G185155 (rps12)


Basic Information

Item Value
gene id G185155
gene name rps12
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17760676 ~ 17763736 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250773
CCCTTTAGTGGCACTTTTTATTGCTGATGTTTACCAccatttactgtacagacaaCACATTTTAAGTTTTGTGAGCAAGCAGAGTACAGCAACACATCTTAACAGACATTTTATAGTGACTGCCAGTTTGATTAGTTGACTTGCTTGTTTTCAGTAAAATAtccaaagaggaaaaaaaacattcagacaACTGCTCCATTTCcactttttattgacattttatttcttgCTTTTGAAGTATTCCTCGATCACATCCTTTGCCTGAGACTCCTTGCCATAGTCCTGACAACGACACAGCTGCAGCCCACAACCTTGCGGGGTTTGCCCTCACGGTCGATCTTGCACAGACCGACCCACTCGCCGAGCTTCTTGTTGTCATCAACCTATCAGGTTGATCTGATGCTCAGCACAGAGGGCCTCCACCAGCTTGACGTAGGTGGGCTCATCACAGTTGCCTGCAAGGGCGCAGAGATGGGCTTGACGCCTGCAAAAGAACACCGAATTAACTCGCAGTAAGGGCTCATTCAACATTTTGGGCATTTCAAAATTTGACGGCACATCTCAGACAGAAATTGGGTAACAATGGCAGGCTTCCACATAAGAGTTCAGTAGAGGGAGCCACAATATCATCAGCGATACACCTCCTAAAGGACAAATCAAAATATTGATGAggtaaaaattaaaaacatactTGTCCAGGGCCTTAGCAGCCTCACGGATACCACGGGCGAGGCCATCGTGGATGAGAGCGGTCTTAAGCACTTCAGGGAGAGCAGTGTTGACATCCATCACACCTCCAGCAGCGACGCTATCAAAAACAGGCTTGCAAGTTTTTATGAAGTTTTACCAAAATGGGCATGACAAGTTAGTGGATTACAGTAGAGCTTCCAGGATGTCAGACTGAGGATCTCACTCATTGTTGAGTGAAGGGGTATCCGACAAAAGAAAGTAAAGTCATCACACACCAGAGAGCTCTGTTAAACAGATTGCATGCCTCAGAACAGCTAACCTTTCAAGATCAGTGGGATGTCAAATCTAGCATCAGGTTAAGGAAGATGTtaagttcattcattcatttaaactgCGTGCATTATCAAATTAGTGAATTGGTTTCTCAATTTGCTTGTGTTGTGTTTAGCACACAGCACATAAACTGACATCTGTCCAACTGGTGTGACATTTAACATTTACCTTAATTAATCAAAATTGCATGTGCTATTACACAATAGTGCTTTGAGCTCTTTCAGCTAAAACGTTAGTACTTCTAAATTCAGGCTAACAGTCACAGCTTCAAAGTGGGAACCAGTTTTGCTACGTTTCATAGAACATTATTGCAGCCACTGACTTTGTTCtagtttaaattataaaaagcaAGATCAGACACTCAACTTTCTTATGAGTTTGAAATACGTCCCTACACTTGATAACTGCGTATGTAGCTAGCACAGTATTTAAGTGTCCCCTTGCCCGGTTTTACGTTACATGCAACTCTGCTAACAttaagctagcgttagctcatGCAAAAGAACAGTCTACACCTAACGTTAGTCGCCGAACCAGTCATTGTACGAAACAGATACCCATAATAATCtaaaattacaacactgccATCACCACTTTTCACAAGAAATCAGCTCCCATGTGTTTGTTAGATATTCCGATTTTCACTGTGTGGGCTAGCAGCAAATAAAAGCGTCATGCTCACCCTTCCTCGGCCATTGTTGATTAAAGATGGATGGTAGGCTTAAAAGTTCtgcaataaagaacatatatgaAAGAAGAGTAAATATACATCGCAAATAGCTCATAGTGATGAATGTATGTATTAAGATGTTTGAATAATCCTTTGGATTGTGCCTATAGCCGGAGAAACGTACCCTATCCTACTCTCGGG
>TU250774
