dtl (dtl)


Basic Information

Item Value
gene id dtl
gene name dtl
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 23087820 ~ 23095505 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU252957
CACCCCAGCTTGCTGCCTGTGCTCCCAGTGGAGCCGCCCTGCCTCTGCCCTCCAGCACCACCTCACCCATCCCTTCTCAGGGTGCtaaggctgctgctgctcgccAGAGAACACCATCTTCTATCAAACAGTGGTTATCGCCGAGCCGTGGCTCTCCTGGTCAGGTCAGCCCTTCACTCCGTAGGGTACTGAGCCCGTGTCCCCAGAGCCCGGTGAGCAGTGCCTCTCCCACAGAGCGACGGGCCAAACGCAGGCTGGAGACTGGTGACAGTCCATCTGCAGGCTGTGGGGGTGCAGAACAATGTGACTGTGTTACTGAACTCTACCCTGCGGCCAAGAGAAGCCGGGCCCTGTCTGGAATCTGCTGCCCCGCTCAAGAGAGCCAGCTACAAACAGACTGTCACACAGAGGACAACAAGCAAGTCTCATCAAGACAGACTGGCAAAGAGAATTGCTCTCCCAGGGCAAAGGACTGGCTGTCAGCGATGGGCCAAAAGATGAGGAAAGGTCAAGGAAGCCCTAGTACTGCTAGAAGCCCCAGTGCCTCTAAAAAACAAGATGGCAAGACACCAGCTTCACCGacaatccGCTCACCACAAACCACGAAGAAAATCTCCATGTATTTTACAAGAAGGCCTAATCTGGAGTGAGAGCTTGAGCCAGTCAGATGCTCTGTGCTTCTGTTTTAAAATGCtagatttttattttgagtttgttttttaaccagAACCCACAGGCAATAATACATTGCATAGAGATTGACAAAACAGTCATTCTGAATATTTGACGCTGCAGTTTTCATATCTCGAGaggctgatttatttattttaattgggCCATGGGTTTTGCAGTTGCCTCCTACACAATTTTCTGGTGCTGTGAAGAATCtctggttgaaaaaaaacaagttgcATGTTGCTAagtatatcttttattttactcaaacCTGGCAACTTCAAGAGATGCAAGAACCCAGACTTAATACATTTGTTTAGGAGGTCCACCAGGTATTAATCCTCAAGTGCAGAGAATAAATGTTTGTCTGAGGTGTGGACATTTTAAATTCACTAAAAAATACCATTTATGTGATCCTTATCTTTGAGCATTTTTATGAACTTCACTAAGCTGTATTGCTTTATCTCCTTTTGGGGTTTTTTATGTATGGGTTTGACCCTTTTCTTTGTGttacatatatacatttctgcaaaatgttttttttttttgagcaaaTGCTTATGTTTATATGTAAAAAGTTGCTTGGTTAATTTGTATTTAATTGACACAAATTTGCTCTGGTCCGATTTTATTAAATTGAAAAGAGTGTTAAAAGTGTGTGGCATGCTATCTGTTGCATATTATCAGTGTGATAAAGAGTGTTTGGAGGTCAGACACAAGTGATAGTGATGCCATGACTTTAATCATTTACTGCAGTGGTTACAAAGTTTATCTTCTTGTGACCCCTC
>XM_039780975.1
CAAGATTAGCGGGGGATTCGGTCGCTGTGGTGCGCCGAGTTGTTCGCGGgaaagacagcagcagcagcagcaaaagcAACACGGAAAAGACCACCAGCTAACGATCCGACAAACTTCTGtattatttaaaattatttcaGATCGTCCGAGTTTAGGGATGCTTTTCCGCTCAATAGTTGACAGAGGAGTGGGCAGACGAAACCAGAATGCCCTCCCTGCAGACCCCTGGCCCAGGTACCCTCTGAGCTCTGTGCTGGGAGGCTACCAGTGTGTCCGACAAGATGAACACATCTCCTATGGCAACCTGGGTGACTCTGTGCCACCGTTTGGATTGGCTTTCTCCTCTGCGGGGAACATGCAGAACATCCTTGCAGTAGCTAATGAAGAAGGCATTGTTAGGATCTACAACACAGAGAGCCGTGAAAACCCACTCCTTAAAGaATGGTTGGCTCATGAGAATGCTGTCTTTGACATAGCCTGGGTACCAGGGGAGCCTCACTTAGTGACTGCTGCCGGTGATCAGATGGCCAGGCTGTGGGATGTGAAGTCAGGGGAGATGTTAGGCAGCTTCAAGGGTCACCTCTGCAGCCTTAAGTCTGTTTCATTCACACCACAGGAGAAAGCTGTGTTCTGTACTGGGGCCAGAGATGGAAATATTATGGTCTGGGACACCAGGTGCAGTAAAAAAGATGGTTTCTACAGACAGGTGAAACAGATCAGTGGTGCTCACAACAAAGCAGAGACAAACACCCCCGCCAGAACAAAGAAGAGGCGGGGTAGCACGCGGGGCATGGCTCCCAGTGTGGACACCCAGCAGAGTGTCACAGTAGTTTTGTTTCGGGATCAGCACACCCTCATCTCCTCTGGGGCCGTTGATGGAGTGATCAAGATGTGGGATCTGAGGAAGAACTACACTGCACACCGTCAGGATCCTGTCCCGCTGCAGACGTACCCGTACCCAGGTTCTTGCATGCGCATGCGACTGGGTTATTCTGGACTTGTTCTGGACTCCACAAGATCCAACGTCATATGTAACTGCACTGATGATAGTATCTACATGTTTAATGTCAGTGGAATGAAAACGACTCCAGTGGCAGTTTTCAGTGGCCACCAGAACTCCTCATTTTATGTAAAGTCCACTATTAGCCCAGATGACCAGTTCTTGGCCAGTGGCTCAAGTGACAATAACGCATACATCTGGAAGATCTCTGATCCTAAACATCCTCCCATGATGCTCCAAGGCCATAGCGAGGAAGTGACATCTGTTGCATGGTGCCCAACAGATTTTACTAAGATTGCTTCCTGTTCTGATGACCACACTGTGCGGATCTGGAGGCTTCACCGGGAAATGGATGGAGCACAATCTTCAGTGGGAGAGGCCAATCTTGTGGGCTGGGCACGCCCTAAATCTCCCTCAagtacaaaGGGGACAACCCCTGCAAAAAGAGGACCGATTAGAGGTTTTGAGAAGGCCTGACGTCCACCCCAGCTTGCTGCCTGTGCTCCCAGTGGAGCCGCCCTGCCTCTGCCCTCCAGCACCACCTCACCCATCCCTTCTCAGGGTGCtaaggctgctgctgctcgccAGAGAACACCATCTTCTATCAAACAGTGGTTATCGCCGAGCCGTGGCTCTCCTGGTCAGGTCAGCCCTTCACTCCGTAGGGTACTGAGCCCGTGTCCCCAGAGCCCGGTGAGCAGTGCCTCTCCCACAGAGCGACGGGCCAAACGCAGGCTGGAGACTGGTGACAGTCCATCTGCAGGCTGTGGGGGTGCAGAACAATGTGACTGTGTTACTGAACTCTACCCTGCGGCCAAGAGAAGCCGGGCCCTGTCTGGAATCTGCTGCCCCGCTCAAGAGAGCCAGCTACAAACAGACTGTCACACAGAGGACAACAAGCAAGTCTCATCAAGACAGACTGGCAAAGAGAATTGCTCTCCCAGGGCAAAGGACTGGCTGTCAGCGATGGGCCAAAAGATGAGGAAAGGTCAAGGAAGCCCTAGTACTGCTAGAAGCCCCAGTGCCTCTAAAAAACAAGATGGCAAGACACCAGCTTCACCGacaatccGCTCACCACAAACCACGAAGAAAATCTCCATGTATTTTACAAGAAGGCCTAATCTGGAGTGAGAGCTTGAGCCAGTCAGATGCTCTGTGCTTCTGTTTTAAAATGCtagatttttattttgagtttgttttttaaccagAACCCACAGGCAATAATACATTGCATAGAGATTGACAAAACAGTCATTCTGAATATTTGACGCTGCAGTTTTCATATCTCGAGaggctgatttatttattttaattgggCCATGGGTTTTGCAGTTGCCTCCTACACAATTTTCTGGTGCTGTGAAGAATCtctggttgaaaaaaaacaagttgcATGTTGCTAagtatatcttttattttactcaaacCTGGCAACTTCAAGAGATGCAAGAACCCAGACTTAATACATTTGTTTAGGAGGTCCACCAGGTATTAATCCTCAAGTGCAGAGAATAAATGTTTGTCTGAGGTGTGGACATTTTAAATTCACTAAAAAATACCATTTATGTGATCCTTATCTTTGAGCATTTTTATGAACTTCACTAAGCTGTATTGCTTTATCTCCTTTTGGGGTTTTTTATGTATGGGTTTGACCCTTTTC

