTCCAGCTTGAGTGGTTTGATCTGGTCCAGTCCCAGGTAGGAATCAGAACGAAGGATGACAGAATATTGGTAATTGCCTGTTTTGGAGGGGGCTGGAAACTTCAGCTCCACCTGgggaacaacacacacaaacagctgtcAAAAATCTAATCACACGAGCACTCC
>TU250540
tttttatttgaaatgattttaaatacaaataatatactTTTCCATTTACAATGACAGTTCCTTTGTAAACAAAAGTGGCAGATAGATAGTCATTATTGGGTAGTTTGTCCAAACTGAGGCGGCCTGCCGGCCAGTCGCCTGGACAAGGTCTGTCATGGGAGAGATGGTGTCGCATTTAACCtcactgcagttttttttttttttttccccacacagCGTCAATCACTGATGCTACATTCTATTGCAGAGCGATCAATACTCAAGAGTACAATATAACCTGTTAACATACACCTGCTTTGAACACAATTACGGGAGAGTAGTGGCGTgcatgtgagtttgtgtgtatgtggtgtcaGGAGAGTGTGTCCAGAAATATTCATACCTTTATCTCTCCCACACTAACATGACACACAAGTATATACGGCAAAAGAAAACTTGTAACTGTTGAAAGCAGATATTCATGGTAAAAGATTAGTCATTTCTTTTAAACACTGTAAAGTCATCAACATACAGGAAGAGCCCATAGAGCTAAACAAGGAAGctctgatttctttctttttttgcactCGTGAGTCTAACGCATGTAAAAAACCAAGGTTAGATTggaacaaaacaagacaatgTGTTGCATGTTATAACTAGAGCTTAAGTGAGATGAAACAACTCATTTTGAATGAAAGGGGGTTCTTTTGGCTGGCCAGAACTGTTCTGTAttccacagacagacaaaccttTCCTTCTGAAATGGCAGTTGCACTAACAAAACTGAGCTTGTTCCGCTTTAATGAACAAAGAGAAAATGTGCTGGACAGAATATGCTTAGTCTTACACGAAAAGTTCCTTTTGACAGGTTCTTGTTAGCAACACTTTCATCCAGCTCATGAGTGCTGTGCGTGTCAGGGACCTCATACTCCAATCCCTTTAACACAGGGCCGCTCACATCACATCACGTACGATTGCTAATCCTCTTCCAGCGGGCAAAACTTCTTATTAGAGGCTTTGTCGTAGCAAGATCAGTGATATGTATACCAAGACTGGTGGAGCTAGAGTTTACTATgaagaaacaaaaacacttacaaaacacaaaagaagtttttttctgctttcccAAGAACCTCTGGCGCATAGCACCCAAGGACTTGTATGTGGTGGTATTTCAGTTGTATTCATAAGGCCTTTTTGGACAATGAGTATACACTGGAATGTGCTACAAttgtaaaaggaaaaaaaggatgAAGAGAAAGGAAGTCACTTCACTGGAAAGCCACAAGTATGTATCAGTATCTGAGCCCCTTAAAAAGACTGAAAACTCACAACCTGAATGTAGTATATGGACAAGAAGAGTACTCAATAATTCAAACAAATCTTAACACTGCAAGTTTTGCCATTCCCCATTATACTTGAGGTCAATTCATTTCAAGAGCCACGTGCTTTCAACCTTTTCAAACAGTTTGGCGTGGATCTCAGGGGCAGAACAGGCATCACTAACAGAACTGACTGGAGATCAGTGTCTATTGGTAGTCGTCTCCTTAAACATACAGTGAGTATAAGTACATACAAGTGACTGGCTGGTTTTGacagcgaaaaaaaaaaagaatgaaatgtGAAGAGACTCAACTGTGCCCCCCGTGCTCTGAAAGGAGCAAACGTCCCAATGGTTGACGTGATCCGCGACGAAAAGGGCTAAGGCTCTTCTGCAGTTTTAAGTGTACATTAGAAAGTATCATTTGCGTGGAAAACATCAGTGCCGAGTGATTTTTAAAATTAGGAGCAAGAGCGAGGTCATGATTTCCATATGGAGGTCatgtatttttgtaaattttgcAAACGGAATTAGTTGTTCTAcatccccctctccccctcaagaaaagaagaaaaaaacaaccagaTAATAGGTCCTTCAGTCCACAGTGTGTCAATCGTTCATACCTGTACAAACACATAcaaggttacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaGGTAAGTATTCACAGAATTCTCTTCCGCCAGCAACGGAAAGAAAATGAACAAGTCTCTGTAGAAAAGGGGAaatggaggggagggggggtcgCAGTCCATGAAAAGATAAAAaggaaggagaagaaggagggaTCTGTGTGTATAAATTGTCCCCGGTAattctgtgtgtgcgtttggtgtgtgtgttgcaggcaCAGCTTTACTGCTCCTTGTTCACTGCTCTTGGGTACTGTTTGGGGCGGggggctgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgtgtgtgtgtgtgtgcgtgtgtatccgCATTCAGTCGTTGTCCTCGTCATCGTCCTCGCTCTCCTCGATACCGTCGCTGTCCTCCtgctcctcgtcctcctcctccgtgTCTGGGATGTCCCACTGTGGGTGGTTGTCCAGCATGGCTTTGGCCTCGTGGACCTCCAGCTGGGAAATCACAAGATGTATACGTATAAGCGCATGGAACTCCTACGTTTGGACATTTAACACAGGCCGGTACTAACTCTCTAGTCGTT
>TU250541
acacacacacacacgCACCGGTAAGTATTCACAGAATTCTCTTCCGCCAGCAACGGAAAGAAAATGAACAAGTCTCTGTAGAAAAGGGGAaatggaggggagggggggtcgCAGTCCATGAAAAGATAAAAaggaaggagaagaaggagggaTCTGTGTGTATAAATTGTCCCCGGTAattctgtgtgtgcgtttggtgtgtgtgttgcaggcaCAGCTTTACTGCTCCTTGTTCACTGCTCTTGGGTACTGTTTGGGGCGGggggctgagtgtgtgtgtgtgtcagtgtgtgtgtgtgtgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250533 True 2620 lncRNA 0.43 3 17288851 17292275
TU250540 False 2572 lncRNA 0.43 2 17288851 17291556
TU250541 False 304 lncRNA 0.50 3 17281115 17299420

