G186506


Basic Information

Item Value
gene id G186506
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 22535659 ~ 22537716 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU252644
GTTGTCATAATTTTTCATAATTTATTGTACATTGTCATTTCTTCCATTATACCCAATAAACAGTACAACATTTCCatttatacaaaatataaactATAAGGGGGAAATATAAATCTAACATCAAGCCTTCCCATATGGTTACACATACAGTCATTTCCTGGGTCTAACCCATGTATGAAGAGGGGAAAGGTGTAAATCAAACCCTCATTGTAAAAGACCACAACTCTTTAAAAATTACAAGGCAAAACTGACACAAGTGGTGTGCCAACTTATTTGCTACATACATCTCTTTGACATTTCTAATAAAAAGACTGAAGAGCCAAATTATGAAAGAACCCAACTAAATGTCATCTGGCTTACactttttgcattttaaatccCCTACTGTATGTGCCAAACTTAACTTAACAGACAAAAATCATTCTGATATTGATTGCCAGGTGCCACAAAAAGAACCTCTGTACACTCAAGTGGTCCACATTTCAATTAAGACATGAGACATGAGAACCACAGCCCTGAGCATCTCCAAAATGTGATGATGTAACTATGGAAACGCAAGCCAAAAGAGAAGCTGGGTGAACCGCCATTGCTTTCGATTCCATGCAAGGGGCTGGGGGGGGTTTGGTGATGATCTCCACCTGAAGGTTAAACCCCCTTTATTGAAAGAAATGTCTTgaattaaacacattttatcaTTACTTAAGGAGGACAAAGAAGGCTGTGGAGTCCATCCATGTTAGTCTTGTGGTCTCTGTGCAGTGTGATGAAGAGCAGAAGAGTAAGGTTGGACTGGGTGGGATGATGAGGGGTGAGGAGGAGTGTTGAGGCAGAGAAGAGGGGGGCTGTGGGGTCCAGGGCTTCAACAGTAGCGCTGCAGGAGAGAGGCTGCCATGACAACGGGGATCAGGAAGGAGACTGTGCCTGCGTGCAGTGAGACGCCTGCTCCGGCAGGGCTGGTAGTGTTGGCCGAACTGCTGTGGGTGTCTGTAGCCATGGTGGTGGTGTTGGGCTTGGAGGTGGAGTTCCTCCACGCTGTGGGGTTTGTGATGTTCTGGGAGACCACCTGTGTTGATAAACATATTGCGAACACAATCACTCCAAGTTGAACGATCGTCATTTTGgacattttcttttgtcttttttgatgTTTGCAGTAATTTGGCCAAGTGGAGGAGGCTGCCCGCAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252644 True 1188 lncRNA 0.44 2 22535659 22537716

Neighbor

gene id symbol gene type direction distance location
LOC120546366 LOC104963849 coding upstream 19968 22489046 ~ 22515691 (+)
LOC120546368 mrap2 coding upstream 50758 22481920 ~ 22484901 (+)
LOC120546233 sim1,LOC103374615 coding upstream 85595 22438721 ~ 22450064 (+)
LOC120546584 prep,LOC100698444,LOC102792678,LOC104927043 coding upstream 264912 22258597 ~ 22270747 (+)
LOC120546308 NA coding upstream 314514 22212510 ~ 22221145 (+)
LOC120547088 LOC104956167 coding downstream 3690 22541406 ~ 22553765 (+)
LOC120546968 LOC103362669 coding downstream 17144 22554860 ~ 22585207 (+)
LOC120547328 LOC104956169 coding downstream 50141 22587857 ~ 22589325 (+)
LOC120547327 LOC104956175 coding downstream 52184 22589900 ~ 22591276 (+)
pdia6 pdia6,LOC102796876 coding downstream 73311 22611027 ~ 22621105 (+)
G186452 NA non-coding upstream 240962 22294442 ~ 22294697 (+)
LOC120547080 NA non-coding upstream 701877 21832948 ~ 21833782 (+)
LOC120546760 NA non-coding upstream 789105 21745581 ~ 21746554 (+)
G186297 NA non-coding upstream 992878 21540588 ~ 21542781 (+)
G186220 NA non-coding upstream 1060355 21474552 ~ 21475304 (+)
G186578 rhob,LOC104947257 non-coding downstream 179254 22716970 ~ 22719893 (+)
G186622 NA non-coding downstream 262019 22799735 ~ 22800058 (+)
G186641 NA non-coding downstream 309156 22846872 ~ 22847674 (+)
G186697 NA non-coding downstream 479241 23016957 ~ 23018800 (+)
G186725 NA non-coding downstream 605714 23143430 ~ 23143648 (+)
lin28b lin28b other upstream 234074 22280967 ~ 22301585 (+)
G186394 mycn,LOC108233328 other upstream 470070 21985779 ~ 22065589 (+)
erh erh,LOC100699790,LOC101174968 other upstream 588659 21944743 ~ 21947000 (+)
gtf2h5 gtf2h5 other upstream 1363020 21170948 ~ 21172639 (+)
kif25 LOC104961976,LOC100703631 other upstream 2675442 19852643 ~ 19860217 (+)
kcns3b kcns3,LOC103372653 other downstream 270163 22807879 ~ 22810520 (+)
si:ch211-22i13.2 NA other downstream 424317 22962033 ~ 22966010 (+)
dtl dtl other downstream 550104 23087820 ~ 23095505 (+)
ppp2r5a ppp2r5a other downstream 558196 23095912 ~ 23142640 (+)
rsph3 rsph3 other downstream 654922 23192638 ~ 23196996 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) LOC110529372 NA misc NC_048572.1 CM023226.2 11883060 ~ 11914200 (-)