G188367


Basic Information

Item Value
gene id G188367
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 30411623 ~ 30435797 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU255183
CCGGTCTCTATGGGTGGATGGAAGCAGTGAAGAATGGTCTGAGAGGGTCTGGGTCTGGGGTTATGTGTTATGATATGAGATCTGTGTGTGATGGCTTTTCTGTTGAGGTCTGAGAGGTTAGGGGTGGGGAGGCCAAACATTTTGGAGACGTTGTCTGTGATGTGTTTGTTCTTGTAGGAGAAAACAGTAGAGGGGGATTGGTAATAAGAGACTAAAACAGATTAATCATGAATTTAAAACTCAGTAAAAATTTATTTATGTAATCTCTCAACTCATTCAAATTCATACAGCAGCACAAAACAGTAATAAACAATGATACAATAAAAGCTGAATAATATGCACATGATCCTGCATGACATGACTGATCCGTCTTTAAATAACTGTCCCAGTCATGATCCATTTAGGTGATGAGGGTAAGGAGATCTATAAATTAAAACTTGAACAGAAAGTCTTTTCCGCAGGATGATTTAGAAAAGGGCACCCAGTAACTCAGAGTTACTGAGCcggtagtctcactttgccagaacatcctccacacgctgcggagcggaggatggtctggctagtccacacagcattctgggagaggagaaaaacgtgctctggtttattggcatttatttaaaccaatcacaattgtcatgggtggAGCTAAGCTCCGAACGAAAACGGTGCAatatagcctcgggaaggaacttgttttggtggaacgtgtgtacgttcaaaagttgttttaggagtgcaacagaaaactcagattggacagatagtctagctagctgtctggatttaccctgcagagatcagttaaccatagtcttcataaatccaccagagtttaaaattgcaacacaaagaaagcggaaggtaatggacatcggcgaaaagacataCATCCGGTGGGATTTCCTGcgacaacggagcaatcccagaagtggaacatcgagGATATAGAATACTGAGCCAGAAACCCTGAGAGCTTTCAGGTTACACAGGAAAACATACATCAATCAATAaaattaaaggaacacaccgacttattgggactttagcttattcactgtatcccccagagttagataaatccatacatacccttctcatctctgtgtgtgtcgtaactctgtctgacgcccccaccgctagcctagcttagcacggATCTTAGAGGTAACCtactccatctagcctagcttagcacagatcctagaggtaacctgctccatctagcctagcttagcacagatcctagaggtaacctgctccatctagcctagcttagcacagatcctggaggtaacctgctccatctagcctagcttagcacagatcctagaggtaacctgctccatctagcctagcttagcacagatcctggaggtaaccggctccatctagcctagcttagcacagatcctagaGgtaacctgctccatctagcctagcttagcacagatcctggaggtaacctgctccatcaagcctagcttagcacagatcctagaggtaaccagctccatctagcctagcttagcacagatcctggaggtaacctgctccatcaagcctagcttagcacagatcctagaggtaaccagctccatctagcctagcttagcccagatcctagaggtaacctgctccatctagcctagcttagcacagatcctggaggtaaccggctccatctagcctactgctcccaataagtgacaagataacgccaacattttcctgtttacatgttgtgatttgtatagtcacagcgtgtacaaataaccaggtcacatgacacacagccatatTCTAACTGTACATAcagggaactatattctcagaaaggtgaAGCAcggctacttctgctacttgggcggagtgatttgctcgcagcacctgagaagcctcGTGGCGAGGAGCTGAGAGTAACAACGGGGCTTTTCTGGTGTTGCGCTAGACAGAGCtacgacacgcacagagatgagaaggaatGTATgaacttatctaactctggaggatacggtgaataagacaaagtcccaataagtcggcgtgttcctttaataaaGTGCCTATCAGCAagtttacaaagaaaaatatatattatattttaatgttctcattcatttaaaatgaatgtcAGGTTCTTACATCTATGTTTCATATTGTGCTACTAGTTAATCTACTACACCCCCTTCTGGACAGAAAGGCATTTTACAGCAATAAATATTGaaattatcattttaaaaattatcaaaaaatatttgtaacaaaaagaaaacttgatCATATGCTCATGTAAGACCTGAAATGTAAAACTACCACTGAATTATTCCAGTGggtttgtttttatattgatacaatacattttcaaacatcATATAAAACAACCTAACCCAGGCCTTCATCATATCAAATCATATTAATCTTGTCAACAACCAGATGAAGCTTAGCTACAAGGTTTTGTCTTTTCCGTCATGCATCAATAACACTGCTGTTAATCTGGTAAAAgggttatgtaaaaaaataaataaaaaataaataaatattaaatgatCACAAGGATTTCTACTGCAGAAACAATGTTGCTAAATGGCTTCATACAGTAACACAggaacatgcaataaaccaatcagagtgtcatctcccattccctttaaaagccaggcgtgtttgtaccttggcgcattgctattatgatggaggatttgcactataatatttatatttgtaatcttttgcgtccctgtgtgtgtaacaagcatagtgtgcgtgtgCTGTGCATAAGCTttggcgcattttactaatttgctgttatacaatgaaatgctgcgctattgactttagaacaggtttttgttggtcaatggcacgatcacttccctctgcctcaagatagcaatacgccaagaatgcacctgaacacacctccctgtaagactagcaggcccatgggtgcacagatgggcgcaggtgcatttgctatttaaacaacgtgggcgctggacggaaAATTGataactgcgtcggtcttaaactagcaaagacacttgcgtcgggctttgcgctgcgctgctCAGGGTCCAAGACAGGGCCCTTGGTCTTTTTAGTAACTATCAATGTAAATACCTGTAATGCTATGAGCTGTAACTACACCGTGCTGTCTTATTTGTTTGATTTGTTGATGGTGGCGTAGAGGTCGCTGACATcagcagaggctgcagcagcagcagaaggaaGAGGAGCTTTCACGGTGCTGTAGGTCACTGCATCATCATCAGCATCAGCATCTTTACCCCGAGCctggggaaagagagggaaacagCACAACACATGAATAACACAGCAGGACGTGACGCAGCTGTGTTTGGTTGCTTGCTTGTTG
