G185414


Basic Information

Item Value
gene id G185414
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18636374 ~ 18640381 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU251126
AGGattacatgacgagtgcatagcctgcttatcagtccattcatcattaaagctgggcttttccacgtcaacttttcgcttcagcctctttgacagtgacatacctgacaacagcctctttctgcaagcattttccaccaatcaggatgctgcatactacaataatgtttctataatcacagactttaaccatcactcctcagtgaactgcctcctagtctgagatctttttctagttaaagagccagttatcattatggagtttccatgtttttttaggagtttgctcacactaatacatgttaaaaaaataaataaatgtagcattaattcagtaagaaagtgaaaatttctAACAAGAATAGGcttattaggtataaattcattttattttctttatttgaaagtccggccgccagagtgcttagaaaaattctgaaaaaattgtagttgatgatccctgctgtagactctctgtccagtcagagacatatattgtgtaatttatgttttcagttcaattaattaaatccaagtaaatggaacactcacaagatatcactctgtcccctttaaatctttcagaaaatgatttaagtgtattgaaatatattgaatcgtatcgttggctgaatatcgtgatatatatcgtatcgtgagctgaatatcgtgtatcgtgagattagtgtatcgctacagcccatatatatatatatatatatatatacacacacacacacacacacacacacacacactctgtataAACGGGCTTGATGAACAAGAGGCCTGGAGTGTTTTTGCATGCAAAGTAAAGCAGAATGTGCTAAAAAATGAATCAGTTGGGATAAACAATTATTTACATCTGTCTGGCTTCACTTGTTTAGCACCTGTGACATTTTTTAAGGCAGACTGTTATCACTGTGTATGGTTAAGTGAAGAGGATGAAAGTAAGAGTAAATGGTAACATGAACATTTTGtgatgtgtgttttcatgtaaaatgtcCACTCATGTTTAGAGAATGAGGACATGAGGATTCCCTACACCTTGGCAAATTTCACTGTGAAACATATGCAAATGTATCGCATAGTTTTACACCTCTGTGGGTTCTCcttgttttagtttagttttttacattaaaatctaaaaataagcAATTATACAAGAAGGTGCCAATTTCAAATCAgactactttatttttttgtgacaaGTGTGTGCTTGTTGCAGCATTTTGTTGTGGTTTGAATTGTTTGAGTGTCAGAAGGTGCAGTGTACATGCAAGTCCATGGATGTAGGACTGAAAAGGACCACCTTActctgtatttttgttttaaccTTTTTTAAGCTAAATAGTTAATTTGACATCATGGTGGACTACGGGGTAATGTCATGAATACTGGGAACATTGGGGTGCAGGTGGTTAAAGCCTGGTTTCTTCATTGAAAAGTTGATTACAGTGGCTTTTCATGACAATAGTATTTTAATTTTGGTCTCAtttaaattcctttttttttaacttaacatTTTCTGAACACATTTTACATACAAAGTCAAGATAAAATGTTAACTGTACCACATTCAGCTGATTGTTACTATATATGATCACTAATGCACATTATCAAAGCCCACAATTACGTAACATAATGTTCATTTAAGCAAGAAAGAACGATGCAAAttaagtgtttgtttttctgtctcacGGGTCAGTTAAACTTTGAAACAATCTGAAAACTGGCTGCAAATATATGTGGACAATCTACAAGTGAAAAAGGATGGATGTATACAAAATGTCTGCTCTTActgctttttttcaataatttttgATACAGTGGCACACTTAAAGCTGGGCTAGGCAgttttctttgtgtcattggGCATCGATCTAATCTATAATAACCTTatagcatattgtaattcaagtggacTGAGGGAAAACGTCttcctcttggctctgttttcgggctttagaaaatctagcccGTGACGGGAGACTTAGGCCAATCACAGGTTGGCTGTTCTGCAGATGCATGTCTTGGATGGAGAACTGTACACAGTGTATATGAAAGTTTCTCAGTGGCGCATGAAGCCAAAAAAGTTTGACTTCCATGTATTAAATCTTCCACATCTCTGGGGCCCATAGAGAAAGCGCACTTACGTTTCCTTTAACCATACCTCCCATCTGCTCAGTCTCGGACTCATTTACTAGACGGAGACGGAGGAAGGAAAAGAACTGTATTCGGCTATTAGTTAATTTTGCAACTTTTAGaacattaagggccctattttaacgatctaagtgcatggcgtgaagcgcatggcgcaggtgcatttagggcgtgtccaaatccatttgctagtttaacggcggaaaaaagggtccgtgcgccggtcacatggttcaaaagggttgtacttagtgtcttcattaattcataggtgtgttttgggcgtaacatgcaataaaccaatcagagtgttatctcccattccctttaaaagccaggcgcgtttgtaccttggcacattgctattatgatggcagatTTGTACCGTaatatttgtaatcttttgcatgtttgtgtgttgctgcgcttccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtacaagcaTAGGGTGGCCGCGCTGTGCacaagcctaggcgcattttactaatttgctgttaaaataacaatgaaatgctgcgctattggctttagaccaggtttttgttggtcaatggtgcaatcacttcccgctgcctcaaaatagcaatacgccaagaattcacctgaacacacctccctgtaagaccagcacgcccatgggcgcaaagatggacGCAGgagcatttgctatttaaacaacgtgggcgctgtgtcggtcttaaactagcgaagacacttgcgtcgggcgcaagatagggcccaatgaTTTAAATAAGGGCTAATTTAAAGATCGTACTGGGAAGTGATGAACCTCAAACCAATTGTCCGCTTATTTACAGAAGCTCACAGCTACGGTTAGAAGAAATCTAAACTATTAGCAacattttctctccatctctccaatAGTTTAGTCTTCTGCTTACCGTAGCCAAAGGCTCACGGCTGCGGCTAAACCTTGTGGCTAGGGTTTGCATGAGGCTAAACAGTTAGCAACATTTTCTGCACTTTCAAGCGCTTGTATATGCACATGCTTGTctggtgggaggggcttagcACAGAGtggagagctgcaggaggaTGGCTGTATTTTCAAATTCTGGCGTGTGCTTTGGCTTTTCCAGAAAACTGCCTACCCAAGCTTTAATATGTACTAGAGTTTGCCTGGTTGACCCTTGTTGTCATTCATTGTTGAGAGCAAGGTCATTAATAAGTAAATGTCACACAGAAGTGTAGTTGTGTTGCTGTTCAGTTTTCTAATGCCTATGTGCACACTGCATATTGGTATTTAAAGGAGCCAATTTCAGTCTCACGCAATGTGATTATCATGGTTAATATCTAAGCAGGTGTATTCAGTGTTTAagatacattttacatttacaaaccTTGCAGCTTTGTGAACGAAGAGTACAGAATTTTCACCCATGAGAAGTTTTCATCTGGATTATCAACGCTGTTACAGAAGTAACTGAAGACAAAACAAGGATCATCAATTATGACCGAACACTCAGAACATCTGATGAAGACCATGGTTGATTAGCCCGCGGACAGCCAGCCACCATGTGTCATTTAGaaagtggatggatggatttttatGGTAAgtatggaagagagacagaaacactgCCATTTTAAGAACAGAGTTTGTAAGGGGCGGGCGGGTTAGAGACATAATCTACATATACGCTAATTAAGTAATTTCCATTTTAAATATCCTGTACATAAATACAGAATGAAAATAATGAGCTCTGc
>TU251127
caagcaTAGGGTGGCCGCGCTGTGCacaagcctaggcgcattttactaatttgctgttaaaataacaatgaaatgctgcgctattggctttagaccaggtttttgttggtcaatggtgcaatcacttcccgctgcctcaaaatagcaatacgccaagaattcacctgaacacacctccctgtaagaccagcacgcccatgggcgcaaagatggacGCAGgagcatttgctatttaaacaacgtgggcgctgtgtcggtcttaaactagcgaagacacttgcgtcgggcgcaagatagggcccaatgaTTTAAATAAGGGCTAATTTAAAGATCGTACTGGGAAGTGATGAACCTCAAACCAATTGTCCGCTTATTTACAGAAGCTCACAGCTACGGTTAGAAGAAATCTAAACTATTAGCAacattttctctccatctctccaatAGTTTAGTCTTCTGCTTACCGTAGCCAAAGGCTCACGGCTGCGGCTAAACCTTGTGGCTAGGGTTTGCATGAGGCTAAACAGTTAGCAACATTTTCTGCACTTTCAAGCGCTTGTATATGCACATGCTTGTctggtgggaggggcttagcACAGAGtggagagctgcaggaggaTGGCTGTATTTTCAAATTCTGGCGTGTGCTTTGGCTTTTCCAGAAAACTGCCTACCCAAGCTTTAATATGTACTAGAGTTTGCCTGGTTGACCCTTGTTGTCATTCATTGTTGAGAGCAAGGTCATTAATAAGTAAATGTCACACAGAAGTGTAGTTGTGTTGCTGTTCAGTTTTCTAATGCCTATGTGCACACTGCATATTGGTATTTAAAGGAGCCAATTTCAGTCTCACGCAATGTGATTATCATGGTTAATATCTAAGCAGGTGTATTCAGTGTTTAagatacattttacatttacaaaccTTGCAGCTTTGTGAACGAAGAGTACAGAATTTTCACCCATGAGAAGTTTTCATCTGGATTATCAACGCTGTTACAGAAGTAACTGAAGACAAAACAAGGATCATCAATTATGACCGAACACTCAGAACATCTGATGAAGACCATGGTTGATTAGCCCGCGGACAGCCAGCCACCATGTGTCATTTAGaaagtggatggatggatttttatGGTAAgtatggaagagagacagaaacactgCCATTTTAAGAACAGAGTTTGTAAGGGGCGGGCGGGTTAGAGACATAATCTACATATACGCTAATTAAGTAATTTCCATTTTAAATATCCTGTACATAAATACAGAATGAAAATAATGAGCTCTGc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251126 True 4008 lncRNA 0.39 1 18636374 18640381
