G185022


Basic Information

Item Value
gene id G185022
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17393534 ~ 17397048 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250579
CTTTTATTCAGTGCAAGAGATGTTTGTCaaaacgcatacacacacaaccttcTAGTAATTAATCAAGAAGAACatgaattttattttacatttaatgtaGTTTAACTGCTACATTGATATGTAAACCACTGTTGTAATATAAAGTACGTAATTAATACATGTGCAATATTGTGTTTGCACAATAAAATAGTATTTATCGTATCGTATAGTAATTGTCAGACATGTAAGTGGGGTAAATGACTGAAAGATCTAAGCAACTATCTGATGGATTGTGTATGTATATGACGTTTACCAGAACACAACATACATGTTTTCTTGAAATCCTTGTACAAAACGTTTAGACTTGGCCTCCTCTATTGTTGCTCTGCTTTGGTCCACTCTCTCAACTGAGAGATGGTTAGTTAGTAAGTAGCATGTCTACTAGAGATGTAAGATCCTTGTACAAAACTTTGATTAGACTTTCCCTCTGTTCATGTGTGCTGTGGTCCACTGTCTCAGCTGAAAGACCGATAAGTCACTACTTAAAGTTTGGGATTCTGATTCATATGATCTAACTTTGTTCCCACCCTAGAGCAGGGGTGCAACTACCCAGCATCAGAGGGGTATGCAGCAAcaattttgtttatatatatatatatatatacacactcacctaaaggattattaggaacaccctactaataccgtgttttaCCCCCTTTTGCCCTCATAACCGCCTTAAttcttggtggcattgattcaacaagatgctggaagcattctttagaaatgttggcccatattgataggagagcatcttgcagttgatggggATTTtctgggatgcacatccagggcacgaagctcccgttccaccacatcccaaagatgttctattgggttgagatctggtgactgtggggggcattttagtagttaactcattgtcatgttcaagaaaccaatttgaaataattagagctttgtgacatggtgcattatcctgctggaagtagccatcagaggatggtacatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggctgtggcatttaaatgatgcccaatggtactaaggggcctaaagtgtgccaagaaaacatcccccacaccattacaccaccaccaccagcccgCTCAGTGGTAACCaggcatgacagatccatgttcccattctgtttacgccaaattctgactctaccatctgaatgtcttaacagaaatcgagactcataagaccaggcaacatttttacagtcttcaactgtccagttttggtgagcttgtgcatattgtagcctcattttcctatttttagtggagatgagtggtacccggtggggtcttctgctggtgtagcccatccgcctcaaggttgttcatgttgtggtttcacaaatgctttgctgcatacctcagtTGGGatcaagtggttatttgagtcaaagttgatcttctatcagctggaatcagtcggcccactctcctctgacctctagcatcaacaaggcattttcgcccagagGACTGTcacatactggatgtttttcctgttGCAgaacattctttgtaaaccgtagaaatggttgtgggtgaaaatcccagtaactgagccgattgtgaaatactcagaccagcctgtctggcaccaacaaccatgccacgctaaaagttgcttagatcacctttcgttcccattctgacattaagTTTGGAGTTCAGTAGATTGTAtagacctggacgacacccctaaatgcattgaagcagctgccgtgtgattggttgattagataattgcattaacgagaaatcttacaggtgttcctaataatcctttaggtgagtgtatatatatatttaatatttatttatttttcttcttgtcaTCTATTGTGCATGCTACCTTATATTTACCAGtttccagattcttgtcatttattgtacttgctaccttatatttaccagttttcagctcagcaacctcggttttgcatattctaagctagctgtaaacccccatttggctgctacattcccagtgttagcaAACGCTAGCTAGTCTAACAAGAATATTTGCAAGCCTCCAAGCACAGACGTCACACTTTAATCCTAGctgttgcctttcaccatccacttATTTAACTGCTGTCACATCCCTTGACATGTcatctccttttccctctttctttttctatttttagccccCGACAGCTGTTTTGCTTTATCCATCTTTTTCCATAGACGACTCACTACTCGTACCCGCTCCCTCTTCTATGTCAACATTCTATGATGGAATCTTATGAGACAGGGCGCCTACTCTAGCCTGTTAGTCCTCTAAAATGTTATATAACATTGAGGAAATTATTTAGAAACgcacaacagcagctacatatagaaaataccaaaaaaatcattaattttatttttgactGTGTGGGAAAAAGTAGAAGCCAATGTTGCAAATGAGTATTGGCAAGACTTGACCAATCAGATTTGACTAACTAGCCGGGGATCTTTTGATAATCTTTCTGAACCATTCATTATTTAATATTAGGTATTTTATGTTTCTGTCTTGTCACTGTGATGAATGTAGTTTTAAACAGGCAGTTAAAGGTCAACAATTAATCCATAGCAAATGTTGAGTATAAGTATTAAATTATGACCATGTATGCATCTCATTTGAGTGGTTTTTCCTCCATCAAATAAAGGCTCTTGGTAGGTAATATAAGTATGACACatttattattgtgttttgATATTAGTATCTTTACATGGAGTTTCACTGGTCTATGTGCCAGGTTAGTGAAGGTCCTGGGTTTAACTCAGTTATCCAGATCACACAGTAAACCTGTTGTGAGTACTTTGTTACCAGAGCAGCATTGTATATGCTGGATAGTCAAACCTAATGTGAGGTAACTGAAAGATTTAGTGTAGTTCATGGTTAATTTCAAAGCAATAGCTTGACAGTTTTTTGTGAATTtgcttattcacttttttttttgttagtgtAAAAAGGTTCTCCTCCTTACACAGGGGTATATtccagactatttcttggctgggaCCAGTAACATCCTGAAGTCTCAGTTGCCTGGAAATAGTAAGGGAGATACAATTCTGTATCTCTTTGTTTGGACAAGCAACAAGTGTTCGTGAATGCTCAAATGgcattaaaaaattaaatatatgaCCAGAAACAAAATATAGAGAACCAGCATATCAAAAAGCTTAGTTGCACTTTGCCAATTTTTATGGCTGTAGATGCCTCAAGTCATCCTCttcacctcctcttcctcct