>TU255186
CCGGTCTCTATGGGTGGATGGAAGCAGTGAAGAATGGTCTGAGAGGGTCTGGGTCTGGGGTTATGTGTTATGATATGAGATCTGTGTGTGATGGCTTTTCTGTTGAGGTCTGAGAGGTTAGGGGTGGGGAGGCCAAACATTTTGGAGACGTTGTCTGTGATGTGTTTGTTCTTGTAGGAGAAAACAGTAGAGGGGGATTGGTAATAAGAGACTAAAACAGATTAATCATGAATTTAAAACTCAGTAAAAATTTATTTATGTAATCTCTCAACTCATTCAAATTCATACAGCAGCACAAAACAGTAATAAACAATGATACAATAAAAGCTGAATAATATGCACATGATCCTGCATGACATGACTGATCCGTCTTTAAATAACTGTCCCAGTCATGATCCATTTAGGTGATGAGGGTAAGGAGATCTATAAATTAAAACTTGAACAGAAAGTCTTTTCCGCAGGATGATTTAGAAAAGGGCACCCAGTAACTCAGAGTTACTGAGCcggtagtctcactttgccagaacatcctccacacgctgcggagcggaggatggtctggctagtccacacagcattctgggagaggagaaaaacgtgctctggtttattggcatttatttaaaccaatcacaattgtcatgggtggAGCTAAGCTCCGAACGAAAACGGTGCAatatagcctcgggaaggaacttgttttggtggaacgtgtgtacgttcaaaagttgttttaggagtgcaacagaaaactcagattggacagatagtctagctagctgtctggatttaccctgcagagatcagttaaccatagtcttcataaatccaccagagtttaaaattgcaacacaaagaaagcggaaggtaatggacatcggcgaaaagacataCATCCGGTGGGATTTCCTGcgacaacggagcaatcccagaagtggaacatcgagGATATAGAATACTGAGCCAGAAACCCTGAGAGCTTTCAGGTTACACAGGAAAACATACATCAATCAATAaaattaaaggaacacaccgacttattgggactttagcttattcactgtatcccccagagttagataaatccatacatacccttctcatctctgtgtgtgtcgtaactctgtctgacgcccccaccgctagcctagcttagcacggATCTTAGAGGTAACCtactccatctagcctagcttagcacagatcctagaggtaacctgctccatctagcctagcttagcacagatcctagaggtaacctgctccatctagcctagcttagcacagatcctggaggtaacctgctccatctagcctagcttagcacagatcctagaggtaacctgctccatctagcctagcttagcacagatcctggaggtaaccggctccatctagcctagcttagcacagatcctagaGgtaacctgctccatctagcctagcttagcacagatcctggaggtaacctgctccatcaagcctagcttagcacagatcctagaggtaacctgctccatctagcctagcttagcacagatcctggaggtaacctgctccatcaagcctagcttagcacagatcctagaggtaaccagctccatctagcctagcttagcccagatcctagaggtaacctgctccatctagcctagcttagcacagatcctggaggtaaccggctccatctagcctactgctcccaataagtgacaagataacgccaacattttcctgtttacatgttgtgatttgtatagtcacagcgtgtacaaataaccaggtcacatgacacacagccatatTCTAACTGTACATAcagggaactatattctcagaaaggtgaAGCAcggctacttctgctacttgggcggagtgatttgctcgcagcacctgagaagcctcGTGGCGAGGAGCTGAGAGTAACAACGGGGCTTTTCTGGTGTTGCGCTAGACAGAGCtacgacacgcacagagatgagaaggaatGTATgaacttatctaactctggaggatacggtgaataagacaaagtcccaataagtcggcgtgttcctttaataaaGTGCCTATCAGCAagtttacaaagaaaaatatatattatattttaatgttctcattcatttaaaatgaatgtcAGGTTCTTACATCTATGTTTCATATTGTGCTACTAGTTAATCTACTACACCCCCTTCTGGACAGAAAGGCATTTTACAGCAATAAATATTGaaattatcattttaaaaattatcaaaaaatatttgtaacaaaaagaaaacttgatCATATGCTCATGTAAGACCTGAAATGTAAAACTACCACTGAATTATTCCAGTGggtttgtttttatattgatacaatacattttcaaacatcATATAAAACAACCTAACCCAGGCCTTCATCATATCAAATCATATTAATCTTGTCAACAACCAGATGAAGCTTAGCTACAAGGTTTTGTCTTTTCCGTCATGCATCAATAACACTGCTGTTAATCTGGTAAAAgggttatgtaaaaaaataaataaaaaataaataaatattaaatgatCACAAGGATTTCTACTGCAGAAACAATGTTGCTAAATGGCTTCATACAGTAACACAggaacatgcaataaaccaatcagagtgtcatctcccattccctttaaaagccaggcgtgtttgtaccttggcgcattgctattatgatggaggatttgcactataatatttatatttgtaatcttttgcgtccctgtgtgtgtaacaagcatagtgtgcgtgtgCTGTGCATAAGCTttggcgcattttactaatttgctgttatacaatgaaatgctgcgctattgactttagaacaggtttttgttggtcaatggcacgatcacttccctctgcctcaagatagcaatacgccaagaatgcacctgaacacacctccctgtaagactagcaggcccatgggtgcacagatgggcgcaggtgcatttgctatttaaacaacgtgggcgctggacggaaAATTGataactgcgtcggtcttaaactagcaaagacacttgcgtcgggctttgcgctgcgctgctCAGGGTCCAAGACAGGGCCCTTGGTCTTTTTAGTAACTATCAATGTAAATACCTGTAATGCTATGAGCTGTAACTACACCGTGCTGTCTTATTTGTTTGATTTGTTGATGGTGGCGTAGAGGTCGCTGACATcagcagaggctgcagcagcagcagaaggaaGAGGAGCTTTCACGGTGCTGTAGGTCACTGCATCATCATCAGCATCAGCATCTTTACCCCGAGCctggggaaagagagggaaacagCACAACACATGAATAACACAGCAGGACGTGACGCAGCTGTGTTTGGTTGCTTGCTTGTTG