Neighbor

gene id symbol gene type direction distance location
nbas nbas coding upstream 146699 16965466 ~ 17134416 (+)
fam228a NA coding upstream 400780 16876319 ~ 16880335 (+)
gnpat2 gnpat coding upstream 408007 16858208 ~ 16873108 (+)
lpin1b lpin1,LOC104949544 coding upstream 424502 16837534 ~ 16856613 (+)
wdr26b wdr26,LOC104925620,LOC103363787 coding upstream 517671 16746173 ~ 16763444 (+)
ppp1r14c ppp1r14c coding downstream 13054 17312474 ~ 17331367 (+)
mtfr2 NA coding downstream 78762 17378182 ~ 17391719 (+)
LOC120546616 pde7b,LOC102780239 coding downstream 108354 17407774 ~ 17430002 (+)
hbs1l hbs1l coding downstream 180778 17480198 ~ 17504874 (+)
aldh8a1 aldh8a1 coding downstream 207534 17506954 ~ 17515583 (+)
G184948 NA non-coding upstream 324251 16933696 ~ 16956864 (+)
G184851 naga,LOC104944830 non-coding upstream 554723 16724877 ~ 16726392 (+)
G184796 NA non-coding upstream 670735 16595940 ~ 16610380 (+)
LOC120546561 NA non-coding upstream 764782 16493194 ~ 16516333 (+)
G184633 LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636 non-coding upstream 867614 16411676 ~ 16413501 (+)
G185022 NA non-coding downstream 94114 17393534 ~ 17397048 (+)
LOC120546618 NA non-coding downstream 130600 17430020 ~ 17447803 (+)
G185015 NA non-coding downstream 139269 17438689 ~ 17440600 (+)
LOC120546214 NA non-coding downstream 150110 17449530 ~ 17453062 (+)
G185067 NA non-coding downstream 169132 17468552 ~ 17469575 (+)
G184859 NA other upstream 447801 16825694 ~ 16833314 (+)
si:ch211-57i17.1 LOC103363786 other upstream 501180 16765545 ~ 16779935 (+)
vegfab vegfa other upstream 595036 16671586 ~ 16686079 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other upstream 877038 16399438 ~ 16404077 (+)
cenpw NA other upstream 899259 16379479 ~ 16381856 (+)
map7b map7,LOC107374525 other downstream 42417 17341837 ~ 17375059 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other downstream 369752 17669172 ~ 17686398 (+)
LOC120546940 NA other downstream 374973 17674393 ~ 17693634 (+)
G185237 NA other downstream 617433 17916853 ~ 17917248 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other downstream 721536 18020956 ~ 18054926 (+)

Expression


Co-expression Network