G188091


Basic Information

Item Value
gene id G188091
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 28931058 ~ 28944726 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU254770
GACTTTGGATTTCAGAAACTTTAATTCCTTTACAGACTTCTTTAAGGACCCTgagcataaaaaaatgaattttaTCTGCAGTAGTATTTCAAAACAGTAACCAACACAACATCTAATCTTTCATGTACAACAGTGAAATGTGGACTCAAATCCACTCAATTTGATGCCTTTAGGAATATATTTTGTGCTGAGACGGTTGGaattttgccacttttttacTAGATTTCATTTGATTGTATACACTTTCATATATCTAACATATGCAATAGTACTGCATGTGTCAAGGAGTCTATTTTGTGGTAAGCCTTTCACAAAGTAACATGCTACATCACTTTTACAATACATGtaattttcatacattttgagGCACTGGTATTTTTACTAAAAGCAAAGAGCTGAGTCACTGGGTTACATCCATGTTATTATGCTTTGACTATCACAGTTTATTTTCAGAGAGATGTGGTCTTAACTCTGAGAAGTGCCGACATCATTAGGTTCACAGGTGTAAGACAGTATAAATAATAGACTTCCTGTTCCTTCAAGCATACAAAAACctaatttttatatatttaaaacgCAAAGCTTTTGGATTCTGTAAGCATTTTAAAGCACTGTTGCATACTTAGTGAAGGTGTTGGTTATTGGCTGTCATTGGCTATCTAGGCCTTGGTCTTGATTCTTATTGGACAGGAGACTCCAGTCCCTCCCAGGCCACAGTATCCATTAGGGTTTTTACTCAGGTACTGCTGGTGGTAATCCTCGGCATAGTAAAATGGCTTGGCTTCGGCTATTTCTGTTGTAATCGCACCAAAACCTTCCTCCGTTAATACCTTCTGGTATTGATCTTTGGAGGCCAACGCTTCCTCGAGCTGCTGCTTCGTGTCGGTGTAGATGGCAGAGCGGTACGCTGTCCCAACATCGTTCCCCTGTCGCATCCCTAAACACGCAAAAAATGTGAATATCAAGATTTCAGCTGACTTGACCTGCATTCGTCCTCCTCAGTTCTTGGCTGAGGCAACGTCAGATCATCTGAAAACAACAGCTGACagcatttttttccaaaaatataACTTGTCTGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254770 True 1081 lncRNA 0.39 2 28931058 28944726

Neighbor

gene id symbol gene type direction distance location
LOC120547117 gpr31,LOC104934219,LOC104957175 coding upstream 6295 28917291 ~ 28924763 (+)
gpr31 NA coding upstream 24678 28902376 ~ 28906380 (+)
LOC120547119 NA coding upstream 58455 28866213 ~ 28872603 (+)
plg plg coding upstream 144240 28773325 ~ 28786818 (+)
vgll2a vgll2,LOC102778318 coding upstream 182866 28741168 ~ 28748192 (+)
slc30a2 slc30a3,LOC102796772 coding downstream 251443 29196169 ~ 29220727 (+)
LOC120546480 NA coding downstream 371033 29315759 ~ 29371150 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding downstream 916648 29861374 ~ 29875824 (+)
LOC120546867 NA coding downstream 932195 29876921 ~ 29882724 (+)
LOC120546870 NA coding downstream 950699 29895425 ~ 29943833 (+)
G188069 NA non-coding upstream 16260 28914402 ~ 28914798 (+)
G188057 NA non-coding upstream 50623 28878748 ~ 28880435 (+)
trnal-cag_2 NA non-coding upstream 278374 28652602 ~ 28652684 (+)
G187918 NA non-coding upstream 385543 28472115 ~ 28545515 (+)
LOC120546306 NA non-coding upstream 426667 28500729 ~ 28504391 (+)
G188097 NA non-coding downstream 28873 28973599 ~ 28973911 (+)
G188100 NA non-coding downstream 32244 28976970 ~ 28977625 (+)
G188101 NA non-coding downstream 34229 28978955 ~ 28981624 (+)
G188104 NA non-coding downstream 38918 28983644 ~ 28983880 (+)
G188122 NA non-coding downstream 99557 29044283 ~ 29045546 (+)
G188063 NA other upstream 39694 28886490 ~ 28891364 (+)
ttll2 ttll2 other upstream 47937 28872686 ~ 28883121 (+)
afdna afdn,LOC102779179 other upstream 281935 28539400 ~ 28649123 (+)
LOC120546215 LOC104930085 other upstream 1892830 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 2193255 26695430 ~ 26737803 (+)
trim54 trim54,LOC103375614 other downstream 166232 29110958 ~ 29132700 (+)
G188167 ucn other downstream 189445 29134171 ~ 29136917 (+)
si:ch211-245h14.1 NA other downstream 347979 29292705 ~ 29312364 (+)
G188207 clvs2,LOC107675107 other downstream 474650 29419376 ~ 29420727 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other downstream 517123 29461849 ~ 29463874 (+)

Expression


Co-expression Network