G188347


Basic Information

Item Value
gene id G188347
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 30116710 ~ 30119041 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU255092
ATGGTGATTAGCTCTGTTTTTACTGCTTAACCACGGCGTCGTGGAGGACAATACAGCCGATCCCTGCCTCTGCTCACATGGACTTAcgacaaaaattaaaaaaatacaaataaatatttaaaaaaaataaaataccacaCTAATGGACAAGAATCACTCAGATAAATCCTCTGTGTAGCAgatcctcttcttcctctttccctctcccttttttttcttttttttcttcaatttacTGAGTAGTGCTGTTTTACATAAAGGGGAATGCGACTGAATTGTGAAAAGTGAAGAGGTCTTCGCCAAAACGCcatgtattcatttaaaaatcaaAGCTTATCGCTGAGTATGTCTGTGGTTTAAGATGATCGGTCAAGAGTGCTAAATTGAATGCATAAATTACGTACtaccctttatttttttttttttttaattgttctataatttatttcttattttgtgtttgGATAGGATTAGGtgacctttttattttcagatctgggggaaaaaattaatcttgaatgtttttataatttatttttttttctcccattgaTTGCTGCCCAGGGGCTTCATTTCTGCTAGGAGTGAGCGTTCACTAAATGGAAGAGGGATGAGTTTTGTCCCACAGTTTAAATCAGTGATGTCATATTGATACACTCAGCACAAGTGAACGttggttttaaagtgctcatgttatgctttttgggctttttttccctttttattgtgttgtatatctttttgtgcacgttataggtttacaaagtgaaaaagcccaaagtcccccaaagggacttaccatctccaacagaaaacactgttcacaaactgctccaaacagctctattgtagtccagcctttacttccgcaactgacaagctagcagtacttaactgcgcatgtgcaactcccaacaaagacggaacagaagtgcgatgcctcactctgtagctaaaacggagagctcaacacaaagggtgaaaagaggagctgcagcaatgtgaaaatgaaaccacgtaaacctattctggtacaacctctaaatacaattatgaacctgaaaatgagcagaatatgagcactttaaggctGGGAAATGAACCAAAAGCTGGTTAACTTGATGTCGTAATAACACGTAAAAgcaaaaaatgcaaaacagagTTGGACAGCTGGACTCTTAACTCGCCACTTCAGCAACGCAATCAACCGCGATTTGGTTGTCTCCAGTTCAGTTAAGCAATTGGTGAACCTCATCCAGGTGTAAGAGCAAACGTGGACTTAAgacccccccacctcccccccgTGGACCCTGCGGAGGTTGTACACCGTATTGACATCACAGATTTCAAACTGCTCTTCGGTAATGATGTCTCGACGTGAATCCTTTTTATATTTGAGTtggttttcccttttttcttcaTACATTTTAGTTTGGTCATTGTTTCCGACCCTGCTCCAAATCAGCCTACGCAGTCTGAGTGCTTGGACTTTGTGCTGTGCATATTGTTCAGTTACacacttaattttttttctttgtttttcttctcaa
>TU255093
caaactgctccaaacagctctattgtagtccagcctttacttccgcaactgacaagctagcagtacttaactgcgcatgtgcaactcccaacaaagacggaacagaagtgcgatgcctcactctgtagctaaaacggagagctcaacacaaagggtgaaaagaggagctgcagcaatgtgaaaatgaaaccacgtaaacctattctggtacaacctctaaatacaattatgaacctgaaaatgagcagaatatgagcactttaaggctGGGAAATGAACCAAAAGCTGGTTAACTTGATGTCGTAATAACACGTAAAAgcaaaaaatgcaaaacagagTTGGACAGCTGGACTCTTAACTCGCCACTTCAGCAACGCAATCAACCGCGATTTGGTTGTCTCCAGTTCAGTTAAGCAATTGGTGAACCTCATCCAGGTGTAAGAGCAAACGTGGACTTAAgacccccccacctcccccccgTGGACCCTGCGGAGGTTGTACACCGTATTGACATCACAGATTTCAAACTGCTCTTCGGTAATGATGTCTCGACGTGAATCCTTTTTATATTTGAGTtggttttcccttttttcttcaTACATTTTAGTTTGGTCATTGTTTCCGACCCTGCTCCAAATCAGCCTACGCAGTCTGAGTGCTTGGACTTTGTGCTGTGCATATTGTTCAGTTACacacttaattttttttctttgtttttcttctcaagGTGTATTCTACCAAAatcaatttcttttctttttttttctttttttttgtttgtttatgacaTTGCAgaagttgactttttttttttttgcaaatttaaagaaaaatgtttggcatttagCGCATATTGTTGGTGCATTAAAAGTATAAGTTGTGATTTTGTTTAATACAGGTACGTTATCTCCATGAAATGTACTTTGCAGCATCACTGGAAATGCGATTTGATGATGTTGAATtgtatatttttgcttttttttttcaatttggaGAAACATGAAATGGTAGATTTCCTTAAATGGCAGAAAAATCAgaaagcgttttttttttttttttttttttgcaagttatCTTTGGGGGAAAAGTTGATTCAGGTGGAGAGCCCTTATAACCACACACCACTTAACTATGCTAATCCTCATGCACAAGCTATTGTTCCTTCTCCCCCCTCACCTCTCCCCACCCCCTCTCATCTTTCCCAATGAGAACACGGCGAAGGATAAAGGGAGCTTTGGAGAAATGTCGTAGCTGGTTCTGATTttgatattttgaaaaaaaaaaaacgtgttccTTTGAGTGCTAATGAGAGATGGAAGAAATGGAATATCTTTCTGTACCTTTTTAGAGAAAAACAAATTATTTAACCTTATATCAGTTTGAGTTACTTACACCCTAGCATAGAGTGGCATATTTagttaaatgtataaaaaaagcaAGAACATAATT
>TU255094
TGGGGGAAAAGTTGATTCAGGTGGAGAGCCCTTATAACCACACACCACTTAACTATGCTAATCCTCATGCACAAGCTATTGTTCCTTCTCCCCCCTCACCTCTCCCCACCCCCTCTCATCTTTCCCAATGAGAACACGGCGAAGGATAAAGGGAGCTTTGGAGAAATGTCGTAGCTGGTTCTGATTttgatattttgaaaaaaaaaaaacgtgttccTTTGAGTGCTAATGAGAGATGGAAGAAATGGAATATCTTTCTGTACCTTTTTAGAGAAAAACAAATTATTTAACCTTATATCAGTTTGAGTTACTTACACCCTAGCATAGAGTGGCATATTTagttaaatgtataaaaaaagcaAGAACATAATTctgtcctatttttttttttttccttaattTTATCGTGTTCCATTTTCTGCTAAGGAAAA

