G188294


Basic Information

Item Value
gene id G188294
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 30071009 ~ 30072741 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU255014
CTCCGAGTTATCAGGACCCTCCCCCGGGGTCTGAACTTGTTAAACTGGTCCGAACCAGCTGATGTGCGATCGGAGGGGTGAGGTCAGTCTATCGCTGGAGCAACGGAGCGGCTGACAGCGTGCTAGACGTCCACAaacagtagtctcgctttgccagaccctcctccaaagtgcgccgaaggagggtctggctactccacatagcattcggggatgggaggaaaccgtgctctggtttagtggcatttctttaatccaatcagaatcgtcatgggtggcgctaaacTCCGCACGGAACCtttgcaaaatagtcgtgcgagagagaacagattggacagatagtctagctagctgtctcaatttacccttcagagatctgaggagcagtcaaccatagtcctcataaatccaccgcagcaccggagcaatcccagaagtggaacgtcaaggatatagactaacaaaCAGAGCTGGAGAACGGGCAGCACTCCTAGTTCACCCGGTCCCTCACTGTCATCGGCCCCCAGCGCAGGAACTCTATTCCTAGTCTTTCTGTCTTCACCGCCAGCAGCCCTAACCGGCTGCAAATGGACCCCCATCCTGTGAGTGCAATACCGGTGGCTTGGCAAACACCCCCGGCCCGACAACCAGAAACAAGCTCCGCTCCCCCAGAACACCATGCCACTCGCTCGGCTCTACTTTATCAGTTCAGAGTCTCAGCAatcaagtccagctgagactGATCAACTAGCAGAGTCTCTGACAGCAGCAACAATGTGGATCAGGTTGGTGGTGGTGGCTCATCGTTGTCTTTGTGGCTGTTGCAGCGCTCCTAATAATCACTGTGGCTGTCATCAGATGGAAGAGAGCTAAAGGgaacaaaacacagacagatgaAA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
TU255014 True 899 lncRNA 0.53 3 30071009 30072741

Neighbor

gene id symbol gene type direction distance location
LOC120546436 NA coding upstream 48367 30012155 ~ 30022642 (+)
LOC120546870 NA coding upstream 127176 29895425 ~ 29943833 (+)
LOC120546867 NA coding upstream 188285 29876921 ~ 29882724 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding upstream 195185 29861374 ~ 29875824 (+)
LOC120546480 NA coding upstream 699859 29315759 ~ 29371150 (+)
zfand3 zfand3,LOC104930467,LOC103365830,LOC101473384,LOC100698322,LOC106531772 coding downstream 27218 30099959 ~ 30115805 (+)
galnt14 galnt14,LOC103365833,LOC102790467 coding downstream 52722 30125463 ~ 30323344 (+)
trnat-ugu_4 NA coding downstream 300925 30373666 ~ 30373738 (+)
LOC120546909 NA coding downstream 597015 30669756 ~ 30673973 (+)
LOC120546901 NA coding downstream 742112 30814853 ~ 30821281 (+)
LOC120546872 NA non-coding upstream 14585 30054358 ~ 30056424 (+)
LOC120546873 NA non-coding upstream 35808 29940206 ~ 30035201 (+)
G188333 NA non-coding upstream 43204 30027137 ~ 30027805 (+)
G188321 NA non-coding upstream 85507 29928842 ~ 29985502 (+)
LOC120546874 NA non-coding upstream 91942 29966970 ~ 29979067 (+)
G188344 NA non-coding downstream 24985 30097726 ~ 30098348 (+)
G188345 NA non-coding downstream 26359 30099100 ~ 30099414 (+)
G188347 NA non-coding downstream 43969 30116710 ~ 30119041 (+)
G188355 NA non-coding downstream 275334 30348075 ~ 30354637 (+)
G188363 NA non-coding downstream 320441 30393182 ~ 30398950 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other upstream 425186 29645254 ~ 29645823 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 607135 29461849 ~ 29463874 (+)
G188207 clvs2,LOC107675107 other upstream 650282 29419376 ~ 29420727 (+)
si:ch211-245h14.1 NA other upstream 758645 29292705 ~ 29312364 (+)
G188167 ucn other upstream 934092 29134171 ~ 29136917 (+)
btbd9 btbd9 other downstream 11807 30084548 ~ 30097239 (+)
angel2 NA other downstream 252231 30324972 ~ 30336202 (+)
G188352 NA other downstream 538940 30611681 ~ 30882446 (+)
LOC120546905 NA other downstream 721478 30794219 ~ 30812452 (+)
hivep2a LOC103373864 other downstream 1096326 31169067 ~ 31309396 (+)

Expression


Co-expression Network