G185471


Basic Information

Item Value
gene id G185471
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18703965 ~ 18705234 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU251198
CACTCAGTATGCAGATCTGCACCAACTTTGCGCCAGACTTGTCTGTAGCTTCTGAGAACGACAGTCCGTCCGGCGGGTGCGACGCAGATCCGGGACAGCTGCGCAGACCAGACACGCCACATGTCCGCCCGGCGAGTGCGGGCCGGATCCACGGGAGCTGCGCAGACCGGACGCGCCACAACTGAAATATGTCCGCCCAGCGGGTGTGGGCCAGACCGGACACGCCACAACTGAATTGAGTCCGCTCGGCGGGTGTGGGCCCGTTCTAATACATCATGATGTGGGCCAGATCCACGGGAGTTGCGCAGACCGGACGCGCTACAACTGAATTGAGTCTGCCCGGCGGGTCTGGGCCAGATCCACGGGAGTTGTGCAGACCGGACGCGCCACAACTGAATTGAGTCCGCCCGGCGGGTGTGGGCCAGATCCGCAGGAGCTGCGCAGACCGGACGCGCCACAACTAACGGAACGCTTTTTTCCTGCATAAACCCGCAACTCTATTTGAAATGCAGAGAGGAAGACTGCAGGCTGCACCGTCTTTGTGATTATTGGCTACGTCTTACAGGAGCAATGAGGAAGAATCGCATGTCTGACAAAGCCACGGACACGGAGATAAATCAATAGCCAGATCTGCCTTAAGACTGCGGGGGTGGACGCCGTGCCCGGTTTCACCCAACTAATAAGCAGTAAATATACCTACAGTAGGCGCAGTGTTCACATTAGGTTAGGCTActtggttttgtatttttttttgtaatttgaataaTTA

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU251198 True 769 lncRNA 0.56 2 18703965 18705234

Neighbor

gene id symbol gene type direction distance location
fosab LOC104951064,LOC103372631,LOC100709203 coding upstream 5861 18695655 ~ 18698104 (+)
LOC120547135 LOC104964429,LOC103372634 coding upstream 49451 18648301 ~ 18654514 (+)
LOC120546828 LOC103363571,LOC107377519,LOC101067486,LOC106919680 coding upstream 122842 18500991 ~ 18581123 (+)
flvcr2b LOC104964435,LOC107377514,LOC101468256,LOC103363569,LOC108242486,LOC100710273 coding upstream 261703 18419656 ~ 18442262 (+)
batf batf coding upstream 284805 18414012 ~ 18419160 (+)
tmed10 tmed10 coding downstream 11789 18717023 ~ 18722986 (+)
eif2b2 eif2b2 coding downstream 28094 18733328 ~ 18737691 (+)
LOC120547336 LOC104951086,LOC103372628 coding downstream 49659 18754893 ~ 18760888 (+)
LOC120546187 acss1,LOC100712210,LOC102211118,LOC102308435,LOC101486165,LOC103364973 coding downstream 56183 18761417 ~ 18779102 (+)
LOC120546186 kcnh5,LOC103364987 coding downstream 93023 18798257 ~ 18813714 (+)
LOC120546607 NA non-coding upstream 13932 18666640 ~ 18690033 (+)
G185415 LOC106525279 non-coding upstream 58811 18643419 ~ 18645154 (+)
G185414 NA non-coding upstream 63584 18636374 ~ 18640381 (+)
LOC120546827 NA non-coding upstream 239937 18443952 ~ 18464028 (+)
G185374 NA non-coding upstream 306794 18396866 ~ 18397171 (+)
G185495 daam1,LOC108240128 non-coding downstream 113850 18819084 ~ 18821146 (+)
G185589 NA non-coding downstream 309492 19014726 ~ 19019533 (+)
G185590 NA non-coding downstream 317462 19022696 ~ 19023030 (+)
G185591 kcnk2 non-coding downstream 319030 19024264 ~ 19024578 (+)
G185592 kcnk2 non-coding downstream 337990 19043224 ~ 19043548 (+)
ylpm1 ylpm1 other upstream 68913 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 563705 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 649039 18020956 ~ 18054926 (+)
G185237 NA other upstream 786717 17916853 ~ 17917248 (+)
LOC120546940 NA other upstream 1010331 17674393 ~ 17693634 (+)
LOC120547227 LOC104932566,LOC103364615 other downstream 622 18705856 ~ 18711994 (+)
LOC120546624 prox1 other downstream 498920 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 649382 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 662486 19367720 ~ 19389223 (+)
nhsl1b nhsl1,LOC101470763 other downstream 724361 19429595 ~ 19541832 (+)

Expression


Co-expression Network