TU251127 False 1290 lncRNA 0.42 1 18639092 18640381

Neighbor

gene id symbol gene type direction distance location
LOC120546828 LOC103363571,LOC107377519,LOC101067486,LOC106919680 coding upstream 55251 18500991 ~ 18581123 (+)
flvcr2b LOC104964435,LOC107377514,LOC101468256,LOC103363569,LOC108242486,LOC100710273 coding upstream 194112 18419656 ~ 18442262 (+)
batf batf coding upstream 217214 18414012 ~ 18419160 (+)
zc3h14 zc3h14 coding upstream 227297 18402072 ~ 18409077 (+)
LOC120547097 LOC104922430,LOC103363566,LOC104964450 coding upstream 277461 18347236 ~ 18358913 (+)
LOC120547135 LOC104964429,LOC103372634 coding downstream 7920 18648301 ~ 18654514 (+)
fosab LOC104951064,LOC103372631,LOC100709203 coding downstream 55274 18695655 ~ 18698104 (+)
tmed10 tmed10 coding downstream 76642 18717023 ~ 18722986 (+)
eif2b2 eif2b2 coding downstream 92947 18733328 ~ 18737691 (+)
LOC120547336 LOC104951086,LOC103372628 coding downstream 114512 18754893 ~ 18760888 (+)
LOC120546827 NA non-coding upstream 172346 18443952 ~ 18464028 (+)
G185374 NA non-coding upstream 239203 18396866 ~ 18397171 (+)
G185361 NA non-coding upstream 321895 18314228 ~ 18314479 (+)
G185360 NA non-coding upstream 327639 18308335 ~ 18308735 (+)
G185359 NA non-coding upstream 330797 18305254 ~ 18305577 (+)
G185415 LOC106525279 non-coding downstream 3038 18643419 ~ 18645154 (+)
LOC120546607 NA non-coding downstream 26259 18666640 ~ 18690033 (+)
G185471 NA non-coding downstream 63584 18703965 ~ 18705234 (+)
G185495 daam1,LOC108240128 non-coding downstream 178703 18819084 ~ 18821146 (+)
G185589 NA non-coding downstream 374345 19014726 ~ 19019533 (+)
ylpm1 ylpm1 other upstream 1322 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 496114 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 581448 18020956 ~ 18054926 (+)
G185237 NA other upstream 719126 17916853 ~ 17917248 (+)
LOC120546940 NA other upstream 942740 17674393 ~ 17693634 (+)
LOC120547227 LOC104932566,LOC103364615 other downstream 65475 18705856 ~ 18711994 (+)
LOC120546624 prox1 other downstream 563773 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 714235 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 727339 19367720 ~ 19389223 (+)
nhsl1b nhsl1,LOC101470763 other downstream 789214 19429595 ~ 19541832 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G355348 NA non-coding CI01000146 null 1756606 ~ 1815443 (+)