Function

GO:

id name namespace
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250579 True 3316 lncRNA 0.39 2 17393534 17397048

Neighbor

gene id symbol gene type direction distance location
mtfr2 NA coding upstream 1815 17378182 ~ 17391719 (+)
ppp1r14c ppp1r14c coding upstream 62167 17312474 ~ 17331367 (+)
nbas nbas coding upstream 259118 16965466 ~ 17134416 (+)
fam228a NA coding upstream 513199 16876319 ~ 16880335 (+)
gnpat2 gnpat coding upstream 520426 16858208 ~ 16873108 (+)
LOC120546616 pde7b,LOC102780239 coding downstream 10726 17407774 ~ 17430002 (+)
hbs1l hbs1l coding downstream 83150 17480198 ~ 17504874 (+)
aldh8a1 aldh8a1 coding downstream 109906 17506954 ~ 17515583 (+)
sgk1 sgk1 coding downstream 163805 17560853 ~ 17596054 (+)
slc2a12 slc2a12 coding downstream 218281 17615329 ~ 17623112 (+)
G184995 NA non-coding upstream 94114 17281115 ~ 17299420 (+)
G184948 NA non-coding upstream 436670 16933696 ~ 16956864 (+)
G184851 naga,LOC104944830 non-coding upstream 667142 16724877 ~ 16726392 (+)
G184796 NA non-coding upstream 783154 16595940 ~ 16610380 (+)
LOC120546561 NA non-coding upstream 877201 16493194 ~ 16516333 (+)
LOC120546618 NA non-coding downstream 32972 17430020 ~ 17447803 (+)
G185015 NA non-coding downstream 41641 17438689 ~ 17440600 (+)
LOC120546214 NA non-coding downstream 52482 17449530 ~ 17453062 (+)
G185067 NA non-coding downstream 71504 17468552 ~ 17469575 (+)
G185103 NA non-coding downstream 138806 17535854 ~ 17548289 (+)
map7b map7,LOC107374525 other upstream 18475 17341837 ~ 17375059 (+)
G184996 sec63 other upstream 97833 17293654 ~ 17295701 (+)
G184859 NA other upstream 560220 16825694 ~ 16833314 (+)
si:ch211-57i17.1 LOC103363786 other upstream 613599 16765545 ~ 16779935 (+)
vegfab vegfa other upstream 707455 16671586 ~ 16686079 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other downstream 272124 17669172 ~ 17686398 (+)
LOC120546940 NA other downstream 277345 17674393 ~ 17693634 (+)
G185237 NA other downstream 519805 17916853 ~ 17917248 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other downstream 623908 18020956 ~ 18054926 (+)
znf513a znf513,LOC102795572 other downstream 730083 18127131 ~ 18140260 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G80601 NA non-coding NC_047599.1 CM018545.1 10971311 ~ 10971971 (-)