Function

GO:

id name namespace
GO:0031497 chromatin assembly biological_process
GO:0006323 DNA packaging biological_process
GO:0006325 chromatin organization biological_process
GO:0006333 chromatin assembly or disassembly biological_process
GO:0006334 nucleosome assembly biological_process
GO:0071824 protein-DNA complex subunit organization biological_process
GO:0065004 protein-DNA complex assembly biological_process
GO:0034728 nucleosome organization biological_process
GO:0071103 DNA conformation change biological_process
GO:0051276 chromosome organization biological_process
GO:0034622 cellular protein-containing complex assembly biological_process

KEGG:

id description
ko05202 Transcriptional misregulation in cancer

RNA

RNA id representative length rna type GC content exon number start site end site
TU255092 True 1550 lncRNA 0.39 1 30116710 30118259
TU255093 False 1449 lncRNA 0.38 1 30117534 30118982
TU255094 False 431 lncRNA 0.37 1 30118611 30119041

Neighbor

gene id symbol gene type direction distance location
zfand3 zfand3,LOC104930467,LOC103365830,LOC101473384,LOC100698322,LOC106531772 coding upstream 905 30099959 ~ 30115805 (+)
LOC120546869 NA coding upstream 33647 30028950 ~ 30083063 (+)
LOC120546436 NA coding upstream 94068 30012155 ~ 30022642 (+)
LOC120546870 NA coding upstream 172877 29895425 ~ 29943833 (+)
LOC120546867 NA coding upstream 233986 29876921 ~ 29882724 (+)
galnt14 galnt14,LOC103365833,LOC102790467 coding downstream 6422 30125463 ~ 30323344 (+)
trnat-ugu_4 NA coding downstream 254625 30373666 ~ 30373738 (+)
LOC120546909 NA coding downstream 550715 30669756 ~ 30673973 (+)
LOC120546901 NA coding downstream 695812 30814853 ~ 30821281 (+)
LOC120546904 NA coding downstream 707718 30826759 ~ 30830636 (+)
G188345 NA non-coding upstream 17296 30099100 ~ 30099414 (+)
G188344 NA non-coding upstream 18362 30097726 ~ 30098348 (+)
G188294 NA non-coding upstream 43969 30071009 ~ 30072741 (+)
LOC120546872 NA non-coding upstream 60286 30054358 ~ 30056424 (+)
G188333 NA non-coding upstream 88905 30027137 ~ 30027805 (+)
G188355 NA non-coding downstream 229034 30348075 ~ 30354637 (+)
G188363 NA non-coding downstream 274141 30393182 ~ 30398950 (+)
G188365 NA non-coding downstream 282680 30401721 ~ 30430492 (+)
G188367 NA non-coding downstream 292582 30411623 ~ 30435797 (+)
G188374 NA non-coding downstream 357716 30476757 ~ 30545263 (+)
btbd9 btbd9 other upstream 19471 30084548 ~ 30097239 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other upstream 470887 29645254 ~ 29645823 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 652836 29461849 ~ 29463874 (+)
G188207 clvs2,LOC107675107 other upstream 695983 29419376 ~ 29420727 (+)
si:ch211-245h14.1 NA other upstream 804346 29292705 ~ 29312364 (+)
angel2 NA other downstream 205931 30324972 ~ 30336202 (+)
G188352 NA other downstream 492640 30611681 ~ 30882446 (+)
LOC120546905 NA other downstream 675178 30794219 ~ 30812452 (+)
hivep2a LOC103373864 other downstream 1050026 31169067 ~ 31309396 (+)
LOC120546816 NA other downstream 1487013 31606054 ~ 31614522 (+)

Expression


Co-expression Network