CCCTTTAGTGGCACTTTTTATTGCTGATGTTTACCAccatttactgtacagacaaCACATTTTAAGTTTTGTGAGCAAGCAGAGTACAGCAACACATCTTAACAGACATTTTATAGTGACTGCCAGTTTGATTAGTTGACTTGCTTGTTTTCAGTAAAATAtccaaagaggaaaaaaaacattcagacaACTGCTCCATTTCcactttttattgacattttatttcttgCTTTTGAAGTATTCCTCGATCACATCCTTTGCCTGAGACTCCTTGCCATAGTCCTGTAGacagaaatagtttgacatgaGCAGGTTAGAGACTTCACAAAGCTCTAAATTACAGCCCAAGCAAGATTACTGGCCAATTAAGCAGTGTCAGTGTTATGTTAACCAAAACAAAATAGGACATGTCagctagtgatggtcaaatgaagctttgcgaaccactttactttctgagctcactagatggtgctctgttcaaagaaaaaaaaggttaaaggaatggcaattcagtgtattTTCAACCTTTTGTTGAACAGatagcgccatctagtgagctcagaaaataaagtatTTCACTAAGCTTAATTTGACCATCACTAATGTcagcacacacagaaataaaccAACCCAAAATACCATTTTAATACCGGGCCAATAAAAATCATGGAAATATTCTTTTGTGCATCATCTTACACCTTTTTCCAAAATTCCAACTCTTTGGgaacaaaacataaaattgaaacaaatatagCCAGACAGAGGAGTTTGAAAGATTACAGTAATGACCCATCAATCATGGTGCTTTCTGTCATGTGTTACTATTTGTAGCCATTCTTAGGGACCCCAGACATCACAGGTAGACGACGGGGCTCGTACCCTGGCTGTCATCTAGCCAAGAATTATCTACAACAGTTGCATGGCACGAGGCACAGCAACTGCACTTGACTGGCAGATCTAGTCTCAACAGCAATGCGTTTCATCAAAATATTATTGAAGGCATCTTCGAAAACCTTGCAAAAGATGATTTACCTTGACAACGACACAGCTGCAGCCCACAACCTTGCGGGGTTTGCCCTCACGGTCGATCTTGCACAGACCGACCCACTCGCCGAGCTTCTTGTTGTCATCAACTTTATCAGGTTGATCTGATGCTCAGCACAGAGGGCCTCCACCAGCTTGACGTAGGTGGGCTCATCACAGTTGCCTGCAAGGGCGCAGAGATGGGCTTGACGCCTGCAAAAGAACACCGAATTAACTCGCAGTAAGGGCTCATTCAACATTTTGGGCATTTCAAAATTTGACGGCACATCTCAGACAGAAATTGGGTAACAATGGCAGGCTTCCACATAAGAGTTCAGTAGAGGGAGCCACAATATCATCAGCGATACACCTCCTAAAGGACAAATCAAAATATTGATGAggtaaaaattaaaaacatactTGTCCAGGGCCTTAGCAGCCTCACGGATACCACGGGCGAGGCCATCGTGGATGAGAGCGGTCTTAAGCACTTCAGGGAGAGCAGTGTTGACATCCATCACACCTCCAGCAGCGACGCTATCAAAAACAGGCTTGCAAGTTTTTATGAAGTTTTACCAAAATGGGCATGACAAGTTAGTGGATTACAGTAGAGCTTCCAGGATGTCAGACTGAGGATCTCACTCATTGTTGAGTGAAGGGGTATCCGACAAAAGAAAGTAAAGTCATCACACACCAGAGAGCTCTGTTAAACAGATTGCATGCCTCAGAACAGCTAACCTTTCAAGATCAGTGGGATGTCAAATCTAGCATCAGGTTAAGGAAGATGTtaagttcattcattcatttaaactgCGTGCATTATCAAATTAGTGAATTGGTTTCTCAATTTGCTTGTGTTGTGTTTAGCACACAGCACATAAACTGACATCTGTCCAACTGGTGTGACATTTAACATTTACCTTAATTAATCAAAATTGCATGTGCTATTACACAATAGTGCTTTGAGCTCTTTCAGCTAAAACGTTAGTACTTCTAAATTCAGGCTAACAGTCACAGCTTCAAAGTGGGAACCAGTTTTGCTACGTTTCATAGAACATTATTGCAGCCACTGACTTTGTTCtagtttaaattataaaaagcaAGATCAGACACTCAACTTTCTTATGAGTTTGAAATACGTCCCTACACTTGATAACTGCGTATGTAGCTAGCACAGTATTTAAGTGTCCCCTTGCCCGGTTTTACGTTACATGCAACTCTGCTAACAttaagctagcgttagctcatGCAAAAGAACAGTCTACACCTAACGTTAGTCGCCGAACCAGTCATTGTACGAAACAGATACCCATAATAATCtaaaattacaacactgccATCACCACTTTTCACAAGAAATCAGCTCCCATGTGTTTGTTAGATATTCCGATTTTCACTGTGTGGGCTAGCAGCAAATAAAAGCGTCATGCTCACCCTTCCTCGGCCATTGTTGATTAAAGATGGATGGTAGGCTTAAAAGTTCtgcaataaagaacatatatgaAAGAAGAGTAAATATACATCGCAAATAGCTCATAGTGATGAATGTATGTATTAAGATGTTTGAATAATCCTTTGGATTGTGCCTATAGCCGGAGAAACGTACCCTATCCTACTCTCGGG
>TU250775
CCCTTTAGTGGCACTTTTTATTGCTGATGTTTACCAccatttactgtacagacaaCACATTTTAAGTTTTGTGAGCAAGCAGAGTACAGCAACACATCTTAACAGACATTTTATAGTGACTGCCAGTTTGATTAGTTGACTTGCTTGTTTTCAGTAAAATAtccaaagaggaaaaaaaacattcagacaACTGCTCCATTTCcactttttattgacattttatttcttgCTTTTGAAGTATTCCTCGATCACATCCTTTGCCTGAGACTCCTTGCCATAGTCCTTGACAACGACACAGCTGCAGCCCACAACCTTGCGGGGTTTGCCCTCACGGTCGATCTTGCACAGACCGACCCACTCGCCGAGCTTCTTGTTGTCATCAACCTTTATCAGGTTGATCTGATGCTCAGCACAGAGGGCCTCCACCAGCTTGACGTAGGTGGGCTCATCACAGTTGCCTGCAAGGGCGCAGAGATGGGCTTGACGCtTGTCCAGGGCCTTAGCAGCCTCACGGATACCACGGGCGAGGCCATCGTGGATGAGAGCGGTCTTAAGCACTTCAGGGAGAGCAGTGTTGACATCCATCACACCTCCAGCAGCGACGCCTTCCTCGGCCATTGTTGATTAAAGATGGATGGTAGGCTTAAAAGTTCCTATCCTACTCTCGGG
>TU250776
CCCTTTAGTGGCACTTTTTATTGCTGATGTTTACCAccatttactgtacagacaaCACATTTTAAGTTTTGTGAGCAAGCAGAGTACAGCAACACATCTTAACAGACATTTTATAGTGACTGCCAGTTTGATTAGTTGACTTGCTTGTTTTCAGTAAAATAtccaaagaggaaaaaaaacattcagacaACTGCTCCATTTCcactttttattgacattttatttcttgCTTTTGAAGTATTCCTCGATCACATCCTTTGCCTGAGACTCCTTGCCATAGTCCTGTAGacagaaatagtttgacatgaGCAGGTTAGAGACTTCACAAAGCTCTAAATTACAGCCCAAGCAAGATTACTGGCCAATTAAGCAGTGTCAGTGTTATGTTAACCAAAACAAAATAGGACATGTCagctagtgatggtcaaatgaagctttgcgaaccactttactttctgagctcactagatggtgctctgttcaaagaaaaaaaaggttaaaggaatggcaattcagtgtattTTCAACCTTTTGTTGAACAGatagcgccatctagtgagctcagaaaataaagtatTTCACTAAGCTTAATTTGACCATCACTAATGTcagcacacacagaaataaaccAACCCAAAATACCATTTTAATACCGGGCCAATAAAAATCATGGAAATATTCTTTTGTGCATCATCTTACACCTTTTTCCAAAATTCCAACTCTTTGGgaacaaaacataaaattgaaacaaatatagCCAGACAGAGGAGTTTGAAAGATTACAGTAATGACCCATCAATCATGGTGCTTTCTGTCATGTGTTACTATTTGTAGCCATTCTTAGGGACCCCAGACATCACAGGTAGACGACGGGGCTCGTACCCTGGCTGTCATCTAGCCAAGAATTATCTACAACAGTTGCATGGCACGAGGCACAGCAACTGCACTTGACTGGCAGATCTAGTCTCAACAGCAATGCGTTTCATCAAAATATTATTGAAGGCATCTTCGAAAACCTTGCAAAAGATGATTTACCTTGACAACGACACAGCTGCAGCCCACAACCTTGCGGGGTTTGCCCTCACGGTCGATCTTGCACAGACCGACCCACTCGCCGAGCTTCTTGTTGTCATCAACCTTATCAGGTTGATCTGATGCTCAGCACAGAGGGCCTCCACCAGCTTGACGTAGGTGGGCTCATCACAGTTGCCTGCAAGGGCGCAGAGATGGGCTTGACGCCTGCAAAAGAACACCGAATTAACTCGCAGTAAGGGCTCATTCAACATTTTGGGCATTTCAAAATTTGACGGCACATCTCAGACAGAAATTGGGTAACAATGGCAGGCTTCCACATAAGAGTTCAGTAGAGGGAGCCACAATATCATCAGCGATACACCTCCTAAAGGACAAATCAAAATATTGATGAggtaaaaattaaaaacatactTGTCCAGGGCCTTAGCAGCCTCACGGATACCACGGGCGAGGCCATCGTGGATGAGAGCGGTCTTAAGCACTTCAGGGAGAGCAGTGTTGACATCCATCACACCTCCAGCAGCGACGCTATCAAAAACAGGCTTGCAAGTTTTTATGAAGTTTTACCAAAATGGGCATGACAAGTTAGTGGATTACAGTAGAGCTTCCAGGATGTCAGACTGAGGATCTCACTCATTGTTGAGTGAAGGGGTATCCGACAAAAGAAAGTAAAGTCATCACACACCAGAGAGCTCTGTTAAACAGATTGCATGCCTCAGAACAGCTAACCTTTCAAGATCAGTGGGATGTCAAATCTAGCATCAGGTTAAGGAAGATGTtaagttcattcattcatttaaactgCGTGCATTATCAAATTAGTGAATTGGTTTCTCAATTTGCTTGTGTTGTGTTTAGCACACAGCACATAAACTGACATCTGTCCAACTGGTGTGACATTTAACATTTACCTTAATTAATCAAAATTGCATGTGCTATTACACAATAGTGCTTTGAGCTCTTTCAGCTAAAACGTTAGTACTTCTAAATTCAGGCTAACAGTCACAGCTTCAAAGTGGGAACCAGTTTTGCTACGTTTCATAGAACATTATTGCAGCCACTGACTTTGTTCtagtttaaattataaaaagcaAGATCAGACACTCAACTTTCTTATGAGTTTGAAATACGTCCCTACACTTGATAACTGCGTATGTAGCTAGCACAGTATTTAAGTGTCCCCTTGCCCGGTTTTACGTTACATGCAACTCTGCTAACAttaagctagcgttagctcatGCAAAAGAACAGTCTACACCTAACGTTAGTCGCCGAACCAGTCATTGTACGAAACAGATACCCATAATAATCtaaaattacaacactgccATCACCACTTTTCACAAGAAATCAGCTCCCATGTGTTTGTTAGATATTCCGATTTTCACTGTGTGGGCTAGCAGCAAATAAAAGCGTCATGCTCACCCTTCCTCGGCCATTGTTGATTAAAGATGGATGGTAGGCTTAAAAGTTCtgcaataaagaacatatatgaAAGAAGAGTAAATATACATCGCAAATAGCTCATAGTGATGAATGTATGTATTAAGATGTTTGAATAATCCTTTGGATTGTGCCTATAGCCGGAGAAACGTACCCTATCCTACTCTCGGG

Function

symbol description
rps12 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human RPS12 (ribosomal protein S12).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250773 False 1894 lncRNA 0.42 3 17760676 17763736
TU250774 True 2649 lncRNA 0.41 2 17760676 17763736
TU250775 False 669 lncRNA 0.48 6 17760676 17763736
TU250776 False 2649 lncRNA 0.41 2 17760676 17763736

Neighbor

gene id symbol gene type direction distance location
