LOC120546816


Basic Information

Item Value
gene id LOC120546816
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 31606054 ~ 31614522 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU255785
tatctatctatctatctatctatctatctatctatccatccatccatccatccatccatccatccatccatcattaaCTGCTCCGTGTTGTGTTTCAGTGCCATGACAGCCAGTCATCCTCTAGTTGTGACGATTTTCATGGCTGCCGAGAGCTTCACAGACATGAACAAgtggaTCAGTAAACTGTCCGAAGCAGCCGAGCCGTGTGAACTGATCAACGCCAAAGAGTGCTACAGCGAAGGCAGCGATCAGGACGCTGACGAGTGTGTGGCCACTTCCTGTTCTCTGAACTCTGAGCAGGAAATAGCTGATTCTGAAAATG
>XM_039782030.1
ctatccatctatccatccatccatccatccatcattaaCTGCTCCGTGTTGTGTTTCAGTGCCATGACAGCCAGTCATCCTCTAGTTGTGACGATTTTCATGGCTGCCGAGAGCTTCACAGACATGAACAAgtggaTCAGTAAACTGTCCGAAGCAGCCGAGCCGTGTGAACTGATCAACGCCAAAGAGTGCTACAGCGAAGGCAGCGATCAGGACGCTGACGAGTGTGTGGCCACTTCCTGTTCTCTGAACTCTGAGCAGGAAATAGCTGATTCTGAAAATGGAGACGTTCCTCAGCCTCTCGGTGAGTCGTCCCCCTGCACCTCCACCTCGCCAGCTTCACCGACCAGtgaaaacagaagaagaagcacCTTGGAGGGGAGGACTTTAAGTAGAAACAGAAGAGGAAGAGCGTCATCAGAGGGCGGTGAACGCCTGTCCTGGCTGGAACCGGCCGGGCCTGACGGAGCGTCCCTCCCTCCGATCCACGTCGGAGGAGAAACGGAAGACGAGGACGTCCACGAGAAGCCCGCTGATGAGATGGAGAGCCTGTACAACGACCTGAAGGCAGCCAGCTTGTCTCCGATTGGACAGTCCAGTCGGAGGGACTTCAGAGAGTCGTTCGTCAGACGATGTCAGAACGACAAAGTCAACGACAAGCTTCACCTGCTCCGGATCCTCCAAAGCACACTGAAGGCCAAAGAGTCGGAGCTGCTGGCGTTGGAGCAGATCCTGACCGCCCCGGCCCTTGCGGCGCCCACATACAGGAAGTGGAGACTCTCCAACGCCGTGGTGCTGCAGGAGATCGCTCAACGCCACCAGGAGATCGCTCAACGCCACCAGGAGATCGCTCAACGCCACCAGGCAGCAGGAGGCGCAGCACAGCTGGGATAAACTCCGGTTCCTCGCTGAAACACTGCTGGCTGAACTGGGACCAAACTGCTAAACATGGGATCTCCATCCAGAcggcagtggtggaaagtaactaagtacattagTCCAGTACTGAAAGGGTAACTTTTCAACCTGGACACTATTCTCCCATGGGTTTGTGTCTAAGGGACTAAaaatttgaaattggtccaCCATTAAGCGAGAAACAAGCTGCACTATAACGTTAAAGGGCAGTTGCGCGCCGTCAGTTctgagtccactaaaagtgctgtttttttgccactgacaggctcagattattataatttatagatatattatatataagtgtctgtcaacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255785 False 322 TUCP 0.47 4 31606054 31610101
XM_039782030.1 True 1235 mRNA 0.53 6 31607288 31614522

Neighbor

gene id symbol gene type direction distance location
LOC120546439 NA coding upstream 19105 31582418 ~ 31586949 (+)
cnksr3 LOC103372737,LOC102212624,LOC102300107 coding upstream 30303 31507627 ~ 31575751 (+)
rps7 rps7,LOC107668222,LOC107601753,LOC107726469 coding upstream 101196 31496301 ~ 31504858 (+)
LOC120547352 NA coding upstream 101826 31504009 ~ 31504228 (+)
LOC120547351 NA coding upstream 105000 31500835 ~ 31501054 (+)
LOC120547115 prkd3,LOC103372736 coding downstream 5886 31620408 ~ 31704363 (+)
cebpz LOC104961443,LOC104960473 coding downstream 121048 31735570 ~ 31756918 (+)
nkx2.2b NA coding downstream 252372 31866894 ~ 31869296 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding downstream 266943 31881465 ~ 31884802 (+)
crnkl1 crnkl1 coding downstream 479429 32093951 ~ 32105660 (+)
G188749 NA non-coding upstream 8339 31597215 ~ 31597715 (+)
G188748 NA non-coding upstream 14595 31591055 ~ 31591459 (+)
G188737 NA non-coding upstream 133056 31472777 ~ 31472998 (+)
G188736 NA non-coding upstream 147353 31458421 ~ 31458701 (+)
G188719 NA non-coding upstream 250549 31351448 ~ 31355505 (+)
G188757 NA non-coding downstream 60183 31674705 ~ 31752206 (+)
G188761 NA non-coding downstream 88509 31703031 ~ 31703647 (+)
G188763 NA non-coding downstream 94357 31708879 ~ 31710971 (+)
G188768 NA non-coding downstream 105570 31720092 ~ 31721287 (+)
G188785 NA non-coding downstream 225284 31839806 ~ 31911299 (+)
hivep2a LOC103373864 other upstream 296658 31169067 ~ 31309396 (+)
G188352 NA other upstream 723608 30611681 ~ 30882446 (+)
LOC120546905 NA other upstream 793602 30794219 ~ 30812452 (+)
angel2 NA other upstream 1269852 30324972 ~ 30336202 (+)
btbd9 btbd9 other upstream 1508815 30084548 ~ 30097239 (+)
LOC120546196 LOC105017826 other downstream 162441 31776963 ~ 31782066 (+)
myo6a myo6,LOC103369425 other downstream 961934 32576456 ~ 32767003 (+)
mei4 NA other downstream 1351316 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 1713570 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 1785279 33399801 ~ 33416086 (+)

Expression


Co-expression Network