Function

GO: NA

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU255183 True 3382 lncRNA 0.43 3 30411623 30435797
TU255186 False 3382 lncRNA 0.43 3 30411623 30435797

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_4 NA coding upstream 37885 30373666 ~ 30373738 (+)
galnt14 galnt14,LOC103365833,LOC102790467 coding upstream 88279 30125463 ~ 30323344 (+)
zfand3 zfand3,LOC104930467,LOC103365830,LOC101473384,LOC100698322,LOC106531772 coding upstream 295818 30099959 ~ 30115805 (+)
LOC120546869 NA coding upstream 328560 30028950 ~ 30083063 (+)
LOC120546436 NA coding upstream 388981 30012155 ~ 30022642 (+)
LOC120546909 NA coding downstream 233959 30669756 ~ 30673973 (+)
LOC120546901 NA coding downstream 379056 30814853 ~ 30821281 (+)
LOC120546904 NA coding downstream 390962 30826759 ~ 30830636 (+)
LOC120546903 NA coding downstream 401934 30837731 ~ 30850277 (+)
LOC120546902 NA coding downstream 409258 30845055 ~ 30850277 (+)
G188363 NA non-coding upstream 12673 30393182 ~ 30398950 (+)
G188355 NA non-coding upstream 56986 30348075 ~ 30354637 (+)
G188347 NA non-coding upstream 292582 30116710 ~ 30119041 (+)
G188345 NA non-coding upstream 312209 30099100 ~ 30099414 (+)
G188344 NA non-coding upstream 313275 30097726 ~ 30098348 (+)
G188374 NA non-coding downstream 40960 30476757 ~ 30545263 (+)
LOC120546896 NA non-coding downstream 63557 30499354 ~ 30501244 (+)
LOC120546922 NA non-coding downstream 199617 30635414 ~ 30638071 (+)
G188353 NA non-coding downstream 347821 30783618 ~ 30813785 (+)
G188421 NA non-coding downstream 584784 31020581 ~ 31020954 (+)
angel2 NA other upstream 75421 30324972 ~ 30336202 (+)
btbd9 btbd9 other upstream 314384 30084548 ~ 30097239 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other upstream 765800 29645254 ~ 29645823 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 947749 29461849 ~ 29463874 (+)
G188207 clvs2,LOC107675107 other upstream 990896 29419376 ~ 29420727 (+)
G188352 NA other downstream 175884 30611681 ~ 30882446 (+)
LOC120546905 NA other downstream 358422 30794219 ~ 30812452 (+)
hivep2a LOC103373864 other downstream 733270 31169067 ~ 31309396 (+)
LOC120546816 NA other downstream 1170257 31606054 ~ 31614522 (+)
LOC120546196 LOC105017826 other downstream 1341166 31776963 ~ 31782066 (+)

Expression


Co-expression Network