eya4 eya4 coding upstream 2262 17709799 ~ 17758414 (+)
LOC120546414 NA coding upstream 74177 17671513 ~ 17686499 (+)
tcf21 tcf21,LOC102777283 coding upstream 106315 17652502 ~ 17654361 (+)
slc2a12 slc2a12 coding upstream 137564 17615329 ~ 17623112 (+)
sgk1 sgk1 coding upstream 164622 17560853 ~ 17596054 (+)
lca5 LOC104965141 coding downstream 28117 17791853 ~ 17799948 (+)
fam167ab fam167a,LOC102799533 coding downstream 36354 17800090 ~ 17808692 (+)
mtmr9 mtmr9 coding downstream 124905 17888641 ~ 17904513 (+)
tdh LOC108242421,LOC106524872,LOC104962272,LOC104922441 coding downstream 143005 17906741 ~ 17913030 (+)
pinx1 LOC102299901 coding downstream 155842 17919578 ~ 17949445 (+)
LOC120546941 NA non-coding upstream 72396 17686696 ~ 17688280 (+)
LOC120546942 NA non-coding upstream 89199 17669166 ~ 17671477 (+)
G185134 NA non-coding upstream 92956 17633119 ~ 17667720 (+)
G185136 NA non-coding upstream 98863 17640961 ~ 17661813 (+)
LOC120546270 NA non-coding upstream 106315 17636952 ~ 17654361 (+)
G185156 NA non-coding downstream 233 17763969 ~ 17764792 (+)
G185254 NA non-coding downstream 293675 18057411 ~ 18059367 (+)
G185258 LOC104959833,LOC107082730,LOC103138645,LOC106923247,LOC106920026 non-coding downstream 339289 18103025 ~ 18104904 (+)
LOC120546825 NA non-coding downstream 392234 18155970 ~ 18164654 (+)
G185323 NA non-coding downstream 417396 18181132 ~ 18181983 (+)
LOC120546940 NA other upstream 67042 17674393 ~ 17693634 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other upstream 74278 17669172 ~ 17686398 (+)
map7b map7,LOC107374525 other upstream 385617 17341837 ~ 17375059 (+)
G184996 sec63 other upstream 464975 17293654 ~ 17295701 (+)
G184859 NA other upstream 927362 16825694 ~ 16833314 (+)
G185237 NA other downstream 153117 17916853 ~ 17917248 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other downstream 257220 18020956 ~ 18054926 (+)
znf513a znf513,LOC102795572 other downstream 363395 18127131 ~ 18140260 (+)
ylpm1 ylpm1 other downstream 834629 18598365 ~ 18635052 (+)
LOC120547227 LOC104932566,LOC103364615 other downstream 942120 18705856 ~ 18711994 (+)

Expression


Co-expression Network