G188768


Basic Information

Item Value
gene id G188768
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 31720092 ~ 31721287 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU255807
cccgtttcaagtgaacgcaccgtctgtgtcgTTTTTCTGACAACGGCAGACTGTGACCCcgttacgtcccggtgttggaatcctctccagagaaatccagtcacactttactccgtttaacgttagctgtcggCATTTaatcgtgtttaatccagctgctagctaaagctaggctaacgttacctgctgtcgagtaacgctgtgtgtgtgtgtgtgtgtgtgtgtgtctctttctctgtgtgtgtgtctccgtgtgtgtgtgtgtctctctctctgtgtgtgtgtgtgtgtgtgtgtctgtgtctccgtgtgtgtgtgtgtgtctgtgtctccgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtctctgtgtgtgtgtgtgtgtgtgtctgtgtctccgtgtgtgtgtgtgtgtctgtctctctgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtctgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtctctgtgtgtgtgtgtgtctctctctttctctgtgtgtgtgtgtgtgtgtgtctgtgtctccgtgtgtgtgtgtgtgtctgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtctctgtgtgtgtgtgtgtgtctctctctttctctgtgtgtgtgtgtgtgtgtctgtgtctccgtgtgtgtgtgtgtgtgtgtctctctttctgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255807 True 775 lncRNA 0.50 2 31720092 31721287

Neighbor

gene id symbol gene type direction distance location
LOC120547115 prkd3,LOC103372736 coding upstream 15729 31620408 ~ 31704363 (+)
LOC120546439 NA coding upstream 133143 31582418 ~ 31586949 (+)
cnksr3 LOC103372737,LOC102212624,LOC102300107 coding upstream 144341 31507627 ~ 31575751 (+)
LOC120547352 NA coding upstream 215864 31504009 ~ 31504228 (+)
LOC120547351 NA coding upstream 219038 31500835 ~ 31501054 (+)
cebpz LOC104961443,LOC104960473 coding downstream 14283 31735570 ~ 31756918 (+)
nkx2.2b NA coding downstream 145607 31866894 ~ 31869296 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding downstream 160178 31881465 ~ 31884802 (+)
crnkl1 crnkl1 coding downstream 372664 32093951 ~ 32105660 (+)
cd109 NA coding downstream 390303 32111590 ~ 32145910 (+)
G188763 NA non-coding upstream 9121 31708879 ~ 31710971 (+)
G188761 NA non-coding upstream 16445 31703031 ~ 31703647 (+)
G188749 NA non-coding upstream 122377 31597215 ~ 31597715 (+)
G188748 NA non-coding upstream 128633 31591055 ~ 31591459 (+)
G188737 NA non-coding upstream 247094 31472777 ~ 31472998 (+)
G188785 NA non-coding downstream 118519 31839806 ~ 31911299 (+)
G188809 xrn2 non-coding downstream 197712 31918999 ~ 31927133 (+)
G188816 LOC106633344,LOC106098344,LOC106674933,LOC106456206,LOC108426271 non-coding downstream 225911 31947198 ~ 31952652 (+)
G188818 NA non-coding downstream 247336 31968623 ~ 31968941 (+)
G188819 NA non-coding downstream 264025 31985312 ~ 31986086 (+)
LOC120546816 NA other upstream 105570 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 410696 31169067 ~ 31309396 (+)
G188352 NA other upstream 837646 30611681 ~ 30882446 (+)
LOC120546905 NA other upstream 907640 30794219 ~ 30812452 (+)
angel2 NA other upstream 1383890 30324972 ~ 30336202 (+)
LOC120546196 LOC105017826 other downstream 55676 31776963 ~ 31782066 (+)
myo6a myo6,LOC103369425 other downstream 855169 32576456 ~ 32767003 (+)
mei4 NA other downstream 1244551 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 1606805 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 1678514 33399801 ~ 33416086 (+)

Expression


Co-expression Network