G185134


Basic Information

Item Value
gene id G185134
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17633119 ~ 17667720 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250737
gtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttggagTGTGACAGGATGCTGTCCCAGACATGCTAGTGGCACTGCAGTTTACCACAAAGCAGATGAGACCAAATGGTATGAATCCTAAAAGATATGAGGGATAGACACATACCTAATATCAATGCCAGCATTCATGTTAAGTGTGTAGTCACGGTCATCAAATTAAACAAACATTGTTCTTGTGTTATTCCACTGCCAAACTAGTTTAAAGGACAGGGTGTCcgttattttctctttttgtcttaTTGCCTTCAAAtcaaataataagaaaaaaaacaacaatgaaaacaacTTTGTACATTCTGACTTCCCTACCCTGTCTGTGCCACTCAGCCCTGAGCCCATTCTTTTTTACAGAGT

Function

GO:

id name namespace
GO:0050877 nervous system process biological_process
GO:0050953 sensory perception of light stimulus biological_process
GO:0007600 sensory perception biological_process
GO:0007601 visual perception biological_process

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU250737 True 473 lncRNA 0.42 2 17633119 17667720

Neighbor

gene id symbol gene type direction distance location
slc2a12 slc2a12 coding upstream 10007 17615329 ~ 17623112 (+)
sgk1 sgk1 coding upstream 37065 17560853 ~ 17596054 (+)
aldh8a1 aldh8a1 coding upstream 117536 17506954 ~ 17515583 (+)
hbs1l hbs1l coding upstream 128245 17480198 ~ 17504874 (+)
LOC120546616 pde7b,LOC102780239 coding upstream 203117 17407774 ~ 17430002 (+)
LOC120546414 NA coding downstream 3793 17671513 ~ 17686499 (+)
eya4 eya4 coding downstream 42079 17709799 ~ 17758414 (+)
lca5 LOC104965141 coding downstream 124133 17791853 ~ 17799948 (+)
fam167ab fam167a,LOC102799533 coding downstream 132370 17800090 ~ 17808692 (+)
mtmr9 mtmr9 coding downstream 220921 17888641 ~ 17904513 (+)
G185112 NA non-coding upstream 79210 17553442 ~ 17553909 (+)
G185107 NA non-coding upstream 82014 17550558 ~ 17551105 (+)
G185103 NA non-coding upstream 84830 17535854 ~ 17548289 (+)
G185067 NA non-coding upstream 163544 17468552 ~ 17469575 (+)
LOC120546214 NA non-coding upstream 180057 17449530 ~ 17453062 (+)
LOC120546942 NA non-coding downstream 1446 17669166 ~ 17671477 (+)
LOC120546941 NA non-coding downstream 18976 17686696 ~ 17688280 (+)
G185155 rps12 non-coding downstream 92956 17760676 ~ 17763736 (+)
G185156 NA non-coding downstream 96249 17763969 ~ 17764792 (+)
G185254 NA non-coding downstream 389691 18057411 ~ 18059367 (+)
map7b map7,LOC107374525 other upstream 258060 17341837 ~ 17375059 (+)
G184996 sec63 other upstream 337418 17293654 ~ 17295701 (+)
G184859 NA other upstream 799805 16825694 ~ 16833314 (+)
si:ch211-57i17.1 LOC103363786 other upstream 853184 16765545 ~ 16779935 (+)
vegfab vegfa other upstream 947040 16671586 ~ 16686079 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other downstream 1452 17669172 ~ 17686398 (+)
LOC120546940 NA other downstream 6673 17674393 ~ 17693634 (+)
G185237 NA other downstream 249133 17916853 ~ 17917248 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other downstream 353236 18020956 ~ 18054926 (+)
znf513a znf513,LOC102795572 other downstream 459411 18127131 ~ 18140260 (+)

Expression


Co-expression Network