G188816 (LOC106633344,LOC106098344,LOC106674933,LOC106456206,LOC108426271)


Basic Information

Item Value
gene id G188816
gene name LOC106633344,LOC106098344,LOC106674933,LOC106456206,LOC108426271
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 31947198 ~ 31952652 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU255863
GGCGGAGAGGGGGCGGCTCACCAACAGCAGAGTCCCTCCGCCGCTCACACGGCTCATTACTCACACAGATCATACGGACAAAAGGCGGCAGGGAGGAGAAGTCACTAATGAGGAAAAGAGCAGATACTAAACGGAGTAATCAGGAGCCTCCTTACCAGCTTTTCTGCTGCTTGTGTGTCACTCAGAGACAAAGGGAAGAGATTAACCTGAGCAGAGCAGGAAGACAGACACCACAGCTGCTCGACCTCTGTCAGATGTTCTCGGTTGAACCACGAGCTCGGGGAAGCCCGTCTGTTCGTCCATGTCTCTGGTGAAGCTCAGGCCGACTGCCTCGCCGACGACCACCTCGGCCGTGGTGAACACCTCCAGGTCTCCCAGCACGTGACCCCCGACCGTCTTGCCCTCGGCGTCCGACAGGCAGATGTGGACATGGGCGTCCCGGTTCAGAGTGCCCACCAGGGAGACGATCTCGAACCGCCCGCTGAGCTGGATCACCTGAGGGGAGGGGA

Function

NR:

description
PREDICTED: bifunctional protein GlmU-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255863 True 509 lncRNA 0.60 2 31947198 31952652

Neighbor

gene id symbol gene type direction distance location
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding upstream 62396 31881465 ~ 31884802 (+)
nkx2.2b NA coding upstream 77902 31866894 ~ 31869296 (+)
cebpz LOC104961443,LOC104960473 coding upstream 190280 31735570 ~ 31756918 (+)
LOC120547115 prkd3,LOC103372736 coding upstream 242835 31620408 ~ 31704363 (+)
LOC120546439 NA coding upstream 360249 31582418 ~ 31586949 (+)
crnkl1 crnkl1 coding downstream 141299 32093951 ~ 32105660 (+)
cd109 NA coding downstream 158938 32111590 ~ 32145910 (+)
senp6a NA coding downstream 583083 32535735 ~ 32569277 (+)
nt5e NA coding downstream 1146717 33099369 ~ 33127591 (+)
bub1 NA coding downstream 1248753 33201405 ~ 33228839 (+)
G188809 xrn2 non-coding upstream 20065 31918999 ~ 31927133 (+)
G188785 NA non-coding upstream 35899 31839806 ~ 31911299 (+)
G188757 NA non-coding upstream 194992 31674705 ~ 31752206 (+)
G188818 NA non-coding downstream 15971 31968623 ~ 31968941 (+)
G188819 NA non-coding downstream 32660 31985312 ~ 31986086 (+)
G188960 NA non-coding downstream 190464 32143116 ~ 32143380 (+)
G188971 NA non-coding downstream 249610 32202262 ~ 32202553 (+)
LOC120547295 NA non-coding downstream 276034 32228686 ~ 32229327 (+)
LOC120546196 LOC105017826 other upstream 165132 31776963 ~ 31782066 (+)
LOC120546816 NA other upstream 332676 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 637802 31169067 ~ 31309396 (+)
G188352 NA other upstream 1064752 30611681 ~ 30882446 (+)
myo6a myo6,LOC103369425 other downstream 623804 32576456 ~ 32767003 (+)
mei4 NA other downstream 1013186 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 1375440 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 1447149 33399801 ~ 33416086 (+)
G189269 NA other downstream 1501344 33453996 ~ 33458768 (+)

Expression


Co-expression Network