G188749


Basic Information

Item Value
gene id G188749
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 31597215 ~ 31597715 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU255776
AGATTATGAATtggcagagtacctctccaccGTCAGAGATACAAGGCAGAGACAGATCCTTACCAAgtacaggctcagtgaccacagcctcGCCGTGGAGAAAGACAGGTACcggctcagtgaccacagcctcGCCGTGGAGAAAGGCCGCTACAAACAAGCATGGCTTCCAAGAGAGCAGCGGCTCTGTGGTCACTGTACGACTGGTGAGGTTGAGACAGAGATGCACTTTCTCCTATACTGTCCAAAGTTTGAACAGATAAGAAAAGGATATTTTCTACAATTTTCAAACAAAATTGCTAATTTTAGCTCCCTTAAAGACTGTGATAAACTGGCCCAGCTGCTAGGAGAAGGCCTGGCTGCTCCGCTGGCTGCCAAATACGTTGCAGCGTGCCACGACATGAGGGACAGAGAGTCAGACACCTCGCCACAATGCCCGACCTAATGTCTGTATTAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255776 True 459 lncRNA 0.50 2 31597215 31597715

Neighbor

gene id symbol gene type direction distance location
LOC120546439 NA coding upstream 10266 31582418 ~ 31586949 (+)
cnksr3 LOC103372737,LOC102212624,LOC102300107 coding upstream 21464 31507627 ~ 31575751 (+)
LOC120547352 NA coding upstream 92987 31504009 ~ 31504228 (+)
LOC120547351 NA coding upstream 96161 31500835 ~ 31501054 (+)
LOC120547350 NA coding upstream 97887 31499109 ~ 31499328 (+)
LOC120547115 prkd3,LOC103372736 coding downstream 22693 31620408 ~ 31704363 (+)
cebpz LOC104961443,LOC104960473 coding downstream 137855 31735570 ~ 31756918 (+)
nkx2.2b NA coding downstream 269179 31866894 ~ 31869296 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding downstream 283750 31881465 ~ 31884802 (+)
crnkl1 crnkl1 coding downstream 496236 32093951 ~ 32105660 (+)
G188748 NA non-coding upstream 5756 31591055 ~ 31591459 (+)
G188737 NA non-coding upstream 124217 31472777 ~ 31472998 (+)
G188736 NA non-coding upstream 138514 31458421 ~ 31458701 (+)
G188719 NA non-coding upstream 241710 31351448 ~ 31355505 (+)
G188450 NA non-coding upstream 346097 31190402 ~ 31251118 (+)
G188757 NA non-coding downstream 76990 31674705 ~ 31752206 (+)
G188761 NA non-coding downstream 105316 31703031 ~ 31703647 (+)
G188763 NA non-coding downstream 111164 31708879 ~ 31710971 (+)
G188768 NA non-coding downstream 122377 31720092 ~ 31721287 (+)
G188785 NA non-coding downstream 242091 31839806 ~ 31911299 (+)
hivep2a LOC103373864 other upstream 287819 31169067 ~ 31309396 (+)
G188352 NA other upstream 714769 30611681 ~ 30882446 (+)
LOC120546905 NA other upstream 784763 30794219 ~ 30812452 (+)
angel2 NA other upstream 1261013 30324972 ~ 30336202 (+)
btbd9 btbd9 other upstream 1499976 30084548 ~ 30097239 (+)
LOC120546816 NA other downstream 8339 31606054 ~ 31614522 (+)
LOC120546196 LOC105017826 other downstream 179248 31776963 ~ 31782066 (+)
myo6a myo6,LOC103369425 other downstream 978741 32576456 ~ 32767003 (+)
mei4 NA other downstream 1368123 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 1730377 33328092 ~ 33386989 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G2329999 NA unknown NC_050572.1 CM025859.1 41768768 ~ 41769560 (-)
bowfin (Amia calva) G13952 NA non-coding CM030122.1 CM030122.1 23347006 ~ 23347351 (-)