G185495 (daam1,LOC108240128)


Basic Information

Item Value
gene id G185495
gene name daam1,LOC108240128
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18819084 ~ 18821146 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU251241
CCGTTTTCTCCCATTTATTATCATCAGGTCATTGTACAATGGAAGGCaatatttaaattataaaaagtccAATGGAGGTGTTTGACACTGGATGGATTCACACAGCTGAGGGGACAAATTAAAATCAAAAGAGTTCACGTCCACATGTGATGTTTTCTACAACAATGAAAACATCACGTGGATCACATAGTTTAaaatcaggtttttttttcttttgtttttgcagtGTAAATCCAGCCAGTGTacagaaaacatattttatctATTCAATAGAAACGTAAAGGAGGGCACTCCCTTCAGACAGGAAAAGCAAGTTTATTGCATCCACTGGGTATTGTTTTAATGGCATTTAGCATAgtaattatgactttatatgtgcatgtgtaaCAAGCACGCAAccgtatatatagatatatgtaatCTATGACACGAGTGTCCACACTTGTTGAGAAATTGCAGACTAGGCCCAGGCCTTAGAGAGTACCCACTCAACAATTAAAACAACAGTTAAGGCCAGCTCTTAACGGGAAAAAGTTCAAATAAAACATACAGTGATCAGATATATAAATGCTGCACGTCAATAATGATGAATAGAAAAGAAACTTCTTAGCTGCGTCGCTTGCCGTCAAAACCACGTCTGTCTAACAACGCAGTGTCTCAGTCCTGTGATGGTTCTGACTGCAGGAAAACAGCAGCGTTAAGAGGAAGTTCAGATACAGTCTTTCTCCAAAAAATTCTCTCTTGGACAACTGAAAGCAGCCCATCTCAATCTATGAAATCAGTCCGTACAAAATGGCCCCTTGTGTTTTTAATGGAATCCTCTTCCTGTTTGGATCGAGCATCAAGGCTGCACGTTTCACTCTGTGCATAGATTCTGACGTACAAAAACAGCAGAACGCTTCCTATCAAACAAGCGTGAGCATCTCTTAGACCTTGAAACTTTCCCCCAGCGGAGGAAACATCCTGCTCTtgcacaacttttttttatttaaacatttcatttGACCAAACTGATCCTCCAGTGGGAATGATCTGATTTATGTCTTTAGGAACAACCTTTGGCATCTGCTCCGTTTAACATCAAAATCTCAGGATGAAAGGTCTGAACGTGTTGTGTGGCTCTGCAGCGATGATGCAAGGCCGAGCTGGGTGGGAACGGAGGAGGGTGCAGAGGAATGTGCATGTCAGTTCGACCCAGAGGGAAGCTAATGATGAGCAGGAGGTGGGCGAGCCAGGCAAGAGTGATGACCTCAACCCCGCTTAGAAGTTGAGCTTCGTGACCGGTCGCTCTCTGCTCGCGTCGGTGGTCTGGCTGTTGATGCGCTTGCGGTTGCGTTTCATCTTGGACAAGTCCTTGTCGAAGACCTCGCCTGATCGCAGCGCTGACACCAAGTCGTCAAACTCGCCGCCGTCGTCCTCCCCGTTGGCCTTCGCTTTCCGGGCCTTTCGCTCCTTCTCCCTCTGCTCTTTCAGCTGAGCTTCCATTTTGGCCCtgcgctcctcctcctctttgcgTTTCCGAATGTTCTCGTTCTCCTGCTGAGCCTCAGCGAACGACTGCAGGAACTGGTCAAAGATGCCAAAGAACTCATCTGGCTGCATCTTACCGGCGTCCTCGCCGAAGTGCTTTACTGCC

Function

symbol description
daam1 Enables identical protein binding activity. Predicted to be involved in actin cytoskeleton organization. Located in several cellular components, including cytoskeleton; cytosol; and motile cilium.

NR:

description
PREDICTED: disheveled-associated activator of morphogenesis 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251241 True 1636 lncRNA 0.45 2 18819084 18821146

Neighbor

gene id symbol gene type direction distance location
LOC120546190 l3hypdh coding upstream 641 18814609 ~ 18818443 (+)
LOC120546186 kcnh5,LOC103364987 coding upstream 5370 18798257 ~ 18813714 (+)
LOC120546187 acss1,LOC100712210,LOC102211118,LOC102308435,LOC101486165,LOC103364973 coding upstream 39982 18761417 ~ 18779102 (+)
LOC120547336 LOC104951086,LOC103372628 coding upstream 58196 18754893 ~ 18760888 (+)
eif2b2 eif2b2 coding upstream 81393 18733328 ~ 18737691 (+)
trnae-cuc_27 NA coding downstream 111170 18932316 ~ 18932387 (+)
gata4 gata4,LOC102782453 coding downstream 127174 18948320 ~ 18958802 (+)
fdft1 fdft1 coding downstream 145060 18966206 ~ 18977451 (+)
ctsbb ctsb,LOC104947341 coding downstream 156684 18977830 ~ 18981178 (+)
LOC120546316 LOC104947340,LOC103364984,LOC107377588,LOC106510778 coding downstream 161031 18982177 ~ 18989774 (+)
G185471 NA non-coding upstream 113850 18703965 ~ 18705234 (+)
LOC120546607 NA non-coding upstream 129051 18666640 ~ 18690033 (+)
G185415 LOC106525279 non-coding upstream 173930 18643419 ~ 18645154 (+)
G185414 NA non-coding upstream 178703 18636374 ~ 18640381 (+)
LOC120546827 NA non-coding upstream 355056 18443952 ~ 18464028 (+)
G185589 NA non-coding downstream 193580 19014726 ~ 19019533 (+)
G185590 NA non-coding downstream 201550 19022696 ~ 19023030 (+)
G185591 kcnk2 non-coding downstream 203118 19024264 ~ 19024578 (+)
G185592 kcnk2 non-coding downstream 222078 19043224 ~ 19043548 (+)
G185593 NA non-coding downstream 224268 19045414 ~ 19046107 (+)
LOC120547227 LOC104932566,LOC103364615 other upstream 107090 18705856 ~ 18711994 (+)
ylpm1 ylpm1 other upstream 184032 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 678824 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 764158 18020956 ~ 18054926 (+)
G185237 NA other upstream 901836 17916853 ~ 17917248 (+)
LOC120546624 prox1 other downstream 383008 19204154 ~ 19237033 (+)
acbd3 acbd3,LOC102799892 other downstream 533470 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 546574 19367720 ~ 19389223 (+)
nhsl1b nhsl1,LOC101470763 other downstream 608449 19429595 ~ 19541832 (+)
zgc:193593 NA other downstream 751427 19572573 ~ 19620783 (+)

Expression


Co-expression Network