G188818


Basic Information

Item Value
gene id G188818
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 31968623 ~ 31968941 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU255866
cacaataatcatatatgtgatgtttggcagacatccatttaaaatgtagacaatggcatataaagagcctggtttttatgtccactgaagtttctcagcttgcactctagtaacgtgtgtggtccaggtagctttgcataaaaagtggttgtcattcgcaaggctacttttacttttatactttaagtacatttcaaagcctgtactttgttacttttacttaagtaaagaagttaaatcagtacttctacttttaccagagtattttttaacacaagtatctgtacttctacttaagtacgggaagtgagtacttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255866 True 319 lncRNA 0.34 1 31968623 31968941

Neighbor

gene id symbol gene type direction distance location
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding upstream 83821 31881465 ~ 31884802 (+)
nkx2.2b NA coding upstream 99327 31866894 ~ 31869296 (+)
cebpz LOC104961443,LOC104960473 coding upstream 211705 31735570 ~ 31756918 (+)
LOC120547115 prkd3,LOC103372736 coding upstream 264260 31620408 ~ 31704363 (+)
LOC120546439 NA coding upstream 381674 31582418 ~ 31586949 (+)
crnkl1 crnkl1 coding downstream 125010 32093951 ~ 32105660 (+)
cd109 NA coding downstream 142649 32111590 ~ 32145910 (+)
senp6a NA coding downstream 566794 32535735 ~ 32569277 (+)
nt5e NA coding downstream 1130428 33099369 ~ 33127591 (+)
bub1 NA coding downstream 1232464 33201405 ~ 33228839 (+)
G188816 LOC106633344,LOC106098344,LOC106674933,LOC106456206,LOC108426271 non-coding upstream 15971 31947198 ~ 31952652 (+)
G188809 xrn2 non-coding upstream 41490 31918999 ~ 31927133 (+)
G188785 NA non-coding upstream 57324 31839806 ~ 31911299 (+)
G188768 NA non-coding upstream 247336 31720092 ~ 31721287 (+)
G188763 NA non-coding upstream 257652 31708879 ~ 31710971 (+)
G188819 NA non-coding downstream 16371 31985312 ~ 31986086 (+)
G188960 NA non-coding downstream 174175 32143116 ~ 32143380 (+)
G188971 NA non-coding downstream 233321 32202262 ~ 32202553 (+)
LOC120547295 NA non-coding downstream 259745 32228686 ~ 32229327 (+)
G188980 NA non-coding downstream 269542 32238483 ~ 32238824 (+)
LOC120546196 LOC105017826 other upstream 186557 31776963 ~ 31782066 (+)
LOC120546816 NA other upstream 354101 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 659227 31169067 ~ 31309396 (+)
G188352 NA other upstream 1086177 30611681 ~ 30882446 (+)
myo6a myo6,LOC103369425 other downstream 607515 32576456 ~ 32767003 (+)
mei4 NA other downstream 996897 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 1359151 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 1430860 33399801 ~ 33416086 (+)
G189269 NA other downstream 1485055 33453996 ~ 33458768 (+)

Expression


Co-expression Network