Function

symbol description
dtl Predicted to contribute to ubiquitin-protein transferase activity. Acts upstream of or within mitotic G2 DNA damage checkpoint signaling. Predicted to be located in centrosome and nucleus. Predicted to be part of Cul4A-RING E3 ubiquitin ligase complex and Cul4B-RING E3 ubiquitin ligase complex. Is expressed in several structures, including central nervous system; immature eye; mesoderm; optic primordium; and tail bud. Orthologous to human DTL (denticleless E3 ubiquitin protein ligase homolog).

NR:

description
denticleless protein homolog

GO:

id name namespace
GO:0007095 mitotic G2 DNA damage checkpoint biological_process

KEGG:

id description
K11790 DTL, CDT2, DCAF2; denticleless

RNA

RNA id representative length rna type GC content exon number start site end site
TU252957 False 1463 lncRNA 0.44 2 23092648 23095505
XM_039780975.1 True 2660 mRNA 0.49 15 23087820 23095221

Neighbor

gene id symbol gene type direction distance location
rhag LOC100174886 coding upstream 128561 22945509 ~ 22959259 (+)
nrbp1 LOC100699297,LOC102778226,LOC102314540,LOC103372645 coding upstream 185331 22892172 ~ 22902489 (+)
znf106b NA coding upstream 212606 22860808 ~ 22875214 (+)
ttbk2b LOC103372651,LOC104945868 coding upstream 231245 22848098 ~ 22856575 (+)
zpax1 NA coding upstream 292457 22790720 ~ 22795363 (+)
opn8c NA coding downstream 49403 23144908 ~ 23151382 (+)
tagapb NA coding downstream 64522 23160027 ~ 23186726 (+)
ezrb ezr,LOC103355633 coding downstream 103329 23198834 ~ 23237172 (+)
LOC120546473 NA coding downstream 151494 23246999 ~ 23253449 (+)
kcnk3a kcnk3,LOC102784354 coding downstream 212218 23307723 ~ 23348356 (+)
G186697 NA non-coding upstream 69020 23016957 ~ 23018800 (+)
G186641 NA non-coding upstream 240146 22846872 ~ 22847674 (+)
G186622 NA non-coding upstream 287762 22799735 ~ 22800058 (+)
G186578 rhob,LOC104947257 non-coding upstream 367927 22716970 ~ 22719893 (+)
G186506 NA non-coding upstream 550104 22535659 ~ 22537716 (+)
G186725 NA non-coding downstream 47925 23143430 ~ 23143648 (+)
G186726 NA non-coding downstream 48454 23143959 ~ 23144290 (+)
G186747 NA non-coding downstream 173293 23268798 ~ 23275460 (+)
G186842 NA non-coding downstream 325394 23420899 ~ 23432383 (+)
G186843 NA non-coding downstream 339631 23435136 ~ 23435351 (+)
si:ch211-22i13.2 NA other upstream 121810 22962033 ~ 22966010 (+)
kcns3b kcns3,LOC103372653 other upstream 277300 22807879 ~ 22810520 (+)
lin28b lin28b other upstream 786235 22280967 ~ 22301585 (+)
G186394 mycn,LOC108233328 other upstream 1022231 21985779 ~ 22065589 (+)
erh erh,LOC100699790,LOC101174968 other upstream 1140820 21944743 ~ 21947000 (+)
ppp2r5a ppp2r5a other downstream 407 23095912 ~ 23142640 (+)
rsph3 rsph3 other downstream 97133 23192638 ~ 23196996 (+)
tcte1 NA other downstream 463993 23559498 ~ 23564429 (+)
nfkbie nfkbie other downstream 482873 23578378 ~ 23589689 (+)
G186975 NA other downstream 984098 24079603 ~ 24083104 (+)

Expression


Co-expression Network